Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060393.seq
         (657 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    28   0.30 
DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       26   0.91 
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    25   1.6  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    24   3.7  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    24   4.9  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   8.5  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    23   8.5  

>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 27.9 bits (59), Expect = 0.30
 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = +3

Query: 423 LSSGGSREHVASAL-RGQKREVRHGSGHQLAFEDTLWAGLSDSYCGLPMGMTAEKLGAQF 599
           L+ G +   + S L RG + E++H S +Q         G   S  G P G  A  +G   
Sbjct: 288 LTMGFAYSMIVSKLWRGLRHEIKHSSLYQQTSRQHGTGGQGSSVGGAPTGAAAGSVGTAS 347

Query: 600 G 602
           G
Sbjct: 348 G 348


>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 26.2 bits (55), Expect = 0.91
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = +3

Query: 369 FPIDREQRSGHFDRRSQDLSSGGSREHVASALRGQKREVRHGSGHQL 509
           FP +           S D+  G S  +  +A  GQ++E   G+G QL
Sbjct: 441 FPHEDHYSQPQLQPSSTDIRRGTSNSNNINAATGQQQEPARGAGPQL 487


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 555 GLPMGMTAEKLGAQFGITRDESLTIT 632
           GLP G+    L AQ  + RD+++ ++
Sbjct: 488 GLPQGVVMNPLDAQCNVQRDDAICVS 513


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +1

Query: 181 DDSHCRCAEGGRSVPGSGRQHGRG 252
           DD +     GGR   G GR  GRG
Sbjct: 61  DDGYGGGGRGGRGGRGGGRGRGRG 84


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 17/39 (43%), Positives = 19/39 (48%)
 Frame = +1

Query: 256 VISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGF 372
           VISS+Q        H A   GIP  K V  + RL G GF
Sbjct: 753 VISSTQHP-TEIQHHVAQTLGIPASKVVSRVKRL-GGGF 789


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 11/42 (26%), Positives = 14/42 (33%)
 Frame = +1

Query: 208 GGRSVPGSGRQHGRGPVISSSQTDGIYTPRHAALKAGIPQEK 333
           G   VPG+    G  P      +D +   RH       P  K
Sbjct: 177 GASGVPGAEPSRGSTPPTPGDDSDSMGASRHGKTPLATPPTK 218


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 244 GRGPVISSSQTDGIYTPRHAALKAGIPQEKP 336
           G GP++SSS   G  + ++A    G+P   P
Sbjct: 69  GAGPIVSSSSGSGNSSKKYA--YCGLPYATP 97


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,928
Number of Sequences: 2352
Number of extensions: 13529
Number of successful extensions: 34
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)