Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060395.seq
(647 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4631| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_3762| Best HMM Match : MTS (HMM E-Value=0.11) 37 0.012
SB_14415| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_56400| Best HMM Match : MTS (HMM E-Value=0.44) 34 0.087
SB_37212| Best HMM Match : zf-C2H2 (HMM E-Value=2e-23) 32 0.35
SB_11330| Best HMM Match : DUF1126 (HMM E-Value=3.7) 31 0.61
SB_4910| Best HMM Match : HECT (HMM E-Value=5.8e-33) 30 1.9
SB_44749| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_23648| Best HMM Match : Atracotoxin (HMM E-Value=0.22) 30 1.9
SB_43120| Best HMM Match : TFIIB (HMM E-Value=8.9) 28 5.7
SB_31063| Best HMM Match : TFIIB (HMM E-Value=0.0023) 28 5.7
SB_19986| Best HMM Match : bZIP_2 (HMM E-Value=5.7e-17) 28 5.7
SB_14885| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_11601| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_56995| Best HMM Match : TFIIB (HMM E-Value=0.0059) 28 5.7
SB_51229| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_45432| Best HMM Match : TFIIB (HMM E-Value=7.8) 28 5.7
SB_38347| Best HMM Match : TFIIB (HMM E-Value=0.0018) 28 5.7
SB_33949| Best HMM Match : TFIIB (HMM E-Value=0.0018) 28 5.7
SB_31959| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_26236| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_58603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_37606| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_8278| Best HMM Match : MTS (HMM E-Value=4e-07) 28 7.5
SB_45681| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_33988| Best HMM Match : TFIIB (HMM E-Value=0.0037) 27 9.9
SB_16292| Best HMM Match : Lipase_GDSL (HMM E-Value=0.036) 27 9.9
>SB_4631| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/73 (45%), Positives = 46/73 (63%)
Frame = +3
Query: 246 GNTAAKCGALVTLTDSLTLPRSLRHLSACCEANGLVPNRDLQIVGLTWGLFLGDLHNLRP 425
G AAKCGALV+L+DS P L + +AN + + L ++G+TWG + +L NL
Sbjct: 9 GIVAAKCGALVSLSDSEDYPECLANCHKSIQANNV---QTLDVLGVTWGQYSPNLINLPS 65
Query: 426 VDLILASDCFYEP 464
D+IL SDCFY+P
Sbjct: 66 QDIILGSDCFYDP 78
>SB_3762| Best HMM Match : MTS (HMM E-Value=0.11)
Length = 286
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = +1
Query: 106 VIPELLSAGYSFYTWPSAPLLAWYLWTQRRHIRGLRVLELGCGTGLPGI 252
+IP + G W A L +L + ++ RVLELGCG GLPGI
Sbjct: 86 LIPSVYEGGLKI--WECAVDLVEFLQESQILLQNRRVLELGCGAGLPGI 132
>SB_14415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 96
Score = 35.9 bits (79), Expect = 0.028
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +1
Query: 79 DTRGEYLEIVIPELLSAGYSFYTWPSAPLLAWYLWTQRRHIR-GL---RVLELGCGTGLP 246
+ G Y +VI + +S W +A +LA YL T ++ GL R +ELG GTG+
Sbjct: 19 ELEGNYGNLVIKQAVSGDVGCVVWDAAIVLAKYLETDGFNVNYGLAKKRAVELGAGTGVV 78
Query: 247 GI 252
G+
Sbjct: 79 GL 80
>SB_56400| Best HMM Match : MTS (HMM E-Value=0.44)
Length = 230
Score = 34.3 bits (75), Expect = 0.087
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 130 GYSFYTWPSAPLLAWYLWTQRRHIRGLRVLELGCGTGLPGIL 255
G + W +A +L+ YL + + R++ELG GTGL G++
Sbjct: 50 GVAAVLWDAAIILSRYLEQNKELVHQKRIIELGAGTGLVGMV 91
>SB_37212| Best HMM Match : zf-C2H2 (HMM E-Value=2e-23)
Length = 827
Score = 32.3 bits (70), Expect = 0.35
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = -2
Query: 514 SASSRYATVDSTSSNCDGS*KQSDARIRSTGRKLCRSPKNKPHVRPTICKSRLGTKPLAS 335
