Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060399.seq
         (670 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.9  
AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.         23   8.7  
AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.         23   8.7  
AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.         23   8.7  
AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.         23   8.7  
AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.         23   8.7  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 666 HPPVGHSNQHLHH 628
           H PVG  + HLHH
Sbjct: 809 HSPVGAGSHHLHH 821


>AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 392 TTEPTIYSPPFGPPNLXFWSSHSPPILAK 306
           T +PT  +PP  PP L  ++   P    K
Sbjct: 133 TVKPTTTTPPPCPPTLTTFNGGQPTCAGK 161


>AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 392 TTEPTIYSPPFGPPNLXFWSSHSPPILAK 306
           T +PT  +PP  PP L  ++   P    K
Sbjct: 133 TVKPTTTTPPPCPPTLTTFNGGQPTCAGK 161


>AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 392 TTEPTIYSPPFGPPNLXFWSSHSPPILAK 306
           T +PT  +PP  PP L  ++   P    K
Sbjct: 133 TVKPTTTTPPPCPPTLTTFNGGQPTCAGK 161


>AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.
          Length = 187

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 392 TTEPTIYSPPFGPPNLXFWSSHSPPILAK 306
           T +PT  +PP  PP L  ++   P    K
Sbjct: 131 TVKPTTTTPPPCPPTLTTFNGGQPTCAGK 159


>AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 392 TTEPTIYSPPFGPPNLXFWSSHSPPILAK 306
           T +PT  +PP  PP L  ++   P    K
Sbjct: 133 TVKPTTTTPPPCPPTLTTFNGGQPTCAGK 161


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,486
Number of Sequences: 2352
Number of extensions: 10178
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)