Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060396.seq
         (564 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q09F58 Cluster: Heme maturase; n=4; Alveolata|Rep: Heme...    34   2.0  
UniRef50_Q8IAP3 Cluster: Putative uncharacterized protein PF08_0...    33   3.5  

>UniRef50_Q09F58 Cluster: Heme maturase; n=4; Alveolata|Rep: Heme
           maturase - Tetrahymena paravorax
          Length = 514

 Score = 34.3 bits (75), Expect = 2.0
 Identities = 22/93 (23%), Positives = 41/93 (44%)
 Frame = -3

Query: 289 INSILIFFVYFYLINVFVNIFRI*DAIFIISVNQRVLFHIXXXXXXXXXXXXXXXXFSRH 110
           IN++++F +YFYL   F+N+  I   I+    N  ++ +I                   H
Sbjct: 328 INNLILFLIYFYLFIYFINLQNIYLFIYYFIFNDFIIINIFLYLYRYYIFKYKLL----H 383

Query: 109 LFLHFGHKLIIMIIYCAEKXSLRIK*FRISLIY 11
           +++ F   +II+  Y + K ++R       L Y
Sbjct: 384 IYI-FNFIIIIIFFYFSYKINIRFNYINFKLNY 415


>UniRef50_Q8IAP3 Cluster: Putative uncharacterized protein PF08_0122;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein PF08_0122 - Plasmodium falciparum
            (isolate 3D7)
          Length = 1997

 Score = 33.5 bits (73), Expect = 3.5
 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +2

Query: 119  KGKKRKANTNLVTSEPKNV-KQNSLVNADNKN 211
            KGKK+K NTN++  + KNV K    V  D KN
Sbjct: 1035 KGKKKKKNTNIMEKDTKNVEKDTKNVEKDTKN 1066


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 404,353,966
Number of Sequences: 1657284
Number of extensions: 5884705
Number of successful extensions: 14505
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14486
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37904934977
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)