S S Y++ S S +C+ + R+ ST +L RS PH+ + S + + L
Sbjct: 720 STYSSYSSQPSGSRDCESVSSGEEGRVNSTPPRLIRSQMKTPHLDRSGSYSVIDAEALNR 779
Query: 334 QQAER*RSDLGNVRL 290
++ ER R RL
Sbjct: 780 EELEREREKEKATRL 794
>SB_11330| Best HMM Match : DUF1126 (HMM E-Value=3.7)
Length = 175
Score = 31.5 bits (68), Expect = 0.61
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -1
Query: 281 GYERSALRGSIPGSPVPQPNSNTLRPRICRLCVHK 177
GY R L GS+PG+ PN N R CR C K
Sbjct: 122 GYARQHLLGSLPGNTRGVPNQNGARR--CRCCAEK 154
>SB_4910| Best HMM Match : HECT (HMM E-Value=5.8e-33)
Length = 958
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 22 PVSGQLKKFVFRARSSTNGDTRGEYLEIVIPELLSAGYSFYTWPSAPLLAWY 177
P G L+ F R++ N D G+Y + +P +S Y W L A Y
Sbjct: 249 PEFGSLEVLPFFVRTANNKDAVGDYQDSYLPSPSCTEWSVYEWLGKILGALY 300
>SB_44749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2250
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = +3
Query: 363 DLQIVGLTWGLFLGDLHNLRPVDLILASDCFYEPSQFEEVLSTVAYLLEALTRVFCVLTR 542
D+ + TWG L DL++A++ Y+ + ++A ++ + ++VF + R
Sbjct: 460 DINALEYTWGTDTSKLTRHGLYDLVVAAEVLYDEKDSVVLAKSIARVVHSKSKVFVSMGR 519
Query: 543 N 545
N
Sbjct: 520 N 520
>SB_23648| Best HMM Match : Atracotoxin (HMM E-Value=0.22)
Length = 224
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 275 ERSALRGSIPGSPVPQPNSNTLRPRICRL--CVHKYQASRGADG 150
+RS +IPG PVP+ N TL P + KY+ SR + G
Sbjct: 12 DRSPPPYNIPGGPVPEINVPTLMPEFALFDRALTKYETSRASLG 55
>SB_43120| Best HMM Match : TFIIB (HMM E-Value=8.9)
Length = 173
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 275 ERSALRGSIPGSPVPQPNSNTLRPRICRL--CVHKYQASRGADG 150
+RS +IPG PVP+ N TL P + +Y+ SR + G
Sbjct: 12 DRSPPPYNIPGGPVPEINVPTLMPEFALFDRALTEYETSRASLG 55
>SB_31063| Best HMM Match : TFIIB (HMM E-Value=0.0023)
Length = 268
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 275 ERSALRGSIPGSPVPQPNSNTLRPRICRL--CVHKYQASRGADG 150
+RS +IPG PVP+ N TL P + +Y+ SR + G
Sbjct: 18 DRSPPPYNIPGGPVPEINVPTLMPEFALFDRALTEYETSRASLG 61
>SB_19986| Best HMM Match : bZIP_2 (HMM E-Value=5.7e-17)
Length = 278
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -2
Query: 289 SVRVTSAPHFAAVFPAVLFRNLTPTLSDREYVAFASTSTKL 167
SV V P + PAV +RN +PT+ RE V + ++KL
Sbjct: 126 SVVVKVEPKVDSPKPAVSYRNKSPTMVPRETVPQSKQASKL 166
>SB_14885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 472
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 275 ERSALRGSIPGSPVPQPNSNTLRPRICRL--CVHKYQASRGADG 150
+RS +IPG PVP+ N TL P + +Y+ SR + G
Sbjct: 181 DRSPPPYNIPGGPVPEINVPTLMPEFALFDRALTEYETSRASLG 224
>SB_11601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 490
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 275 ERSALRGSIPGSPVPQPNSNTLRPRICRL--CVHKYQASRGADG 150
+RS +IPG PVP+ N TL P + +Y+ SR + G
Sbjct: 194 DRSPPPYNIPGGPVPEINVPTLMPEFALFDRALTEYETSRASLG 237
>SB_56995| Best HMM Match : TFIIB (HMM E-Value=0.0059)
Length = 657
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 275 ERSALRGSIPGSPVPQPNSNTLRPRICRL--CVHKYQASRGADG 150
+RS +IPG PVP+ N TL P + +Y+ SR + G
Sbjct: 98 DRSPPPYNIPGGPVPEINVPTLMPEFALFDRALTEYETSRASLG 141
>SB_51229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 507
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2
Query: 436 IRSTGRKLCRSPKNKPHVRPTICKSRLGTKPLAS 335
+RS R RS + KP R T +S+ T+PL+S
Sbjct: 136 LRSLSRASVRSTRGKPPSRSTSIRSQGNTEPLSS 169
>SB_45432| Best HMM Match : TFIIB (HMM E-Value=7.8)
