Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060405.seq
(573 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 140 6e-34
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 140 6e-34
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 133 8e-32
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 121 4e-28
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 85 5e-17
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 73 2e-13
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 4e-10
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 2.7
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 2.7
SB_34478| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_7062| Best HMM Match : AMP-binding (HMM E-Value=1.4e-18) 29 3.6
SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026) 28 6.2
SB_29100| Best HMM Match : TPMT (HMM E-Value=5.4e-33) 27 8.2
SB_43817| Best HMM Match : WD40 (HMM E-Value=1e-13) 27 8.2
SB_17340| Best HMM Match : 7tm_3 (HMM E-Value=0) 27 8.2
SB_6273| Best HMM Match : MAM (HMM E-Value=0) 27 8.2
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 140 bits (340), Expect = 6e-34
Identities = 77/169 (45%), Positives = 94/169 (55%)
Frame = +3
Query: 3 ARADTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPK 182
A +DTERLIGDAAKNQVAMNP NT+FDAKRLIGRKF+D V DM HWPF V+ +G +PK
Sbjct: 43 AFSDTERLIGDAAKNQVAMNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPK 102
Query: 183 IKVAYKGEDKTFFPEEVSSMVLTK*RKLPKLISAKLCRMQLSRFPRTSMTLKDKPQKMQV 362
I+V +KGE K+FFPEE+SSMVLTK ++ + + P + + K
Sbjct: 103 IQVEFKGEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAG 162
Query: 363 PSQA*TFSESSMNPXXXXXXXXXXXXXXENEMXLSXXLGGGTFDVSILT 509
P L LGGGTFDVS+LT
Sbjct: 163 TIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVSVLT 211
Score = 136 bits (328), Expect = 2e-32
Identities = 75/116 (64%), Positives = 84/116 (72%)
Frame = +2
Query: 200 G*RQNLFPRGSQFHGAYEMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN 379
G +++ FP +MKETAEAYLG V +AV+TVPAYF+DSQRQATKDAGTI+GLN
Sbjct: 109 GEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLN 168
Query: 380 VLRIINEPTAAAIAYGLDKKGTGERNVLIFXPRRRYLRRVHPYIEDXIFXVKSTAG 547
VLRIINEPTAAAIAYGLDKK ERNVLI+ IED IF VKSTAG
Sbjct: 169 VLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVSVLTIEDGIFEVKSTAG 224
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 140 bits (340), Expect = 6e-34
Identities = 77/166 (46%), Positives = 96/166 (57%)
Frame = +3
Query: 12 DTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKV 191
DTERL+GDAAKNQVA+NP NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD KPKI+V
Sbjct: 46 DTERLVGDAAKNQVALNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQV 105
Query: 192 AYKGEDKTFFPEEVSSMVLTK*RKLPKLISAKLCRMQLSRFPRTSMTLKDKPQKMQVPSQ 371
YKGE KTF EE+SSMVL K ++ + + + P + + K
Sbjct: 106 EYKGERKTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIA 165
Query: 372 A*TFSESSMNPXXXXXXXXXXXXXXENEMXLSXXLGGGTFDVSILT 509
P + L LGGGTFDVSILT
Sbjct: 166 GLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDVSILT 211
Score = 132 bits (318), Expect = 3e-31
Identities = 70/100 (70%), Positives = 80/100 (80%), Gaps = 1/100 (1%)
Frame = +2
Query: 251 EMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 430
+MKETAEAYLG+ V +AVITVPAYFNDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGL
Sbjct: 126 KMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGL 185
Query: 431 DKKGTGERNVLIFXPRRRYLRRVHPYIED-XIFXVKSTAG 547
DK +GE+NVLIF I+D +F VKSTAG
Sbjct: 186 DKSLSGEKNVLIFDLGGGTFDVSILTIDDGSLFEVKSTAG 225
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 133 bits (322), Expect = 8e-32
Identities = 73/99 (73%), Positives = 76/99 (76%)
Frame = +2
Query: 251 EMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 430
+MKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGL
Sbjct: 219 KMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGL 278
Query: 431 DKKGTGERNVLIFXPRRRYLRRVHPYIEDXIFXVKSTAG 547
DKK ERNVLIF IED IF VKST G
Sbjct: 279 DKKVGQERNVLIFDLGGGTFDVSVLSIEDGIFEVKSTHG 317
Score = 126 bits (305), Expect = 1e-29
Identities = 57/77 (74%), Positives = 65/77 (84%)
Frame = +3
Query: 3 ARADTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPK 182
A D ERL+GDAAKNQVAMNP NTIFDAKRLIGR+F+D V+ DMKHW FEVV++ G+PK
Sbjct: 43 AFTDEERLVGDAAKNQVAMNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPK 102
Query: 183 IKVAYKGEDKTFFPEEV 233
+KV YKGE KTFF EEV
Sbjct: 103 VKVEYKGETKTFFAEEV 119
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +2
Query: 251 EMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 361
+MKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG
Sbjct: 151 KMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAG 187
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 121 bits (292), Expect = 4e-28
Identities = 57/73 (78%), Positives = 67/73 (91%)
Frame = +2
Query: 251 EMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 430
+MKETAEAYLGK V +AV+TVPAYFND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+
Sbjct: 824 KMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGM 883
Query: 431 DKKGTGERNVLIF 469
DKK GE+N+L+F
Sbjct: 884 DKK-EGEKNILVF 895
Score = 111 bits (266), Expect = 5e-25
Identities = 66/164 (40%), Positives = 86/164 (52%)
Frame = +3
Query: 18 ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAY 197
ERLIGD AKNQ+ NP NT+FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V
Sbjct: 746 ERLIGDGAKNQLTTNPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKV 805
Query: 198 KGEDKTFFPEEVSSMVLTK*RKLPKLISAKLCRMQLSRFPRTSMTLKDKPQKMQVPSQA* 377
K E KTF EE+S+MVLTK ++ + K + P + + K
Sbjct: 806 KDEIKTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGL 865
Query: 378 TFSESSMNPXXXXXXXXXXXXXXENEMXLSXXLGGGTFDVSILT 509
T P E + L LGGGTFDVS+LT
Sbjct: 866 TVMRIINEPTAAAIAYGMDKKEGEKNI-LVFDLGGGTFDVSLLT 908
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 84.6 bits (200), Expect = 5e-17
Identities = 53/95 (55%), Positives = 62/95 (65%), Gaps = 26/95 (27%)
Frame = +2
Query: 251 EMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN----------------- 379
++K AEA+LG+ V+ AVITVPA+FND+QRQATKDAGTI+GL+
Sbjct: 25 QLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRR 84
Query: 380 -------VLRIINEPTAAAIAYGLDKK--GTGERN 457
VLRIINEPTAAAIAYGLDK G ERN
Sbjct: 85 RPHGRSRVLRIINEPTAAAIAYGLDKARGGKAERN 119
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 72.5 bits (170), Expect = 2e-13
Identities = 37/72 (51%), Positives = 51/72 (70%)
Frame = +2
Query: 251 EMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 430
+++ AE L TV AV++VPA F+ QR AT A +++G+ VLR+INEPTAAA+AYGL
Sbjct: 156 KLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRVINEPTAAALAYGL 215
Query: 431 DKKGTGERNVLI 466
KK G NV++
Sbjct: 216 HKK-EGVANVMV 226
Score = 56.4 bits (130), Expect = 2e-08
Identities = 46/169 (27%), Positives = 67/169 (39%), Gaps = 1/169 (0%)
Frame = +3
Query: 3 ARADTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKP 179
A D L+G+ A +Q +NP NTI+DAKR IG+ F + K + F V +D G
Sbjct: 72 AFTDKGVLVGEKALSQAEINPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNA 131
Query: 180 KIKVAYKGEDKTFFPEEVSSMVLTK*RKLPKLISAKLCRMQLSRFPRTSMTLKDKPQKMQ 359
V KG PEE+ V+ K R + + + P +K + ++
Sbjct: 132 GFLVGKKGNFTVITPEEIGGYVIKKLRTMAERNLTTTVTKAVMSVP-AEFDIKQRNATVK 190
Query: 360 VPSQA*TFSESSMNPXXXXXXXXXXXXXXENEMXLSXXLGGGTFDVSIL 506
S A +N + LGGGT DVS+L
Sbjct: 191 AASLAGITVLRVINEPTAAALAYGLHKKEGVANVMVVDLGGGTLDVSLL 239
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 61.7 bits (143), Expect = 4e-10
