Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060406.seq
         (557 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    27   0.32 
DQ974171-1|ABJ52811.1|  403|Anopheles gambiae serpin 14 protein.       25   2.2  
AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    23   5.1  

>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 27.5 bits (58), Expect = 0.32
 Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -2

Query: 142 KTNSVQIITYFHSTFMC-VQYLSFHLIDSFQNSMIY 38
           +TN   I  Y H  +M  V +L F LI SF N MIY
Sbjct: 252 RTNETYIKVYIHWLYMIFVYFLPFSLI-SFFNLMIY 286


>DQ974171-1|ABJ52811.1|  403|Anopheles gambiae serpin 14 protein.
          Length = 403

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = -2

Query: 286 LVRPRFPVMNTFLSNLLYESVSVSKSLSVTPIFRLRGSIAL*SSVFT 146
           L + RFP   T  S  LY++    +   V   F L+ SIA+  S+ T
Sbjct: 24  LTQLRFPYSTTNFSLSLYKAAFKPEQNVVVAPFTLQNSIAMLYSIAT 70


>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 115 YFHSTFMCVQYLSFHLIDSFQNSMIYLSFK 26
           Y+ +  +CVQY+   LI S     IYL  K
Sbjct: 212 YYSAFTLCVQYVLPILIVSMAYLRIYLKLK 241


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 519,945
Number of Sequences: 2352
Number of extensions: 9383
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)