Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060405.seq
(573 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 142 2e-35
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 138 4e-34
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 123 2e-29
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 118 5e-28
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 110 1e-25
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 62 7e-11
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 55 9e-09
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 41 1e-04
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 27 1.5
SPBC1711.13 |his2||histidinol dehydrogenase His2 |Schizosaccharo... 26 3.4
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 26 3.4
SPBC19G7.18c ||SPBC19G7.11c|sequence orphan|Schizosaccharomyces ... 25 6.0
SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|... 25 7.9
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 25 7.9
SPBC25H2.05 |egd2|nac1|nascent polypeptide-associated complex al... 25 7.9
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 142 bits (345), Expect = 2e-35
Identities = 81/169 (47%), Positives = 95/169 (56%)
Frame = +3
Query: 3 ARADTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPK 182
A DTERLIGDAAKNQVAMNP+NTIFDAKRLIGRKF+D VQ+DMKHWPF+V+S GKP
Sbjct: 41 AFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPV 100
Query: 183 IKVAYKGEDKTFFPEEVSSMVLTK*RKLPKLISAKLCRMQLSRFPRTSMTLKDKPQKMQV 362
++V YKGE KTF PEE+SSMVL K R+ + + P + + K
Sbjct: 101 LQVEYKGETKTFTPEEISSMVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAG 160
Query: 363 PSQA*TFSESSMNPXXXXXXXXXXXXXXENEMXLSXXLGGGTFDVSILT 509
P L LGGGTFDVS+LT
Sbjct: 161 LIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDLGGGTFDVSLLT 209
Score = 130 bits (313), Expect = 2e-31
Identities = 68/99 (68%), Positives = 76/99 (76%)
Frame = +2
Query: 251 EMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 430
+M+ETAEAYLG V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGL
Sbjct: 124 KMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL 183
Query: 431 DKKGTGERNVLIFXPRRRYLRRVHPYIEDXIFXVKSTAG 547
D+ GE NVLIF IE+ IF VK+TAG
Sbjct: 184 DRSNQGESNVLIFDLGGGTFDVSLLTIEEGIFEVKATAG 222
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 138 bits (335), Expect = 4e-34
Identities = 79/169 (46%), Positives = 93/169 (55%)
Frame = +3
Query: 3 ARADTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPK 182
A DTERLIGDAAKNQVAMNP+NTIFDAKRLIGR+F D VQ+DMKHWPF+V+ GKP
Sbjct: 41 AFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPL 100
Query: 183 IKVAYKGEDKTFFPEEVSSMVLTK*RKLPKLISAKLCRMQLSRFPRTSMTLKDKPQKMQV 362
I+V +KGE KTF PEE+SSMVL K R+ + + P + + K
Sbjct: 101 IQVEFKGETKTFTPEEISSMVLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAG 160
Query: 363 PSQA*TFSESSMNPXXXXXXXXXXXXXXENEMXLSXXLGGGTFDVSILT 509
P L LGGGTFDVS+LT
Sbjct: 161 LIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDLGGGTFDVSLLT 209
Score = 123 bits (297), Expect = 2e-29
Identities = 65/99 (65%), Positives = 75/99 (75%)
Frame = +2
Query: 251 EMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 430
+M+E+AEA+LG V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGL
Sbjct: 124 KMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL 183
Query: 431 DKKGTGERNVLIFXPRRRYLRRVHPYIEDXIFXVKSTAG 547
D+ E NVLIF IE+ IF VK+TAG
Sbjct: 184 DRSNQHETNVLIFDLGGGTFDVSLLTIEEGIFEVKATAG 222
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 123 bits (297), Expect = 2e-29
Identities = 68/168 (40%), Positives = 90/168 (53%)
Frame = +3
Query: 3 ARADTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPK 182
A +TERL+GDAAKNQ AMNP NT+FDAKRLIGR++ED Q D+KHWPF+V+ + G P