Length = 173
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 275 ERSALRGSIPGSPVPQPNSNTLRPRICRL--CVHKYQASRGADG 150
+RS +IPG PVP+ N TL P + +Y+ SR + G
Sbjct: 12 DRSPPPYNIPGGPVPEINVPTLMPEFALFDRALTEYETSRASLG 55
>SB_38347| Best HMM Match : TFIIB (HMM E-Value=0.0018)
Length = 631
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 275 ERSALRGSIPGSPVPQPNSNTLRPRICRL--CVHKYQASRGADG 150
+RS +IPG PVP+ N TL P + +Y+ SR + G
Sbjct: 335 DRSPPPYNIPGGPVPEINVPTLMPEFALFDRALTEYETSRASLG 378
>SB_33949| Best HMM Match : TFIIB (HMM E-Value=0.0018)
Length = 720
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 275 ERSALRGSIPGSPVPQPNSNTLRPRICRL--CVHKYQASRGADG 150
+RS +IPG PVP+ N TL P + +Y+ SR + G
Sbjct: 242 DRSPPPYNIPGGPVPEINVPTLMPEFALFDRALTEYETSRASLG 285
>SB_31959| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 303
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 275 ERSALRGSIPGSPVPQPNSNTLRPRICRL--CVHKYQASRGADG 150
+RS +IPG PVP+ N TL P + +Y+ SR + G
Sbjct: 12 DRSPPPYNIPGGPVPEINVPTLMPEFALFDRALTEYETSRASLG 55
>SB_26236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = -2
Query: 529 QKTRVSASSRYATVDSTSSNCDGS*KQSDARIRSTGRKLCRSPKNKPHVRPTI 371
QK+ S+ + A V S S G+ K+S R+R R KN P T+
Sbjct: 285 QKSNASSDASLADVSSVESVRTGTRKKSSERLRKERRTQSNLSKNAPQGSHTL 337
>SB_58603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 34 QLKKFVFRARSSTNGDTRGEYLEIVIPELLSAGYS 138
+L+K R SS N + +GEY EI+ + +S+ ++
Sbjct: 326 KLRKKTLRESSSINEERKGEYFEIMSVDYMSSEHT 360
>SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3259
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/58 (25%), Positives = 22/58 (37%)
Frame = +1
Query: 1 GTRSDGRPVSGQLKKFVFRARSSTNGDTRGEYLEIVIPELLSAGYSFYTWPSAPLLAW 174
G DG+P G D + ++ E LSAG F W + ++AW
Sbjct: 2837 GKTKDGKPQDGDTASIDSSTSGQREMDRGVKKKSQLLSEALSAGTPFALWNAPTVVAW 2894
>SB_37606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 239
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 88 GEYLEIVIPELLSAGYSFYTW 150
GEYL I++ E S GY+ TW
Sbjct: 9 GEYLRILVTESQSIGYNRVTW 29
>SB_8278| Best HMM Match : MTS (HMM E-Value=4e-07)
Length = 254
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 91 EYLEIVIPELLSAGYSFYTWPSAPLLAWYLWTQRRHIRGLRVLELGCGTGLPGIL 255
+Y + EL G +F T +LA + ++ +LE+GCGTGL I+
Sbjct: 37 QYPTVFDTELTEQGAAFSTTELLRVLAEEM--DKKPGEAFALLEIGCGTGLTSIM 89
>SB_45681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 277
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -1
Query: 254 SIPGSPVPQPNSNTLRPRICRL--CVHKYQASRGADG 150
+IPG PVP+ N TL P + +Y+ SR + G
Sbjct: 123 NIPGGPVPEINVPTLMPEFALFDRALTEYETSRASLG 159
>SB_33988| Best HMM Match : TFIIB (HMM E-Value=0.0037)
Length = 412
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -1
Query: 275 ERSALRGSIPGSPVPQPNSNTLRPRICRL--CVHKYQASRGADG 150
+RS +IP PVP+ N TL P + KY+ SR + G
Sbjct: 116 DRSPPPYNIPNGPVPEINVPTLMPEFALFDRALAKYETSRASLG 159
>SB_16292| Best HMM Match : Lipase_GDSL (HMM E-Value=0.036)
Length = 738
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Frame = +1
Query: 193 RHIRGLRVL---ELGCGTGLPGILPR 261
R RG+ VL +L CGTG PG P+
Sbjct: 80 REFRGIPVLTRTDLQCGTGFPGSTPK 105
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,536,786
Number of Sequences: 59808
Number of extensions: 430987
Number of successful extensions: 1097
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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