Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060403.seq
(567 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 166 8e-42
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 166 8e-42
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 160 6e-40
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 143 7e-35
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 136 1e-32
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 116 2e-26
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 116 2e-26
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 102 2e-22
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 73 1e-13
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 73 1e-13
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 69 3e-12
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 69 3e-12
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 69 3e-12
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 41 7e-04
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 38 0.004
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 35 0.047
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 34 0.062
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 34 0.082
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.19
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.19
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 31 0.44
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 31 0.44
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 31 0.58
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 31 0.58
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 0.58
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 1.3
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 1.8
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 1.8
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 5.4
AF022984-10|AAB69958.1| 358|Caenorhabditis elegans Hypothetical... 28 5.4
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 27 7.1
AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical ... 27 7.1
AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 27 7.1
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 27 7.1
AF016450-9|AAB65987.3| 295|Caenorhabditis elegans Serpentine re... 27 9.4
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 166 bits (404), Expect = 8e-42
Identities = 78/85 (91%), Positives = 81/85 (95%)
Frame = +1
Query: 256 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 435
GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISK
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISK 129
Query: 436 NGQTREHALLAFTLGVKQLIVGVNK 510
NGQTREHALLA TLGVKQLIV NK
Sbjct: 130 NGQTREHALLAQTLGVKQLIVACNK 154
Score = 143 bits (347), Expect = 7e-35
Identities = 66/68 (97%), Positives = 66/68 (97%)
Frame = +3
Query: 51 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEXEAQEMGKGSFKYAWVL 230
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFE EAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 231 DKLKAERE 254
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 33.9 bits (74), Expect = 0.082
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3
Query: 507 QMDSTEPPYSEPRFEEIKKE 566
+MDSTEPP+SE RF EI E
Sbjct: 154 KMDSTEPPFSEARFTEITNE 173
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 166 bits (404), Expect = 8e-42
Identities = 78/85 (91%), Positives = 81/85 (95%)
Frame = +1
Query: 256 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 435
GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISK
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISK 129
Query: 436 NGQTREHALLAFTLGVKQLIVGVNK 510
NGQTREHALLA TLGVKQLIV NK
Sbjct: 130 NGQTREHALLAQTLGVKQLIVACNK 154
Score = 143 bits (347), Expect = 7e-35
Identities = 66/68 (97%), Positives = 66/68 (97%)
Frame = +3
Query: 51 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEXEAQEMGKGSFKYAWVL 230
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFE EAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 231 DKLKAERE 254
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 33.9 bits (74), Expect = 0.082
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3
Query: 507 QMDSTEPPYSEPRFEEIKKE 566
+MDSTEPP+SE RF EI E
Sbjct: 154 KMDSTEPPFSEARFTEITNE 173
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 160 bits (389), Expect = 6e-40
Identities = 74/80 (92%), Positives = 78/80 (97%)
Frame = +1
Query: 256 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 435
GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISK
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISK 129
Query: 436 NGQTREHALLAFTLGVKQLI 495
NGQTREHALLA TLGVKQL+
Sbjct: 130 NGQTREHALLAQTLGVKQLV 149
Score = 143 bits (347), Expect = 7e-35
Identities = 66/68 (97%), Positives = 66/68 (97%)
Frame = +3
Query: 51 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEXEAQEMGKGSFKYAWVL 230
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFE EAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 231 DKLKAERE 254
DKLKAERE
Sbjct: 61 DKLKAERE 68
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 143 bits (347), Expect = 7e-35
Identities = 66/68 (97%), Positives = 66/68 (97%)
Frame = +3
Query: 51 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEXEAQEMGKGSFKYAWVL 230
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFE EAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 231 DKLKAERE 254
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 102 bits (244), Expect = 2e-22
Identities = 45/48 (93%), Positives = 48/48 (100%)
Frame = +1
Query: 256 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 399
GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 33.9 bits (74), Expect = 0.082
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3
Query: 507 QMDSTEPPYSEPRFEEIKKE 566
+MDSTEPP+SE RF EI E
Sbjct: 120 KMDSTEPPFSEARFTEITNE 139
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 136 bits (329), Expect = 1e-32
Identities = 62/67 (92%), Positives = 63/67 (94%)
Frame = +3
Query: 51 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEXEAQEMGKGSFKYAWVL 230
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFE EAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 231 DKLKAER 251
DKLK +
Sbjct: 61 DKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 116 bits (278), Expect = 2e-26
Identities = 54/85 (63%), Positives = 64/85 (75%)
Frame = +1
Query: 256 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 435