Sbjct: 45 AFTETERLVGDAAKNQAAMNPRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPT 104
Query: 183 IKVAYKGEDKTFFPEEVSSMVLTK*RKLPKLISAKLCRMQLSRFPRTSMTLKDKPQKMQV 362
I+V Y GE K F +E+S+MVLTK +++ + K + P + K
Sbjct: 105 IEVNYLGEKKQFTAQEISAMVLTKMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAG 164
Query: 363 PSQA*TFSESSMNPXXXXXXXXXXXXXXENEMXLSXXLGGGTFDVSIL 506
P + + L LGGGTFDVS+L
Sbjct: 165 AIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFDLGGGTFDVSLL 212
Score = 112 bits (269), Expect = 4e-26
Identities = 61/99 (61%), Positives = 70/99 (70%)
Frame = +2
Query: 251 EMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 430
+MKE +EA L K V+ AVITVPAYF+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGL
Sbjct: 128 KMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGL 187
Query: 431 DKKGTGERNVLIFXPRRRYLRRVHPYIEDXIFXVKSTAG 547
D K +NVLIF I+ +F V +TAG
Sbjct: 188 DAKSDKPKNVLIFDLGGGTFDVSLLKIQGGVFEVLATAG 226
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 118 bits (285), Expect = 5e-28
Identities = 59/99 (59%), Positives = 78/99 (78%)
Frame = +2
Query: 251 EMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 430
+MK+TAEAYLGK V +AV+TVPAYFND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGL
Sbjct: 157 KMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGL 216
Query: 431 DKKGTGERNVLIFXPRRRYLRRVHPYIEDXIFXVKSTAG 547
DK T E++++++ I++ +F V +T+G
Sbjct: 217 DKTDT-EKHIVVYDLGGGTFDVSLLSIDNGVFEVLATSG 254
Score = 102 bits (244), Expect = 4e-23
Identities = 59/169 (34%), Positives = 87/169 (51%)
Frame = +3
Query: 3 ARADTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPK 182
A + ERL+G+AAKNQ NP NTIFD KRLIGRKF++ T+ D+K +PF +V+D +P
Sbjct: 74 AFTEDERLVGEAAKNQAPSNPENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPL 133
Query: 183 IKVAYKGEDKTFFPEEVSSMVLTK*RKLPKLISAKLCRMQLSRFPRTSMTLKDKPQKMQV 362
++V G+ K F PEE+S+M+L+K ++ + K + P + + K
Sbjct: 134 VEVNVGGKKKKFTPEEISAMILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAG 193
Query: 363 PSQA*TFSESSMNPXXXXXXXXXXXXXXENEMXLSXXLGGGTFDVSILT 509
P E + + LGGGTFDVS+L+
Sbjct: 194 TIAGLNVIRIVNEPTAAAIAYGLDKTDTEKHIVV-YDLGGGTFDVSLLS 241
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 110 bits (265), Expect = 1e-25
Identities = 50/63 (79%), Positives = 58/63 (92%)
Frame = +2
Query: 251 EMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 430
+M+ETA YLGK V+NAV+TVPAYFNDSQRQATK AG I+GLNVLR++NEPTAAA+AYGL
Sbjct: 170 KMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGL 229
Query: 431 DKK 439
DKK
Sbjct: 230 DKK 232
Score = 67.3 bits (157), Expect = 1e-12
Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 1/166 (0%)
Frame = +3
Query: 12 DTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKV 191
D ERL+G +AK Q +NP NT F KRLIGR+F++ VQ D+K P+++V
Sbjct: 93 DGERLVGVSAKRQAVINPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNG---DA 149
Query: 192 AYKGEDKTFFPEEVSSMVLTK*RKLPKLISAKLCRMQLSRFPRTSMTLKDKPQKMQVPSQ 371
+ KT+ P ++ +L+K R+ K + + P D ++ +
Sbjct: 150 WLEARGKTYSPSQIGGFILSKMRETASTYLGKDVKNAVVTVP---AYFNDSQRQATKAAG 206
Query: 372 A*TFSESSMNPXXXXXXXXXXXXXXENEMXLS-XXLGGGTFDVSIL 506
A +N+ ++ LGGGTFD+SIL
Sbjct: 207 AIAGLNVLRVVNEPTAAALAYGLDKKNDAIVAVFDLGGGTFDISIL 252
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 61.7 bits (143), Expect = 7e-11
Identities = 29/62 (46%), Positives = 44/62 (70%)
Frame = +2
Query: 251 EMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 430
++K AEA L +V + VI++PA+F D QR+A +A I+GLN LR++N+ AAA+ YG+
Sbjct: 128 KIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAALTYGI 187
Query: 431 DK 436
K
Sbjct: 188 TK 189
Score = 37.9 bits (84), Expect = 0.001
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 DTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQ-ADMKHWPFEVVSDGGKPKIK 188
