Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060403.seq
(567 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 178 4e-47
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 178 4e-47
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 174 4e-46
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 170 7e-45
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 33 0.002
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.93
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 2.1
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.1
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 2.8
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 21 6.5
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 8.6
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 21 8.6
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 178 bits (433), Expect = 4e-47
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +1
Query: 256 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 435
GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK
Sbjct: 13 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 72
Query: 436 NGQTREHALLAFTLGVKQLIVGVNK 510
NGQTREHALLAFTLGVKQLIVGVNK
Sbjct: 73 NGQTREHALLAFTLGVKQLIVGVNK 97
Score = 42.3 bits (95), Expect = 3e-06
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +3
Query: 507 QMDSTEPPYSEPRFEEIKKE 566
+MDSTEPPYSE RFEEIKKE
Sbjct: 97 KMDSTEPPYSETRFEEIKKE 116
Score = 27.5 bits (58), Expect = 0.099
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 222 WVLDKLKAERE 254
WVLDKLKAERE
Sbjct: 1 WVLDKLKAERE 11
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 178 bits (433), Expect = 4e-47
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +1
Query: 256 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 435
GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK
Sbjct: 70 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 129
Query: 436 NGQTREHALLAFTLGVKQLIVGVNK 510
NGQTREHALLAFTLGVKQLIVGVNK
Sbjct: 130 NGQTREHALLAFTLGVKQLIVGVNK 154
Score = 143 bits (346), Expect = 1e-36
Identities = 66/68 (97%), Positives = 66/68 (97%)
Frame = +3
Query: 51 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEXEAQEMGKGSFKYAWVL 230
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFE EAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 231 DKLKAERE 254
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 42.3 bits (95), Expect = 3e-06
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +3
Query: 507 QMDSTEPPYSEPRFEEIKKE 566
+MDSTEPPYSE RFEEIKKE
Sbjct: 154 KMDSTEPPYSETRFEEIKKE 173
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 174 bits (424), Expect = 4e-46
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +1
Query: 256 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 435
GITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG GEFEAGISK
Sbjct: 70 GITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISK 129
Query: 436 NGQTREHALLAFTLGVKQLIVGVNK 510
NGQTREHALLAFTLGVKQLIVGVNK
Sbjct: 130 NGQTREHALLAFTLGVKQLIVGVNK 154
Score = 143 bits (346), Expect = 1e-36
Identities = 66/68 (97%), Positives = 66/68 (97%)
Frame = +3
Query: 51 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEXEAQEMGKGSFKYAWVL 230
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFE EAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 231 DKLKAERE 254
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 39.1 bits (87), Expect = 3e-05
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +3
Query: 507 QMDSTEPPYSEPRFEEIKKE 566
+MD T+PPYSE RFEEIKKE
Sbjct: 154 KMDMTDPPYSEARFEEIKKE 173
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 170 bits (414), Expect = 7e-45
Identities = 81/81 (100%), Positives = 81/81 (100%)
Frame = +1
Query: 268 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 447
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 448 REHALLAFTLGVKQLIVGVNK 510
REHALLAFTLGVKQLIVGVNK
Sbjct: 61 REHALLAFTLGVKQLIVGVNK 81
Score = 42.3 bits (95), Expect = 3e-06
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +3
Query: 507 QMDSTEPPYSEPRFEEIKKE 566
+MDSTEPPYSE RFEEIKKE
Sbjct: 81 KMDSTEPPYSETRFEEIKKE 100
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 33.1 bits (72), Expect = 0.002
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +1
Query: 307 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 411
VT +D PGH FI G D VL+VAA G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
Score = 25.4 bits (53), Expect = 0.40
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 63 KTHINIVVIGHVDSGKST 116
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.93
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 72 INIVVIGHVDSGKST 116
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.0 bits (47), Expect = 2.1
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 64 FSLPIFG*SRITNCV*Y 14
FSLPIFG I +C+ Y
Sbjct: 57 FSLPIFGTRWIFSCIGY 73
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 292 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 393
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 2.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 292 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 393
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 21.4 bits (43), Expect = 6.5
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -1
Query: 306 IVLASFELPESNIDCDTXHAQPLVCPIPKHI*RILY 199
IV+ FE+ +S D A IP ++ R+L+
Sbjct: 54 IVIGGFEIEKSEDDSFNNQADKSEKRIPLYVCRVLH 89
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 8.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 453 LTGLTVLRDTSFEFTGTGSYDEHSAISLR 367
LTGLTVLR + + S E S R
Sbjct: 257 LTGLTVLRTFNASYNSLDSLPEGLFASTR 285
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 563 LLDFLKSGLTVWWFSGIH 510
L F++SG+T W S I+
Sbjct: 56 LSHFIESGITAIWLSPIN 73
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,896
Number of Sequences: 438
Number of extensions: 3006
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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