Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060395.seq
         (647 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC045819-1|AAH45819.1|  300|Homo sapiens LOC124512 protein protein.    83   6e-16
BC033998-1|AAH33998.2|  270|Homo sapiens LOC124512 protein protein.    83   6e-16
BC103501-1|AAI03502.1|  226|Homo sapiens hypothetical protein LO...    37   0.071
BC099841-1|AAH99841.1|  226|Homo sapiens family with sequence si...    37   0.071
BC016395-1|AAH16395.1|  226|Homo sapiens family with sequence si...    37   0.071
AF455816-1|AAL66294.1|  226|Homo sapiens hepatocellular carcinom...    37   0.071
BC033720-1|AAH33720.1|  218|Homo sapiens family with sequence si...    35   0.29 
BC009462-1|AAH09462.1|   90|Homo sapiens FAM119A protein protein.      35   0.29 
AK093812-1|BAC04229.1|  218|Homo sapiens protein ( Homo sapiens ...    35   0.29 
AF455817-1|AAL66295.1|  218|Homo sapiens hepatocellular carcinom...    35   0.29 
AC079767-2|AAX93175.1|  218|Homo sapiens unknown protein.              35   0.29 
AF366498-1|AAK62912.1|   75|Homo sapiens T-cell receptor V delta...    31   4.7  
AF366497-1|AAK62911.1|   75|Homo sapiens T-cell receptor V delta...    31   4.7  
BC053733-1|AAH53733.1|  323|Homo sapiens chromosome 2 open readi...    30   8.2  
AK027104-1|BAB15658.1|  323|Homo sapiens protein ( Homo sapiens ...    30   8.2  
AC067957-1|AAX88866.1|  197|Homo sapiens unknown protein.              30   8.2  

>BC045819-1|AAH45819.1|  300|Homo sapiens LOC124512 protein protein.
          Length = 300

 Score = 83.4 bits (197), Expect = 6e-16
 Identities = 45/93 (48%), Positives = 58/93 (62%)
 Frame = +3

Query: 246 GNTAAKCGALVTLTDSLTLPRSLRHLSACCEANGLVPNRDLQIVGLTWGLFLGDLHNLRP 425
           G  AAKCGA V L+DS  LP  L      C+ N L P+  LQ+VGLTWG    DL  L P
Sbjct: 147 GILAAKCGAEVILSDSSELPHCLEVCRQSCQMNNL-PH--LQVVGLTWGHISWDLLALPP 203

Query: 426 VDLILASDCFYEPSQFEEVLSTVAYLLEALTRV 524
            D+ILASD F+EP  FE++L+T+ +L+    +V
Sbjct: 204 QDIILASDVFFEPEDFEDILATIYFLMHKNPKV 236



 Score = 64.9 bits (151), Expect = 2e-10
 Identities = 29/68 (42%), Positives = 37/68 (54%)
 Frame = +1

Query: 52  FRARSSTNGDTRGEYLEIVIPELLSAGYSFYTWPSAPLLAWYLWTQRRHIRGLRVLELGC 231
           FR          G  LE+ +P++L   Y  Y WP A +LA YLW  RR + G  +LE+G 
Sbjct: 82  FRFSEEPGPGADGAVLEVHVPQVLHLQYGMYVWPCAVVLAQYLWFHRRSLPGKAILEIGA 141

Query: 232 GTGLPGIL 255
           G  LPGIL
Sbjct: 142 GVSLPGIL 149


>BC033998-1|AAH33998.2|  270|Homo sapiens LOC124512 protein protein.
          Length = 270

 Score = 83.4 bits (197), Expect = 6e-16
 Identities = 45/93 (48%), Positives = 58/93 (62%)
 Frame = +3

