Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060407.seq
(570 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 102 2e-22
At5g13650.2 68418.m01585 elongation factor family protein contai... 58 4e-09
At5g13650.1 68418.m01584 elongation factor family protein contai... 56 2e-08
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 55 3e-08
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 53 1e-07
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 49 2e-06
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 47 8e-06
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 47 8e-06
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 47 1e-05
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 46 2e-05
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 46 2e-05
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 46 2e-05
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 46 2e-05
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 33 0.10
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 32 0.23
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 32 0.23
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 32 0.23
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 32 0.23
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 30 0.95
At5g17810.1 68418.m02088 homeobox-leucine zipper transcription f... 30 1.2
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 30 1.2
At3g03660.1 68416.m00369 homeobox-leucine zipper transcription f... 29 2.2
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 29 2.9
At4g16155.1 68417.m02451 dihydrolipoamide dehydrogenase 2, plast... 28 5.0
At3g20280.2 68416.m02570 PHD finger family protein contains Pfam... 28 5.0
At3g20280.1 68416.m02569 PHD finger family protein contains Pfam... 28 5.0
At1g04220.1 68414.m00412 beta-ketoacyl-CoA synthase, putative St... 27 6.7
At5g23160.1 68418.m02708 expressed protein ; expression supporte... 27 8.8
At3g16950.1 68416.m02166 dihydrolipoamide dehydrogenase 1, plast... 27 8.8
At1g33970.1 68414.m04212 avirulence-responsive protein, putative... 27 8.8
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 27 8.8
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 102 bits (244), Expect = 2e-22
Identities = 50/70 (71%), Positives = 56/70 (80%)
Frame = +1
Query: 49 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 228
MV FT DE+R +MD K NIRNMSVIAHVDHGKSTLTDSLV+ AGIIA AG+ R TDTR
Sbjct: 1 MVKFTADELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 229 KDEQDRCITL 258
DE +R IT+
Sbjct: 61 ADEAERGITI 70
Score = 72.9 bits (171), Expect = 1e-13
Identities = 38/61 (62%), Positives = 48/61 (78%)
Frame = +3
Query: 255 IKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGA 434
IKST IS+++E+ ++ L T R+ +E +LINLIDSPGHVDFSSEVTAALR+TDGA
Sbjct: 70 IKSTGISLYYEMTDESLKSFTGA--RDGNE--YLINLIDSPGHVDFSSEVTAALRITDGA 125
Query: 435 L 437
L
Sbjct: 126 L 126
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 452 CVWCVCTKPKTVLRQAIAEASSLFCS*TKWNGALLELQL 568
C+ VC + +TVLRQA+ E + K + LELQ+
Sbjct: 131 CIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQV 169
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 58.0 bits (134), Expect = 4e-09
Identities = 25/73 (34%), Positives = 47/73 (64%)
Frame = +1
Query: 40 PSKMVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFT 219
PS +V+ + +D++ N+RN++++AHVDHGK+TL DS++ +A + + + R
Sbjct: 62 PSTAEPASVEVKKKQLDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIM 121
Query: 220 DTRKDEQDRCITL 258
D+ E++R IT+
Sbjct: 122 DSNDLERERGITI 134
Score = 37.1 bits (82), Expect = 0.008
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 345 KGFLINLIDSPGHVDFSSEVTAALRVTDGAL 437
K +N+ID+PGH DF EV L + DG L
Sbjct: 144 KNTKVNIIDTPGHSDFGGEVERVLNMVDGVL 174
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 56.0 bits (129), Expect = 2e-08
