Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060403.seq
(567 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 154 4e-38
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 154 4e-38
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 154 4e-38
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 154 4e-38
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 100 8e-22
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 94 5e-20
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 72 3e-13
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 69 3e-12
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 38 0.004
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 38 0.004
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 38 0.005
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 38 0.005
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 36 0.025
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 36 0.025
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 35 0.033
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 35 0.044
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 33 0.13
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.13
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.18
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 33 0.18
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 31 0.54
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.2
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.2
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.2
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 1.6
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 1.6
At5g46380.1 68418.m05708 hypothetical protein 28 5.0
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 28 5.0
At4g20430.1 68417.m02981 subtilase family protein contains Pfam ... 27 8.7
At4g10890.1 68417.m01772 expressed protein 27 8.7
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 154 bits (373), Expect = 4e-38
Identities = 72/85 (84%), Positives = 78/85 (91%)
Frame = +1
Query: 256 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 435
GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISK 129
Query: 436 NGQTREHALLAFTLGVKQLIVGVNK 510
+GQTREHALLAFTLGVKQ+I NK
Sbjct: 130 DGQTREHALLAFTLGVKQMICCCNK 154
Score = 127 bits (307), Expect = 4e-30
Identities = 60/68 (88%), Positives = 61/68 (89%)
Frame = +3
Query: 51 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEXEAQEMGKGSFKYAWVL 230
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FE EA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 231 DKLKAERE 254
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 507 QMDSTEPPYSEPRFEEIKKE 566
+MD+T P YS+ R++EI KE
Sbjct: 154 KMDATTPKYSKARYDEIIKE 173
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 154 bits (373), Expect = 4e-38
Identities = 72/85 (84%), Positives = 78/85 (91%)
Frame = +1
Query: 256 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 435
GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISK 129
Query: 436 NGQTREHALLAFTLGVKQLIVGVNK 510
+GQTREHALLAFTLGVKQ+I NK
Sbjct: 130 DGQTREHALLAFTLGVKQMICCCNK 154
Score = 127 bits (307), Expect = 4e-30
Identities = 60/68 (88%), Positives = 61/68 (89%)
Frame = +3
Query: 51 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEXEAQEMGKGSFKYAWVL 230
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FE EA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 231 DKLKAERE 254
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 507 QMDSTEPPYSEPRFEEIKKE 566
+MD+T P YS+ R++EI KE
Sbjct: 154 KMDATTPKYSKARYDEIIKE 173
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 154 bits (373), Expect = 4e-38
Identities = 72/85 (84%), Positives = 78/85 (91%)
Frame = +1
Query: 256 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 435
GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISK 129
Query: 436 NGQTREHALLAFTLGVKQLIVGVNK 510
+GQTREHALLAFTLGVKQ+I NK
Sbjct: 130 DGQTREHALLAFTLGVKQMICCCNK 154
Score = 127 bits (307), Expect = 4e-30
Identities = 60/68 (88%), Positives = 61/68 (89%)
Frame = +3
Query: 51 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEXEAQEMGKGSFKYAWVL 230
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FE EA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 231 DKLKAERE 254
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 507 QMDSTEPPYSEPRFEEIKKE 566
+MD+T P YS+ R++EI KE
Sbjct: 154 KMDATTPKYSKARYDEIIKE 173
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 154 bits (373), Expect = 4e-38
Identities = 72/85 (84%), Positives = 78/85 (91%)
Frame = +1
Query: 256 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 435
GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISK 129
Query: 436 NGQTREHALLAFTLGVKQLIVGVNK 510
+GQTREHALLAFTLGVKQ+I NK
Sbjct: 130 DGQTREHALLAFTLGVKQMICCCNK 154
Score = 127 bits (307), Expect = 4e-30
Identities = 60/68 (88%), Positives = 61/68 (89%)
Frame = +3
Query: 51 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEXEAQEMGKGSFKYAWVL 230
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FE EA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 231 DKLKAERE 254