Query: 246 GNTAAKCGALVTLTDSLTLPRSLRHLSACCEANGLVPNRDLQIVGLTWGLFLGDLHNLRP 425
           G  AAKCGA V L+DS  LP  L      C+ N L P+  LQ+VGLTWG    DL  L P
Sbjct: 117 GILAAKCGAEVILSDSSELPHCLEVCRQSCQMNNL-PH--LQVVGLTWGHISWDLLALPP 173

Query: 426 VDLILASDCFYEPSQFEEVLSTVAYLLEALTRV 524
            D+ILASD F+EP  FE++L+T+ +L+    +V
Sbjct: 174 QDIILASDVFFEPEDFEDILATIYFLMHKNPKV 206


>BC103501-1|AAI03502.1|  226|Homo sapiens hypothetical protein
           LOC25895, isoform a protein.
          Length = 226

 Score = 36.7 bits (81), Expect = 0.071
 Identities = 18/42 (42%), Positives = 24/42 (57%)
 Frame = +1

Query: 130 GYSFYTWPSAPLLAWYLWTQRRHIRGLRVLELGCGTGLPGIL 255
           G +   W +A  L  Y  +Q    RG +V+ELG GTG+ GIL
Sbjct: 51  GVAARVWDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGIL 92


>BC099841-1|AAH99841.1|  226|Homo sapiens family with sequence
           similarity 119, member B protein.
          Length = 226

 Score = 36.7 bits (81), Expect = 0.071
 Identities = 18/42 (42%), Positives = 24/42 (57%)
 Frame = +1

Query: 130 GYSFYTWPSAPLLAWYLWTQRRHIRGLRVLELGCGTGLPGIL 255
           G +   W +A  L  Y  +Q    RG +V+ELG GTG+ GIL
Sbjct: 51  GVAARVWDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGIL 92


>BC016395-1|AAH16395.1|  226|Homo sapiens family with sequence
           similarity 119, member B protein.
          Length = 226

 Score = 36.7 bits (81), Expect = 0.071
 Identities = 18/42 (42%), Positives = 24/42 (57%)
 Frame = +1

Query: 130 GYSFYTWPSAPLLAWYLWTQRRHIRGLRVLELGCGTGLPGIL 255
           G +   W +A  L  Y  +Q    RG +V+ELG GTG+ GIL
Sbjct: 51  GVAARVWDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGIL 92


>AF455816-1|AAL66294.1|  226|Homo sapiens hepatocellular
           carcinoma-associated antigen HCA557a protein.
          Length = 226

 Score = 36.7 bits (81), Expect = 0.071
 Identities = 18/42 (42%), Positives = 24/42 (57%)
 Frame = +1

Query: 130 GYSFYTWPSAPLLAWYLWTQRRHIRGLRVLELGCGTGLPGIL 255
           G +   W +A  L  Y  +Q    RG +V+ELG GTG+ GIL
Sbjct: 51  GVAARVWDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGIL 92


>BC033720-1|AAH33720.1|  218|Homo sapiens family with sequence
           similarity 119, member A protein.
          Length = 218

 Score = 34.7 bits (76), Expect = 0.29
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 130 GYSFYTWPSAPLLAWYLWTQRRHIRGLRVLELGCGTGLPGIL 255
           G +   W +A +L+ YL      +RG   +ELG GTGL GI+
Sbjct: 41  GVAAVVWDAAIVLSTYLEMGAVELRGRSAVELGAGTGLVGIV 82


>BC009462-1|AAH09462.1|   90|Homo sapiens FAM119A protein protein.
          Length = 90

 Score = 34.7 bits (76), Expect = 0.29
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 130 GYSFYTWPSAPLLAWYLWTQRRHIRGLRVLELGCGTGLPGIL 255
           G +   W +A +L+ YL      +RG   +ELG GTGL GI+
Sbjct: 41  GVAAVVWDAAIVLSTYLEMGAVELRGRSAVELGAGTGLVGIV 82


>AK093812-1|BAC04229.1|  218|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36493 fis, clone THYMU2018547. ).
          Length = 218