Identities = 22/58 (37%), Positives = 41/58 (70%)
Frame = +1
Query: 85 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITL 258
+D++ N+RN++++AHVDHGK+TL DS++ +A + + + R D+ E++R IT+
Sbjct: 76 LDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIMDSNDLERERGITI 133
Score = 37.1 bits (82), Expect = 0.008
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 345 KGFLINLIDSPGHVDFSSEVTAALRVTDGAL 437
K +N+ID+PGH DF EV L + DG L
Sbjct: 143 KNTKVNIIDTPGHSDFGGEVERVLNMVDGVL 173
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 55.2 bits (127), Expect = 3e-08
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Frame = +1
Query: 97 RNIRNMSVIAHVDHGKSTLTDSLV--SKAGIIAGARAGETRFTDTRKDEQDRCITL 258
R +RN+ ++AHVDHGK+TL D L+ S G++ AG+ RF D +EQ R IT+
Sbjct: 7 RKVRNICILAHVDHGKTTLADHLIASSGGGVLHPRLAGKLRFMDYLDEEQRRAITM 62
Score = 47.6 bits (108), Expect = 6e-06
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = +3
Query: 345 KGFLINLIDSPGHVDFSSEVTAALRVTDGAL 437
K + +NLIDSPGH+DF SEV+ A R++DGAL
Sbjct: 72 KDYSLNLIDSPGHMDFCSEVSTAARLSDGAL 102
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/56 (46%), Positives = 36/56 (64%)
Frame = +1
Query: 100 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITLNLR 267
NIRN S+IAH+DHGKSTL D L+ G + R + +F D E++R IT+ L+
Sbjct: 85 NIRNFSIIAHIDHGKSTLADKLLQVTGTVQN-RDMKEQFLDNMDLERERGITIKLQ 139
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +3
Query: 351 FLINLIDSPGHVDFSSEVTAALRVTDGAL 437
F +NLID+PGHVDFS EV+ +L +GAL
Sbjct: 152 FCLNLIDTPGHVDFSYEVSRSLAACEGAL 180
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/69 (37%), Positives = 38/69 (55%)
Frame = +1
Query: 55 NFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKD 234
+FTV RG ++K+ N+ I HVDHGK+TLT +L I + A + D +
Sbjct: 63 SFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDEIDAAPE 122
Query: 235 EQDRCITLN 261
E+ R IT+N
Sbjct: 123 ERARGITIN 131
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 47.2 bits (107), Expect = 8e-06
Identities = 18/35 (51%), Positives = 28/35 (80%)
Frame = +3
Query: 333 EKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 437
+ K +L N++D+PGHV+FS E+TA+LR+ DGA+
Sbjct: 203 DSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAV 237
Score = 45.6 bits (103), Expect = 2e-05
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +1
Query: 79 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARA---GETRFTDTRKDEQDRC 249
G+M +RN++++ H+ HGK+ D LV + ++ A ++TDTR DEQ+R
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERN 189
Query: 250 ITLNLRP 270
I++ P
Sbjct: 190 ISIKAVP 196
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 47.2 bits (107), Expect = 8e-06
Identities = 18/35 (51%), Positives = 28/35 (80%)
Frame = +3
Query: 333 EKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 437
+ K +L N++D+PGHV+FS E+TA+LR+ DGA+
Sbjct: 203 DSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAV 237
Score = 45.6 bits (103), Expect = 2e-05
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +1
Query: 79 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARA---GETRFTDTRKDEQDRC 249
G+M +RN++++ H+ HGK+ D LV + ++ A ++TDTR DEQ+R
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERN 189
Query: 250 ITLNLRP 270
I++ P
Sbjct: 190 ISIKAVP 196
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +1
Query: 79 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARA---GETRFTDTRKDEQDRC 249
G+M +RN++++ H+ HGK+ D LV + ++ A R+TDTR DEQ+R
Sbjct: 116 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHRMSTFNAENDKHMRYTDTRVDEQERN 175
Query: 250 ITLNLRP 270
I++ P
Sbjct: 176 ISIKAVP 182
Score = 44.4 bits (100), Expect = 5e-05
Identities = 17/35 (48%), Positives = 28/35 (80%)
Frame = +3
Query: 333 EKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 437
+ K +L N++D+PG+V+FS E+TA+LR+ DGA+
