Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060395.seq
         (647 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23522-2|AAC46818.1|  521|Caenorhabditis elegans Hypothetical pr...    42   3e-04
CU457741-20|CAO82033.1|  206|Caenorhabditis elegans Hypothetical...    33   0.23 
U43283-3|AAC69024.2|  880|Caenorhabditis elegans Hypothetical pr...    31   0.53 
Z66514-2|CAA91342.1|  229|Caenorhabditis elegans Hypothetical pr...    31   0.70 
U49947-2|AAA93421.2| 1032|Caenorhabditis elegans Guanylyl cyclas...    29   2.8  
Z81062-3|CAB02948.2|  325|Caenorhabditis elegans Hypothetical pr...    29   3.8  
U97405-6|AAB53013.2|  142|Caenorhabditis elegans Hypothetical pr...    28   6.6  
CU457741-19|CAM36356.1|  167|Caenorhabditis elegans Hypothetical...    27   8.7  

>U23522-2|AAC46818.1|  521|Caenorhabditis elegans Hypothetical
           protein W06B4.2 protein.
          Length = 521

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
 Frame = +3

Query: 246 GNTAAKCGAL-VTLTDSLTLPRSLRHLSACCEANGLVPNRDLQIVGLTWGLFLG-----D 407
           G T AK GA  V +TD   L  +L  L    EANG+       + GL W          D
Sbjct: 47  GLTTAKLGAANVWMTDHPKLEAALETLQRNIEANGVAEK--CIVTGLDWESRASVSAVCD 104

Query: 408 LHNLRPVDLILASDCFYEPSQFEEVLSTVAYLL 506
               R +D+I+ASD F++PS F  ++ T A LL
Sbjct: 105 QIGDRHLDVIIASDVFFDPSTFCPLIDTFAQLL 137


>CU457741-20|CAO82033.1|  206|Caenorhabditis elegans Hypothetical
           protein C42C1.13b protein.
          Length = 206

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +1

Query: 148 WPSAPLLAWYLWTQRRHIRGLRVLELGCGTGLPGI 252
           W SA +   Y +   +   G +VLELG GTG+ GI
Sbjct: 35  WDSALMTIHYFFKYPKPFEGKKVLELGSGTGVGGI 69


>U43283-3|AAC69024.2|  880|Caenorhabditis elegans Hypothetical
           protein T25G12.6 protein.
          Length = 880

 Score = 31.5 bits (68), Expect = 0.53
 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
 Frame = +3

Query: 381 LTWGL-FLGDLHNLRPVDLILASDCFYEPSQFEEVLSTVAYLLEALTRVFCVLTRNAA-- 551
           +T+G+   GD+H LRPV+  +      E     E  +  AY+L AL +    +T N++  
Sbjct: 370 ITYGIRAAGDIHGLRPVNQSVILLSASEDLTDIESATQYAYILSALPKQLITITLNSSGK 429

Query: 552 QTGLL 566
           Q GLL
Sbjct: 430 QLGLL 434


>Z66514-2|CAA91342.1|  229|Caenorhabditis elegans Hypothetical
           protein K01A11.2 protein.
          Length = 229

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = +1

Query: 139 FYTWPSAPLLAWYLWTQRRHIRGLRVLELGCGTGLPGIL 255
           F  W     L  Y+   +    G  VLELGCG  LP IL
Sbjct: 54  FKIWECTVDLCDYIEENQTLFAGKSVLELGCGAALPSIL 92


>U49947-2|AAA93421.2| 1032|Caenorhabditis elegans Guanylyl cyclase
            protein 11 protein.
          Length = 1032

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 20/56 (35%), Positives = 29/56 (51%)
 Frame = +3

Query: 141  LHVAICASASLVLVDAKATYSRSESVGVRLRNRTAGNTAAKCGALVTLTDSLTLPR 308
            LH    ASASL L+D+  T++ S     +LR R   +T    G +VT    + +PR
Sbjct: 887  LHAGEVASASLELLDSIKTFTVSHCPDEKLRLRIGNHT----GPVVTGVVGIRMPR 938


>Z81062-3|CAB02948.2|  325|Caenorhabditis elegans Hypothetical
           protein F15A4.4 protein.
          Length = 325

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 10/68 (14%)
 Frame = +3

Query: 366 LQIVGLTWGLFLGDLHNLRPVDLILASDCFYEPSQF----------EEVLSTVAYLLEAL 515
           + +V + WG+F   L    P    L S  F+EPS F            +  +VA +L  L
Sbjct: 66  VSLVLIFWGIFFNRLFMFIPPLCPLVSPLFFEPSLFLKMYYWMYNHARMSKSVAQILMVL 125

Query: 516 TRVFCVLT 539
            R+ CV++
Sbjct: 126 NRMCCVIS 133


>U97405-6|AAB53013.2|  142|Caenorhabditis elegans Hypothetical
           protein T09B4.4 protein.
          Length = 142

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/46 (26%), Positives = 25/46 (54%)
 Frame = +3

Query: 231 RNRTAGNTAAKCGALVTLTDSLTLPRSLRHLSACCEANGLVPNRDL 368
           RN+T    + +  A+++       P  +++L +  E NG+VP++ L
Sbjct: 91  RNKTRAMPSRELAAILSHVGEQMSPEEIKYLLSKVEVNGMVPHQAL 136


>CU457741-19|CAM36356.1|  167|Caenorhabditis elegans Hypothetical
           protein C42C1.13a protein.
          Length = 167

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 175 YLWTQRRHIRGLRVLELGCGTGLPGI 252
           Y +   +   G +VLELG GTG+ GI
Sbjct: 5   YFFKYPKPFEGKKVLELGSGTGVGGI 30


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,732,042
Number of Sequences: 27780
Number of extensions: 308200
Number of successful extensions: 801
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)