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 507 QMDSTEPPYSEPRFEEIKKE 566
+MD+T P YS+ R++EI KE
Sbjct: 154 KMDATTPKYSKARYDEIIKE 173
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 100 bits (239), Expect = 8e-22
Identities = 48/93 (51%), Positives = 62/93 (66%)
Frame = +1
Query: 232 TN*RLSVXGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 411
TN + G T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A G
Sbjct: 156 TNEEERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKG 215
Query: 412 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 510
EFE G + GQTREH LA TLGV +LIV VNK
Sbjct: 216 EFETGYERGGQTREHVQLAKTLGVSKLIVVVNK 248
Score = 65.7 bits (153), Expect = 2e-11
Identities = 27/64 (42%), Positives = 45/64 (70%)
Frame = +3
Query: 60 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEXEAQEMGKGSFKYAWVLDKL 239
+K H+N+V IGHVD+GKST G +++ G +D R I+K+E EA++ + S+ A+++D
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 240 KAER 251
+ ER
Sbjct: 158 EEER 161
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 94.3 bits (224), Expect = 5e-20
Identities = 41/86 (47%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 435
GIT+ +A+ F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEAG
Sbjct: 302 GITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDN 361
Query: 436 -NGQTREHALLAFTLGVKQLIVGVNK 510
GQTREHA + GV+Q+IV +NK
Sbjct: 362 LKGQTREHARVLRGFGVEQVIVAINK 387
Score = 74.9 bits (176), Expect = 3e-14
Identities = 31/63 (49%), Positives = 45/63 (71%)
Frame = +3
Query: 66 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEXEAQEMGKGSFKYAWVLDKLKA 245
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+E EA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 246 ERE 254
ERE
Sbjct: 298 ERE 300
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 71.7 bits (168), Expect = 3e-13
Identities = 36/85 (42%), Positives = 52/85 (61%)
Frame = +1
Query: 256 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 435
GITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+ G
Sbjct: 127 GITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP----- 181
Query: 436 NGQTREHALLAFTLGVKQLIVGVNK 510
QT+EH LLA +GV ++V +NK
Sbjct: 182 --QTKEHILLAKQVGVPDMVVFLNK 204
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 48 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFE 179
K ++K H+NI IGHVD GK+T T L I +K++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYD 115
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 68.5 bits (160), Expect = 3e-12
Identities = 36/85 (42%), Positives = 51/85 (60%)
Frame = +1
Query: 256 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 435
GITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+ G
Sbjct: 115 GITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP----- 169
Query: 436 NGQTREHALLAFTLGVKQLIVGVNK 510
QT+EH LLA +GV L+ +NK
Sbjct: 170 --QTKEHILLARQVGVPSLVCFLNK 192
Score = 32.7 bits (71), Expect = 0.18
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 57 KEKTHINIVVIGHVDSGKSTTT 122
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 38.3 bits (85), Expect = 0.004
Identities = 27/90 (30%), Positives = 38/90 (42%)
Frame = +1
Query: 256 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 435
GITI A Y V IID PGH DF + D A+L++ + G I+
Sbjct: 118 GITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITV 177
Query: 436 NGQTREHALLAFTLGVKQLIVGVNKWIPLN 525
+ Q R + + K +G + W LN
Sbjct: 178 DRQMRRYEVPRVAFINKLDRMGADPWKVLN 207
Score = 27.9 bits (59), Expect = 5.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGI 152
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 38.3 bits (85), Expect = 0.004
Identities = 27/90 (30%), Positives = 38/90 (42%)
Frame = +1
Query: 256 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 435
GITI A Y V IID PGH DF + D A+L++ + G I+
Sbjct: 118 GITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITV 177
Query: 436 NGQTREHALLAFTLGVKQLIVGVNKWIPLN 525
+ Q R + + K +G + W LN
Sbjct: 178 DRQMRRYEVPRVAFINKLDRMGADPWKVLN 207
Score = 27.9 bits (59), Expect = 5.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGI 152
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 37.9 bits (84), Expect = 0.005
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 244 LSVXGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 411
+S+ + + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 190 ISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 37.9 bits (84), Expect = 0.005
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 244 LSVXGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 411
+S+ + + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 190 ISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 35.5 bits (78), Expect = 0.025
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +1
Query: 292 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 471
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 472 TLGVKQLIVGVNK 510
+ +K +I+ NK
Sbjct: 178 MMRLKHIIILQNK 190
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 35.5 bits (78), Expect = 0.025