 Score = 34.7 bits (76), Expect = 0.29
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 130 GYSFYTWPSAPLLAWYLWTQRRHIRGLRVLELGCGTGLPGIL 255
           G +   W +A +L+ YL      +RG   +ELG GTGL GI+
Sbjct: 41  GVAAVVWDAAIVLSTYLEMGAVELRGRSAVELGAGTGLVGIV 82


>AF455817-1|AAL66295.1|  218|Homo sapiens hepatocellular
           carcinoma-associated antigen HCA557b protein.
          Length = 218

 Score = 34.7 bits (76), Expect = 0.29
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 130 GYSFYTWPSAPLLAWYLWTQRRHIRGLRVLELGCGTGLPGIL 255
           G +   W +A +L+ YL      +RG   +ELG GTGL GI+
Sbjct: 41  GVAAVVWDAAIVLSTYLEMGAVELRGRSAVELGAGTGLVGIV 82


>AC079767-2|AAX93175.1|  218|Homo sapiens unknown protein.
          Length = 218

 Score = 34.7 bits (76), Expect = 0.29
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 130 GYSFYTWPSAPLLAWYLWTQRRHIRGLRVLELGCGTGLPGIL 255
           G +   W +A +L+ YL      +RG   +ELG GTGL GI+
Sbjct: 41  GVAAVVWDAAIVLSTYLEMGAVELRGRSAVELGAGTGLVGIV 82


>AF366498-1|AAK62912.1|   75|Homo sapiens T-cell receptor V delta 1
           protein.
          Length = 75

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 14/53 (26%), Positives = 27/53 (50%)
 Frame = -2

Query: 508 SSRYATVDSTSSNCDGS*KQSDARIRSTGRKLCRSPKNKPHVRPTICKSRLGT 350
           S++Y       S C G  + +D  I   G ++   P+++PH +P++   + GT
Sbjct: 7   SAKYFCALGELSPCRGYARYTDKLIFGKGTRVTVEPRSQPHTKPSVFVMKNGT 59


>AF366497-1|AAK62911.1|   75|Homo sapiens T-cell receptor V delta 1
           protein.
          Length = 75

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 14/53 (26%), Positives = 27/53 (50%)
 Frame = -2

Query: 508 SSRYATVDSTSSNCDGS*KQSDARIRSTGRKLCRSPKNKPHVRPTICKSRLGT 350
           S++Y       S C G  + +D  I   G ++   P+++PH +P++   + GT
Sbjct: 7   SAKYFCALGELSPCRGYARYTDKLIFGKGTRVTVEPRSQPHTKPSVFVMKNGT 59


>BC053733-1|AAH53733.1|  323|Homo sapiens chromosome 2 open reading
           frame 34 protein.
          Length = 323

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 148 WPSAPLLAWYLWTQRRHIRGLRVLELGCG-TGLPGIL 255
           WPS  +LA+Y        R L V ELG G T L G++
Sbjct: 128 WPSEEVLAYYCLKHNNIFRALAVCELGGGMTCLAGLM 164


>AK027104-1|BAB15658.1|  323|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23451 fis, clone HSI06456. ).
          Length = 323

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 148 WPSAPLLAWYLWTQRRHIRGLRVLELGCG-TGLPGIL 255
           WPS  +LA+Y        R L V ELG G T L G++
Sbjct: 128 WPSEEVLAYYCLKHNNIFRALAVCELGGGMTCLAGLM 164


>AC067957-1|AAX88866.1|  197|Homo sapiens unknown protein.
          Length = 197

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 148 WPSAPLLAWYLWTQRRHIRGLRVLELGCG-TGLPGIL 255
           WPS  +LA+Y        R L V ELG G T L G++
Sbjct: 2   WPSEEVLAYYCLKHNNIFRALAVCELGGGMTCLAGLM 38


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,631,951
Number of Sequences: 237096
Number of extensions: 2095759
Number of successful extensions: 4534
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4532
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)