Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060405.seq
(573 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY137766-1|AAM94344.1| 78|Anopheles gambiae heat shock protein... 105 1e-24
AJ439060-13|CAD27764.1| 319|Anopheles gambiae putative transcri... 25 1.3
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 24 4.0
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 24 4.0
DQ137802-1|AAZ78363.1| 265|Anopheles gambiae female-specific do... 23 7.1
DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific doub... 23 7.1
AY903308-1|AAX48940.1| 241|Anopheles gambiae female-specific do... 23 7.1
AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific doub... 23 7.1
AJ010299-1|CAA09070.1| 722|Anopheles gambiae stat protein. 23 9.3
AF283269-1|AAG15374.1| 114|Anopheles gambiae ribosomal protein ... 23 9.3
>AY137766-1|AAM94344.1| 78|Anopheles gambiae heat shock protein 70
protein.
Length = 78
Score = 105 bits (251), Expect = 1e-24
Identities = 50/58 (86%), Positives = 54/58 (93%)
Frame = +2
Query: 296 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIF 469
+AVITVPAYFNDSQRQATKDAG I+GLNV+RIINEPTAAA+AYGLDK GERNVLIF
Sbjct: 1 DAVITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAALAYGLDKNLKGERNVLIF 58
Score = 28.3 bits (60), Expect = 0.19
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 474 LGGGTFDVSILT 509
LGGGTFDVSILT
Sbjct: 60 LGGGTFDVSILT 71
>AJ439060-13|CAD27764.1| 319|Anopheles gambiae putative
transcription factor protein.
Length = 319
Score = 25.4 bits (53), Expect = 1.3
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = +3
Query: 111 EDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTK*RKLPKLISAKL 290
E ++ D+K EV + K + + E + F E++S K+ KLI+ +
Sbjct: 218 EKLAIKVDLKEERVEVWFKNRRAKWRKQKREEQEQFSNYEINS-------KIRKLINIPV 270
Query: 291 CRMQLSRFPRTSMTLKDKPQKMQ 359
+ R +T + KDK Q+ Q
Sbjct: 271 SAQEKLRQLQTGIFAKDKQQQQQ 293
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 23.8 bits (49), Expect = 4.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 229 KSVPWCLRNEGNCRSLSRQNCAECS 303
++V W + +CRS + CAECS
Sbjct: 1815 QTVFWIGLRKHHCRSCGQIFCAECS 1839
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 23.8 bits (49), Expect = 4.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 229 KSVPWCLRNEGNCRSLSRQNCAECS 303
++V W + +CRS + CAECS
Sbjct: 1816 QTVFWIGLRKHHCRSCGQIFCAECS 1840
>DQ137802-1|AAZ78363.1| 265|Anopheles gambiae female-specific
doublesex protein protein.
Length = 265
Score = 23.0 bits (47), Expect = 7.1
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +1
Query: 286 NCAECSYHGSRVLQ*LSKTSHKR-CRY 363
NCA C HG ++ HKR C+Y
Sbjct: 40 NCARCRNHGLKI----GLKGHKRYCKY 62
>DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific
doublesex protein protein.
Length = 622
Score = 23.0 bits (47), Expect = 7.1
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +1
Query: 286 NCAECSYHGSRVLQ*LSKTSHKR-CRY 363
NCA C HG ++ HKR C+Y
Sbjct: 40 NCARCRNHGLKI----GLKGHKRYCKY 62
Score = 23.0 bits (47), Expect = 7.1
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +1
Query: 193 HIRVKTKPFSPRKSVPWCLRNEGNCRSLSRQNCAECSYHGSR 318
++ K+KP + S C R++G+C + + H SR
Sbjct: 304 NLDTKSKPSTSSSSGTGCDRDDGDCITFDDSASVVRATHASR 345
>AY903308-1|AAX48940.1| 241|Anopheles gambiae female-specific
doublesex protein protein.
Length = 241
Score = 23.0 bits (47), Expect = 7.1
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +1
Query: 286 NCAECSYHGSRVLQ*LSKTSHKR-CRY 363
NCA C HG ++ HKR C+Y
Sbjct: 40 NCARCRNHGLKI----GLKGHKRYCKY 62
>AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific
doublesex protein protein.
Length = 283
Score = 23.0 bits (47), Expect = 7.1
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +1
Query: 286 NCAECSYHGSRVLQ*LSKTSHKR-CRY 363
NCA C HG ++ HKR C+Y
Sbjct: 40 NCARCRNHGLKI----GLKGHKRYCKY 62
>AJ010299-1|CAA09070.1| 722|Anopheles gambiae stat protein.
Length = 722
Score = 22.6 bits (46), Expect = 9.3
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +2
Query: 233 QFHGAYEMKETA--EAYLGKTVQNAVITVPAYFNDSQRQATKDA 358
QFH ++K +LG +++++ P Y N+ Q DA
Sbjct: 15 QFHFLNDLKYPVLIRQHLGNWIKDSLHNAPTYTNNMQSMYELDA 58
>AF283269-1|AAG15374.1| 114|Anopheles gambiae ribosomal protein S26
protein.
Length = 114
Score = 22.6 bits (46), Expect = 9.3
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +1
Query: 244 CLRNEGNCRSLSRQNCAEC 300
C N G+ +++ NCA C
Sbjct: 10 CKHNRGHVKAVRCTNCARC 28
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 609,050
Number of Sequences: 2352
Number of extensions: 11799
Number of successful extensions: 38
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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