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +1
Query: 292 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 471
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 472 TLGVKQLIVGVNK 510
+ +K +I+ NK
Sbjct: 178 MMRLKHIIILQNK 190
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 35.1 bits (77), Expect = 0.033
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +1
Query: 286 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 453
FE SK +V+ +D PGH + M+ G + D A+L++AA QT E
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSE 165
Query: 454 HALLAFTLGVKQLIVGVNK 510
H + +K +I+ NK
Sbjct: 166 HLAAVEIMQLKHIIILQNK 184
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 34.7 bits (76), Expect = 0.044
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +1
Query: 304 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 483
+V+ +D PGH + M+ G + D A+LI+AA QT EH + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 484 KQLIVGVNK 510
K +I+ NK
Sbjct: 174 KDIIIIQNK 182
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 33.1 bits (72), Expect = 0.13
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 289 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 411
E S Y + +ID PGH DF + S A+L+V A G
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG 171
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 39 D*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK 158
D K EK N +I H+D GKST L+ G I K
Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK 95
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 33.1 bits (72), Expect = 0.13
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 259 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 411
IT+ + + Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 60 ITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
Score = 32.7 bits (71), Expect = 0.18
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGG 149
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.18
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 307 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 411
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 32.7 bits (71), Expect = 0.18
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 63 KTHINIVVIGHVDSGKSTTTGHLIYKCG 146
K + NI ++ H+D+GK+TTT ++Y G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1
Query: 256 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 411
GITI A K+ + IID PGH DF + D A+ + + G
Sbjct: 146 GITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAG 197
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 31.1 bits (67), Expect = 0.54
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +1
Query: 256 GITIDIAL----WKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 411
GITI + + +E + + + +ID PGH DF + + + A+L+V A G
Sbjct: 133 GITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 173
N +I H+D GKST L+ G + R +++
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKE 120
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 313 IIDAPGHRDFIKNMITGTSQADCAVLIV 396
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 313 IIDAPGHRDFIKNMITGTSQADCAVLIV 396
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 313 IIDAPGHRDFIKNMITGTSQADCAVLIV 396
+ID PGH F G+S D A+L+V
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 295 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 396
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCG 146
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 307 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 396
+ +ID PGH F G++ D A+L+V
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV 587
>At5g46380.1 68418.m05708 hypothetical protein
Length = 607
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Frame = -1
Query: 261 DTXHAQPLVCPIPKHI*RILYPFP-----GPPSRTSRW 163
D H +PLV P+P H R YP P GP +R+S +
Sbjct: 483 DAYHLRPLVAPLPLH--RDSYPCPPTLAAGPYTRSSAY 518
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 316 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 411
+D PGH F G D A+++VAA G
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDG 588
>At4g20430.1 68417.m02981 subtilase family protein contains Pfam
profile: PF00082 subtilase family
Length = 856
Score = 27.1 bits (57), Expect = 8.7
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = -1
Query: 489 LFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSIN 316
+FDT E L G+ F +TGT ++ IS GS D L I+VS+ N
Sbjct: 714 IFDTSFEDYMSFLCGINGSAPVVFNYTGTNCLRNNATIS--GS-DLNLPSITVSKLNN 768
>At4g10890.1 68417.m01772 expressed protein
Length = 527
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +3
Query: 174 FEXEAQEMGKGSFKYAWVLDKLKAEREXYHNRYCSLEVRN*QVLCY 311
F E +EM + A LK +R+ YH+ + L + +V+ Y
Sbjct: 234 FSEEEEEMAEKQRWIAMYTKHLKQKRKVYHDGFLDLHIARKKVMLY 279
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,085,218
Number of Sequences: 28952
Number of extensions: 241608
Number of successful extensions: 739
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1092379416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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