BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060397.seq
(658 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X95912-1|CAA65156.1| 696|Anopheles gambiae immune factor protein. 23 6.4
EF989011-1|ABS17666.1| 399|Anopheles gambiae serpin 7 protein. 23 8.5
>X95912-1|CAA65156.1| 696|Anopheles gambiae immune factor protein.
Length = 696
Score = 23.4 bits (48), Expect = 6.4
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3
Query: 230 GWNRSLSSHVIANPSQNLPCQSN 162
GW + + SH PSQ P Q N
Sbjct: 522 GWVQPVPSHTQNGPSQPQPQQQN 544
>EF989011-1|ABS17666.1| 399|Anopheles gambiae serpin 7 protein.
Length = 399
Score = 23.0 bits (47), Expect = 8.5
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = -2
Query: 381 LVSPLRMLIAFKVLRILSSRGSSN*VQ*FFSSPNRFAISSEGGDRPLED 235
+VSPL + +AF L ++ G+ VQ F P+ + + ++ + D
Sbjct: 65 VVSPLAVRLAFSALYQVTDSGTREAVQRAFYLPSAVSDARANAEQLVSD 113
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,974
Number of Sequences: 2352
Number of extensions: 11974
Number of successful extensions: 46
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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