G+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G
Sbjct: 233 GVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFEN 292
Query: 436 NGQTREHALLAFTLGVKQLIVGVNK 510
GQT+EHALL +LGV QLIV VNK
Sbjct: 293 GGQTKEHALLLRSLGVTQLIVAVNK 317
Score = 83.0 bits (196), Expect = 1e-16
Identities = 36/65 (55%), Positives = 48/65 (73%)
Frame = +3
Query: 60 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEXEAQEMGKGSFKYAWVLDKL 239
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 240 KAERE 254
+ ERE
Sbjct: 227 EEERE 231
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 116 bits (278), Expect = 2e-26
Identities = 54/85 (63%), Positives = 64/85 (75%)
Frame = +1
Query: 256 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 435
G+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G
Sbjct: 251 GVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFEN 310
Query: 436 NGQTREHALLAFTLGVKQLIVGVNK 510
GQT+EHALL +LGV QLIV VNK
Sbjct: 311 GGQTKEHALLLRSLGVTQLIVAVNK 335
Score = 83.0 bits (196), Expect = 1e-16
Identities = 36/65 (55%), Positives = 48/65 (73%)
Frame = +3
Query: 60 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEXEAQEMGKGSFKYAWVLDKL 239
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 240 KAERE 254
+ ERE
Sbjct: 245 EEERE 249
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 102 bits (245), Expect = 2e-22
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +1
Query: 256 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 435
G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G +
Sbjct: 172 GKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDR 231
Query: 436 NGQTREHALLAFTLGVKQLIVGVNK 510
GQTREH++L T GVK L++ VNK
Sbjct: 232 GGQTREHSMLVKTAGVKHLVILVNK 256
Score = 77.8 bits (183), Expect = 5e-15
Identities = 34/67 (50%), Positives = 47/67 (70%)
Frame = +3
Query: 54 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEXEAQEMGKGSFKYAWVLD 233
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 234 KLKAERE 254
ERE
Sbjct: 164 TNDEERE 170
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 73.3 bits (172), Expect = 1e-13
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = +1
Query: 256 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 435
GITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 93 GITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME----- 147
Query: 436 NGQTREHALLAFTLGVKQLIVGVNK 510
QT+EH +LA +GVK + + +NK
Sbjct: 148 --QTKEHLILAKQVGVKNMAIFINK 170
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 63 KTHINIVVIGHVDSGKSTTT 122
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 73.3 bits (172), Expect = 1e-13
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = +1
Query: 256 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 435
GITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 93 GITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME----- 147
Query: 436 NGQTREHALLAFTLGVKQLIVGVNK 510
QT+EH +LA +GVK + + +NK
Sbjct: 148 --QTKEHLILAKQVGVKNMAIFINK 170
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 63 KTHINIVVIGHVDSGKSTTT 122
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 68.5 bits (160), Expect = 3e-12
Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Frame = +1
Query: 256 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 435
GITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 97 GITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP----- 151
Query: 436 NGQTREHALLAFTLGV--KQLIVGVNK 510
QTREH LLA +GV ++V +NK
Sbjct: 152 --QTREHLLLARQVGVPLDNIVVFMNK 176
Score = 37.9 bits (84), Expect = 0.005
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +3
Query: 57 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEXEAQEMGKGSFKYAWV 227
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 104
Query: 228 LDKLKAEREXYH 263
L+ A+R H
Sbjct: 105 LEYETAKRHYAH 116
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 68.5 bits (160), Expect = 3e-12
Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Frame = +1
Query: 256 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 435
GITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 98 GITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP----- 152
Query: 436 NGQTREHALLAFTLGV--KQLIVGVNK 510
QTREH LLA +GV ++V +NK
Sbjct: 153 --QTREHLLLARQVGVPLDNIVVFMNK 177
Score = 37.9 bits (84), Expect = 0.005
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +3
Query: 57 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEXEAQEMGKGSFKYAWV 227
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 228 LDKLKAEREXYH 263
L+ A+R H
Sbjct: 106 LEYETAKRHYAH 117
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 68.5 bits (160), Expect = 3e-12
Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Frame = +1
Query: 256 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 435
GITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 98 GITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP----- 152
Query: 436 NGQTREHALLAFTLGV--KQLIVGVNK 510
QTREH LLA +GV ++V +NK
Sbjct: 153 --QTREHLLLARQVGVPLDNIVVFMNK 177
Score = 37.9 bits (84), Expect = 0.005
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +3
Query: 57 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEXEAQEMGKGSFKYAWV 227
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 228 LDKLKAEREXYH 263
L+ A+R H
Sbjct: 106 LEYETAKRHYAH 117
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 40.7 bits (91), Expect = 7e-04
Identities = 33/86 (38%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 GITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 432
GIT I + E +K VT +D PGH F G AD VL+VAA G E
Sbjct: 188 GITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE---- 243
Query: 433 KNGQTREHALLAFTLGVKQLIVGVNK 510
QT + A V QL+V VNK
Sbjct: 244 ---QTAQSIKFAKDANV-QLVVAVNK 265
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 38.3 bits (85), Expect = 0.004
Identities = 25/86 (29%), Positives = 43/86 (50%)
Frame = +1
Query: 307 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 486
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 487 QLIVGVNKWIPLNHHTVSPDLRKSRR 564
++I+ +NK +S +K R+
Sbjct: 127 RVIIVLNKCDLAEKSKISESAKKVRK 152
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 72 INIVVIGHVDSGKSTTT 122
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 34.7 bits (76), Expect = 0.047
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -2
Query: 515 IHLFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 381
++LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 11 LNLFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 34.3 bits (75), Expect = 0.062
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGI 152
NI VI HVD+GK+T T L+Y G I
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI 52
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +1
Query: 256 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 411
GIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 75 GITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 33.9 bits (74), Expect = 0.082
Identities = 26/85 (30%), Positives = 37/85 (43%)
Frame = +1
Query: 256 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 435
GIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 87 GITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG-------V 139
Query: 436 NGQTREHALLAFTLGVKQLIVGVNK 510
QT + LAF + Q+I +NK
Sbjct: 140 QAQTIANFWLAFEKNI-QIIPVINK 163
Score = 32.7 bits (71), Expect = 0.19
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGI---DKRTIEKFEXEAQ 191
N ++ HVD GKST L+ CG + K+ ++K + E +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERE 85
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 33.1 bits (72), Expect = 0.14
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGID 155
NI + H+DSGK+T T ++Y G ID
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID 72
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +1
Query: 256 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 411
GITI A + + IID PGH DF + D AVL++ G G
Sbjct: 97 GITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG 147
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.19
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 51 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 146
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 262 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 411
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.19
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 51 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 146
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 262 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 411
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 31.5 bits (68), Expect = 0.44
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +1
Query: 247 SVXGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 411
S+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 183 SIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 31.5 bits (68), Expect = 0.44
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +1
Query: 247 SVXGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 411
S+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 58 SIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 31.1 bits (67), Expect = 0.58
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 27 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 137
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 31.1 bits (67), Expect = 0.58
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 27 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 137
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 31.1 bits (67), Expect = 0.58
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +1
Query: 304 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 483
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 484 KQLIVGVNK 510
L++ NK
Sbjct: 182 NHLMILQNK 190
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 313 IIDAPGHRDFIKNMITGTSQADCAVLIV 396
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 153 DKRTIEKFEXEAQEMGKGSFKYAWVLDKLKAEREXY 260
+KR ++ E E + F Y LDK+K ER+ Y
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERDCY 307
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 153 DKRTIEKFEXEAQEMGKGSFKYAWVLDKLKAEREXY 260
+KR ++ E E + F Y LDK+K ER+ Y
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERDCY 242
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 72 INIVVIGHVDSGKSTTT 122
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 307 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 402
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>AF022984-10|AAB69958.1| 358|Caenorhabditis elegans Hypothetical
protein ZK488.1 protein.
Length = 358
Score = 27.9 bits (59), Expect = 5.4
Identities = 25/94 (26%), Positives = 41/94 (43%)
Frame = +1
Query: 277 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 456
++KFE+S + +T + K ITGT VL+V+ +F K+ Q
Sbjct: 104 VYKFESSLHRLTFGLTKSRTEDYKTKITGTLGKLQIVLVVSEAFWKFLNKRYKSAQIFFA 163
Query: 457 ALLAFTLGVKQLIVGVNKWIPLNHHTVSPDLRKS 558
F L + + I + W L+ H+ + RKS
Sbjct: 164 FFPNFQLKILECIWHI--WATLDRHSATAVYRKS 195
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 307 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 396
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 307 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 396
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
>AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical
protein Y59A8B.9 protein.
Length = 187
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 147 GIDKRTIEKFEXEAQEMGKGSFKYAWVLDKLKAEREXYHNRYCSLEV 287
G+D T K + E +E+ + + V+ L+ ER+ Y ++ ++EV
Sbjct: 98 GVDMATFNKLKEELEEVTRQLTESDNVIASLEKERDFYFSKLRTIEV 144
>AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical
protein Y59A8B.7 protein.
Length = 316
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 147 GIDKRTIEKFEXEAQEMGKGSFKYAWVLDKLKAEREXYHNRYCSLEV 287
G+D T K + E +E+ + + V+ L+ ER+ Y ++ ++EV
Sbjct: 227 GVDMATFNKLKEELEEVTRQLTESDNVIASLEKERDFYFSKLRTIEV 273
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 27.5 bits (58), Expect = 7.1
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Frame = -1
Query: 492 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 334
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 333 VSRSINDGNI 304
S S +D I
Sbjct: 84 FSGSKSDAEI 93
>AF016450-9|AAB65987.3| 295|Caenorhabditis elegans Serpentine
receptor, class t protein69 protein.
Length = 295
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -1
Query: 531 MVVQWNPFVYSYDELFDTEGESEQGMLTGLTVL 433
MV+ W+P ++S D + Q +L GL ++
Sbjct: 218 MVIIWHPTLFSLLSFIDMSNKRNQAILNGLWII 250
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,679,591
Number of Sequences: 27780
Number of extensions: 255608
Number of successful extensions: 790
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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