Identities = 28/62 (45%), Positives = 42/62 (67%)
Frame = +2
Query: 254 MKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 433
+K TAE L V + VI+VP+Y+ D QR+ DA +GLN LR++N+ TA ++AYG+
Sbjct: 184 LKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIY 243
Query: 434 KK 439
K+
Sbjct: 244 KQ 245
Score = 55.6 bits (128), Expect = 3e-08
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +3
Query: 60 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVS 236
N NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177
Query: 237 SMVLTK 254
+M+ T+
Sbjct: 178 AMLFTR 183
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/54 (42%), Positives = 36/54 (66%)
Frame = +2
Query: 269 EAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 430
E + +++ V+TVP +FN ++R+A A + GLNVL+I+N TA A+ YGL
Sbjct: 98 EQFADHPIKDVVLTVPPFFNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGL 151
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 2.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 81 RILCCWGSSPPGSWRH 34
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 2.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 81 RILCCWGSSPPGSWRH 34
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_34478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 14/63 (22%)
Frame = +2
Query: 8 SRHRASHRRCRQEPGGDEP----QQ----------HNIRCQTSHRT*VRRCYCASRHEAL 145
S R S C++ PG D+P QQ H++RC+ HR VRR Y RH
Sbjct: 10 SSRRRSQLVCKRMPGADKPVRARQQFFAEQIVLRVHHMRCEIPHRC-VRRKYRIRRHSPF 68
Query: 146 AFR 154
R
Sbjct: 69 RLR 71
>SB_7062| Best HMM Match : AMP-binding (HMM E-Value=1.4e-18)
Length = 817
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 209 QNLFPRGSQFHGAYEMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVL 385
+ L+ +Q H +E KE E + T N+ +T+P ++ Q TKD T +G ++L
Sbjct: 561 RTLYGSSAQSH-LFEDKEKGEDH-NMTSGNSAVTLPGTQAETDGQLTKDMNTQAGPSML 617
>SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026)
Length = 1080
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +2
Query: 290 VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTG 448
+ NA +T+P YF + +K G G+ + +++ I+Y LD+K TG
Sbjct: 1020 IYNAPLTLPPYFWCHPSRKSKKDGAKEGMAM--AMSKERNQEISYKLDRKWTG 1070
>SB_29100| Best HMM Match : TPMT (HMM E-Value=5.4e-33)
Length = 242
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +2
Query: 410 AAIAYGLDKKGTGERNVLI--FXPRRRYLRRVHPYIED 517
+AI +D +G+ N+L+ P RY+ H YIED
Sbjct: 150 SAIGLYIDNRGSRYANLLVSLLKPHGRYMIENHHYIED 187
>SB_43817| Best HMM Match : WD40 (HMM E-Value=1e-13)
Length = 822
Score = 27.5 bits (58), Expect = 8.2
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = -3
Query: 250 VSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMS-ACTVASSNLRPMRRLASNI 74
VST+++T G +L+ T LG+ + T S S T+ S +L PMRR +
Sbjct: 751 VSTVDVTLDGLYILAGT--TTGNLGVLNASTRSYTTLMRSHTSTITSMDLDPMRRHMGTV 808
Query: 73 VLLGFIATWFL 41
G I W L
Sbjct: 809 SADGTIRIWDL 819
>SB_17340| Best HMM Match : 7tm_3 (HMM E-Value=0)
Length = 890
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -3
Query: 295 LHSFAEISFGSFLHFVSTMELTSSG-KKVLSSPLYATLILGLPPSLTTSK 149
L S A + +FL V + +S + LSSPLY T +PP + +K
Sbjct: 212 LTSRAALPLANFLQAVRIPLVDASATSEELSSPLYKTFFRTIPPDVNQAK 261
>SB_6273| Best HMM Match : MAM (HMM E-Value=0)
Length = 4272
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1
Query: 232 SVPWCLRNEGNCRSLSRQNCAECSYHG 312
+VPWC + +C S++ Q +C + G
Sbjct: 1317 NVPWCFYHPSSCSSINPQLRRDCGWVG 1343
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,412,096
Number of Sequences: 59808
Number of extensions: 374438
Number of successful extensions: 1047
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1361520496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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