Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060403.seq
         (567 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   3.0  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    23   6.9  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    23   6.9  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    23   9.2  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   9.2  

>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 459 LARFHPRCQTAHRRSKQMDSTEPP 530
           L R+    +TAHR ++ MD++  P
Sbjct: 36  LGRYELEKETAHRMAESMDTSHKP 59


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 280 WKFETSKYYVTIIDAPG 330
           W +E  K+  T+I+ PG
Sbjct: 487 WNYEDYKFRTTVINMPG 503


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = -2

Query: 482 TPRVKASKACSRV*PFLEIPASNSPVPAATMSTAQSA*EVP 360
           T R  AS   S   P   IPA + PVPA      QS   +P
Sbjct: 354 TSRPVASGPTSHYYPS-HIPAGSQPVPAVVNPHQQSRPTIP 393


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 462 ARFHPRCQTAHRRSKQMDSTEPPYS 536
           ARF P   T+HR S    S+  P S
Sbjct: 344 ARFDPSALTSHRSSSANCSSAAPKS 368


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 156 KRTIEKFEXEAQEMGKGSFKYAWVLDKLKAER 251
           KR I +FE E  +      K+    D LKAER
Sbjct: 319 KRKIGEFEVERDQAAGILAKHDETYDALKAER 350


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,335
Number of Sequences: 2352
Number of extensions: 11184
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)