Sbjct: 189 DSRSKSYLCNIMDTPGNVNFSDEMTASLRLADGAV 223
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/31 (61%), Positives = 25/31 (80%)
Frame = +3
Query: 345 KGFLINLIDSPGHVDFSSEVTAALRVTDGAL 437
K + +N+ID+PGHVDF+ EV ALRV DGA+
Sbjct: 131 KDYKVNIIDTPGHVDFTIEVERALRVLDGAI 161
Score = 33.1 bits (72), Expect = 0.13
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +1
Query: 85 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII-----AGARAGETRFTDTRKDEQDRC 249
MDK +RN+ + AH+D GK+TLT+ ++ G I R G D+ E+++
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKG 118
Query: 250 ITLNLRPSLCS 282
IT+ + C+
Sbjct: 119 ITIQSAATYCT 129
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/31 (61%), Positives = 25/31 (80%)
Frame = +3
Query: 345 KGFLINLIDSPGHVDFSSEVTAALRVTDGAL 437
K + +N+ID+PGHVDF+ EV ALRV DGA+
Sbjct: 131 KDYKVNIIDTPGHVDFTIEVERALRVLDGAI 161
Score = 33.1 bits (72), Expect = 0.13
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +1
Query: 85 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII-----AGARAGETRFTDTRKDEQDRC 249
MDK +RN+ + AH+D GK+TLT+ ++ G I R G D+ E+++
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKG 118
Query: 250 ITLNLRPSLCS 282
IT+ + C+
Sbjct: 119 ITIQSAATYCT 129
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/52 (46%), Positives = 34/52 (65%)
Frame = +1
Query: 103 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITL 258
IRN S+IAH+DHGKSTL D L+ G I G+ ++ D K +++R IT+
Sbjct: 66 IRNFSIIAHIDHGKSTLADRLMELTGTIKKGH-GQPQYLD--KLQRERGITV 114
Score = 45.6 bits (103), Expect = 2e-05
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = +3
Query: 333 EKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 437
++ G+L+NLID+PGHVDFS EV+ +L GAL
Sbjct: 129 DQEASGYLLNLIDTPGHVDFSYEVSRSLSACQGAL 163
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 45.6 bits (103), Expect = 2e-05
Identities = 26/60 (43%), Positives = 37/60 (61%)
Frame = +3
Query: 258 KSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 437
+ TA + E E++ + IT+ +K IN+ID+PGHVDF+ EV ALRV DGA+
Sbjct: 131 EGTATMDWMEQEQERGITITSAATTTFWDK-HRINIIDTPGHVDFTLEVERALRVLDGAI 189
Score = 33.5 bits (73), Expect = 0.10
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +1
Query: 97 RNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGE----TRFTDTRKDEQDRCITL 258
++ RN+ ++AH+D GK+T T+ ++ G + GE T D + EQ+R IT+
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG--RNYKIGEVHEGTATMDWMEQEQERGITI 149
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 33.5 bits (73), Expect = 0.10
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 109 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITL 258
N+ I HVDHGK+TLT ++ A+A D +E+ R IT+
Sbjct: 69 NVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITI 118
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 32.3 bits (70), Expect = 0.23
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 85 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 180
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 32.3 bits (70), Expect = 0.23
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 85 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 180
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 32.3 bits (70), Expect = 0.23
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 85 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 180
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 32.3 bits (70), Expect = 0.23
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 85 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 180
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 30.3 bits (65), Expect = 0.95
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 112 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR 213
++++ HVDHGK+TL D + K+ + A G T+
Sbjct: 504 ITIMGHVDHGKTTLLD-YIRKSKVAASEAGGITQ 536
