Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060395.seq
         (647 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   2.9  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   3.8  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   6.6  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   8.7  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   8.7  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   8.7  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   8.7  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   8.7  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   8.7  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   8.7  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   8.7  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 592 QRCTSGPGLTQ*KLWC 639
           QRC +G    + KLWC
Sbjct: 452 QRCNAGLVFDEEKLWC 467


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +3

Query: 336 EANGLVPNRDLQIVGLTWGLFLGDLHNLRPVDLILASDCFYE 461
           E NG+   + L    + + L +GDLH       I+  D FY+
Sbjct: 149 EINGIFAFQVLMCTSMNFVLLIGDLHT---SIYIIFFDMFYQ 187


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 93  IFGDCYPGAIVSRLFVLHVAIC 158
           I  D Y G +V + F   VA+C
Sbjct: 244 IVSDTYQGILVVQFFCSLVALC 265


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 254 SIPGSPVPQPNSNTLRPRIC 195
           S PG+    PN+N+  P  C
Sbjct: 23  SSPGTDYYNPNANSTYPPAC 42


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 254 SIPGSPVPQPNSNTLRPRIC 195
           S PG+    PN+N+  P  C
Sbjct: 23  SSPGTDYYNPNANSTYPPAC 42


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 254 SIPGSPVPQPNSNTLRPRIC 195
           S PG+    PN+N+  P  C
Sbjct: 23  SSPGTDYYNPNANSTYPPAC 42


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 254 SIPGSPVPQPNSNTLRPRIC 195
           S PG+    PN+N+  P  C
Sbjct: 23  SSPGTDYYNPNANSTYPPAC 42


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 254 SIPGSPVPQPNSNTLRPRIC 195
           S PG+    PN+N+  P  C
Sbjct: 23  SSPGTDYYNPNANSTYPPAC 42


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 254 SIPGSPVPQPNSNTLRPRIC 195
           S PG+    PN+N+  P  C
Sbjct: 23  SSPGTDYYNPNANSTYPPAC 42


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 254 SIPGSPVPQPNSNTLRPRIC 195
           S PG+    PN+N+  P  C
Sbjct: 23  SSPGTDYYNPNANSTYPPAC 42


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 254 SIPGSPVPQPNSNTLRPRIC 195
           S PG+    PN+N+  P  C
Sbjct: 23  SSPGTDYYNPNANSTYPPAC 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,970
Number of Sequences: 336
Number of extensions: 3035
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)