+ R +G+AAK+ A N NT+ KRL GR ++D ++ + ++ G K
Sbjct: 47 ERSRFLGEAAKSAEASNFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAK 106
Query: 189 VAYKGEDKTFFPEEVSSMVLTK 254
V Y E+ F ++ + TK
Sbjct: 107 VQYLNEETAFSNIQLIAAYFTK 128
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 54.8 bits (126), Expect = 9e-09
Identities = 25/71 (35%), Positives = 45/71 (63%)
Frame = +2
Query: 254 MKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 433
+ E+AE +LG V V++VP YF D+QR+A + A +GL VL++I++P A +A
Sbjct: 151 LTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAVILALMYS 210
Query: 434 KKGTGERNVLI 466
++ ++ V++
Sbjct: 211 EEVLIDKTVVV 221
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 40.7 bits (91), Expect = 1e-04
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +2
Query: 266 AEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDK 436
AE + + + V+TVP +FN+ QR +A I +VL +I++ A AI Y L +
Sbjct: 152 AEEMAHEKITDLVLTVPPHFNELQRSILLEAARILNKHVLALIDDNVAVAIEYSLSR 208
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 27.5 bits (58), Expect = 1.5
Identities = 21/93 (22%), Positives = 39/93 (41%)
Frame = +3
Query: 9 ADTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIK 188
+D E GD A + P + AK L+G+ + + D P++V+ D P +K
Sbjct: 128 SDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQVLYDRLGP-LK 186
Query: 189 VAYKGEDKTFFPEEVSSMVLTK*RKLPKLISAK 287
+ G + F + + T P++ S +
Sbjct: 187 LMIDGTVRNFIAQGLQYAGFTTFGVSPRVASLR 219
>SPBC1711.13 |his2||histidinol dehydrogenase His2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 26.2 bits (55), Expect = 3.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -3
Query: 289 SFAEISFGSFLHFVSTMELTSSG 221
S++ +S SFL +++T ELT G
Sbjct: 386 SYSGVSTDSFLKYITTQELTEEG 408
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 26.2 bits (55), Expect = 3.4
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = -3
Query: 526 EDTILDVRMDTSKVPPPRXKDKXISFSSTLFVKTVSNRSSSGFIDDSENVQA 371
E T + + TS VP + SST T S+ SSSG DS + +
Sbjct: 250 ESTFYETKSSTSSVPTQTIDSSSFT-SSTPVSLTSSSTSSSGSSQDSTTIDS 300
>SPBC19G7.18c ||SPBC19G7.11c|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 252
Score = 25.4 bits (53), Expect = 6.0
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 258 RKLPKLISAKLCRMQLSRFPRTSMTLKDKPQKMQVP-SQA*TFSESSMNP 404
RK+ + + M+ RFP +S K K Q+P S T + SS +P
Sbjct: 98 RKIQDSLIRQRTTMRQGRFPSSSSEFPPKNSKYQLPGSMPNTGASSSQDP 147
>SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 330
Score = 25.0 bits (52), Expect = 7.9
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -2
Query: 203 TLICYLDLRFASITDNLERPVLHVGLHSSIFELTSDETFGI 81
T I L + S+TDN+ER + +G + I +TS F +
Sbjct: 142 TNIALLLATYPSVTDNIER-FIFMGGSTGIGNITSQAEFNV 181
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 25.0 bits (52), Expect = 7.9
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -3
Query: 139 FMSACTVASSNLRPMRRLASNIVLLGFIATWFLAASPMRRSVSA 8
F + C N +P S V GFI W +AA P+ S +A
Sbjct: 1543 FFTICAYTFMNSQPGLEDKSRAVN-GFIRIWIMAALPIAISTAA 1585
>SPBC25H2.05 |egd2|nac1|nascent polypeptide-associated complex alpha
subunit Egd2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 25.0 bits (52), Expect = 7.9
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 248 YEMKETAEAYLGKTVQNAVITVPAYFNDSQRQATK 352
Y+ A LGK + FN+SQ+QAT+
Sbjct: 63 YKSSNNAYIVLGKVTVEDMAAQARAFNESQKQATE 97
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,358,311
Number of Sequences: 5004
Number of extensions: 46159
Number of successful extensions: 164
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 244081442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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