>At5g17810.1 68418.m02088 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana};
Length = 268
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 122 SPTSITASQPSRTRWFPRPVSLLVRE 199
SP+S T+++P R RW P+P +L+ E
Sbjct: 9 SPSS-TSTEPVRARWSPKPEQILILE 33
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 109 NMSVIAHVDHGKSTLTDSLVSKAGIIA 189
N++++ HVD GKSTL+ L+ G I+
Sbjct: 241 NLAIVGHVDSGKSTLSGRLLHLLGRIS 267
>At3g03660.1 68416.m00369 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana}
Length = 199
Score = 29.1 bits (62), Expect = 2.2
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 122 SPTSITASQPSRTRWFPRPVSLLVRE 199
S + T+++P R+RW P+P +L+ E
Sbjct: 20 SASGSTSAEPVRSRWSPKPEQILILE 45
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +1
Query: 112 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAG 204
++V+ HVDHGK++L D+L + + +A AG
Sbjct: 222 VTVMGHVDHGKTSLLDALRNTS--VAAREAG 250
>At4g16155.1 68417.m02451 dihydrolipoamide dehydrogenase 2,
plastidic / lipoamide dehydrogenase 2 (PTLPD2) identical
to plastidic lipoamide dehydrogenase from Arabidopsis
thaliana [gi:7159284]
Length = 567
Score = 27.9 bits (59), Expect = 5.0
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 231 GRTRPLHHIKSTAISMFFELEEKDLVFITNPDQREKSEK-GFLINL 365
GR L+H+ A F E +V +T P REK+EK GF +++
Sbjct: 424 GRDHVLNHLSIPAAC--FTHPEISMVGLTEPQAREKAEKEGFKVSI 467
>At3g20280.2 68416.m02570 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 482
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 469 THTPDTQSTTTRAPSVTRSAAVTSEEKS 386
T PD ST T APSVT+ + + EK+
Sbjct: 388 TVVPDQDSTITAAPSVTQEDSAFNTEKT 415
>At3g20280.1 68416.m02569 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 743
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 469 THTPDTQSTTTRAPSVTRSAAVTSEEKS 386
T PD ST T APSVT+ + + EK+
Sbjct: 649 TVVPDQDSTITAAPSVTQEDSAFNTEKT 676
>At1g04220.1 68414.m00412 beta-ketoacyl-CoA synthase, putative
Strong similarity to beta-keto-Coa synthase gb|U37088
from Simmondsia chinensis, GI:4091810
Length = 528
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 455 HTVNNHKGSISDTECSCYFRREIN 384
HTV HKGS D +C ++RE N
Sbjct: 315 HTVRTHKGS-DDNAFNCVYQREDN 337
>At5g23160.1 68418.m02708 expressed protein ; expression supported
by MPSS
Length = 271
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 152 SRTRWFPRPVSLLVREPERPVSLTRVRTNK 241
+RTRWF RP +E P S+ + K
Sbjct: 49 TRTRWFSRPTKFRSKEEITPTSIYKSEKQK 78
>At3g16950.1 68416.m02166 dihydrolipoamide dehydrogenase 1,
plastidic / lipoamide dehydrogenase 1 (PTLPD1) identical
to plastidic lipoamide dehydrogenase from Arabidopsis
thaliana [gi:7159282]
Length = 570
Score = 27.1 bits (57), Expect = 8.8
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 231 GRTRPLHHIKSTAISMFFELEEKDLVFITNPDQREKSEK-GFLINLI 368
GR L+H+ A F E +V +T P +EK EK GF ++++
Sbjct: 427 GRDHVLNHLSIPAAC--FTHPEISMVGLTEPQAKEKGEKEGFKVSVV 471
>At1g33970.1 68414.m04212 avirulence-responsive protein, putative /
avirulence induced gene protein, putative / AIG protein,
putative similar to SP|P54120 AIG1 protein {Arabidopsis
thaliana}; contains Pfam profile PF04548: AIG1 family
Length = 342
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 315 TNPDQREKSEKGFLINLIDSPGHVDFSS 398
T QR E G +IN++D+PG D S+
Sbjct: 62 TCESQRVVQEDGDIINVVDTPGLFDLST 89
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +1
Query: 88 DKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 180
+KKR++ N+ I HVD GKST+ ++ +G
Sbjct: 97 NKKRHL-NVVFIGHVDAGKSTIGGQILFLSG 126
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,347,738
Number of Sequences: 28952
Number of extensions: 245396
Number of successful extensions: 805
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1102220672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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