Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060393.seq
(657 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical p... 108 3e-24
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 57 1e-08
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 51 6e-07
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 50 2e-06
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z81575-1|CAB04628.1| 277|Caenorhabditis elegans Hypothetical pr... 29 3.8
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 29 3.8
Z73973-2|CAA98264.1| 277|Caenorhabditis elegans Hypothetical pr... 28 6.7
U40954-6|ABQ13043.1| 127|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z92815-2|CAB07293.2| 476|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z92815-1|CAB07292.2| 530|Caenorhabditis elegans Hypothetical pr... 27 8.9
U41012-3|AAA82295.1| 277|Caenorhabditis elegans Hypothetical pr... 27 8.9
>Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical
protein F53A2.7 protein.
Length = 394
Score = 108 bits (260), Expect = 3e-24
Identities = 51/84 (60%), Positives = 64/84 (76%)
Frame = +1
Query: 250 GPVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISV 429
G V++SS+ DGIY RH LK+G+PQ L +NRLCGSGFQ++VN+AQ I G + I +
Sbjct: 56 GNVVASSR-DGIYLSRHIGLKSGVPQNVGALTVNRLCGSGFQAVVNAAQAIKLGESNIVL 114
Query: 430 AGGVENMSQAPFAVRNVRFGTALG 501
AGG ENMS PFAVR++RFGTALG
Sbjct: 115 AGGTENMSMVPFAVRDIRFGTALG 138
Score = 58.4 bits (135), Expect = 4e-09
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = +2
Query: 95 KGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVG 253
K +FIVGAKRT FGTFGG + SAT+L +A+ ALK A V VD ++ G
Sbjct: 4 KCVFIVGAKRTAFGTFGGKLKGLSATDLGVVASQAALKHANVGADAVDHVIFG 56
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Frame = +3
Query: 477 REVRHGS--GHQLAFEDTLWAGLSDSYCGLPMGMTAEKLGAQFGITRDES 620
R++R G+ G + FED LW LSD Y L MG TAEKLGAQ+ +TR E+
Sbjct: 129 RDIRFGTALGKKYEFEDMLWDSLSDPYAKLAMGQTAEKLGAQYKVTRQEA 178
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 57.2 bits (132), Expect = 1e-08
Identities = 33/90 (36%), Positives = 50/90 (55%)
Frame = +1
Query: 205 EGGRSVPGSGRQHGRGPVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIV 384
E G P S ++ G V ++ G R AAL AG+ V +N++C SG ++I+
Sbjct: 59 ERGAVKPSSIQEVFLGQVCQANA--GQAPARQAALGAGLDLSVAVTTVNKVCSSGLKAII 116
Query: 385 NSAQDILTGAAKISVAGGVENMSQAPFAVR 474
+AQ I TG ++ GG+E+MSQ PF V+
Sbjct: 117 LAAQQIQTGHQDFAIGGGMESMSQVPFYVQ 146
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +2
Query: 89 SVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVGQ 256
S K FIVGA RTP G+F + +A EL ++A AL+ V P+ + + +GQ
Sbjct: 20 SNKHAFIVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEVFLGQ 75
Score = 33.5 bits (73), Expect = 0.13
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 417 QDLSSGGSREHVASA-LRGQKREVRHGSGHQLAFEDTLWAGLSDSYCGLPMGMTAEKLGA 593
QD + GG E ++ Q+ E+ +G G Q+ + + GL+D+Y + MG EK
Sbjct: 127 QDFAIGGGMESMSQVPFYVQRGEIPYG-GFQV-IDGIVKDGLTDAYDKVHMGNCGEKTSK 184
Query: 594 QFGITRDE 617
+ GITR +
Sbjct: 185 EMGITRKD 192
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 51.2 bits (117), Expect = 6e-07
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +1
Query: 280 GIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISVAGGVENMSQA 459
G + R AAL AG+ V +N+ SG ++I+ +AQ I TG +++ GG+E+MSQ
Sbjct: 162 GQASARQAALGAGLDLSVAVTTVNKGWSSGMKAIILAAQQIQTGHQDLAIGGGMESMSQV 221
Query: 460 PFAVRNV 480
PF + V
Sbjct: 222 PFFLARV 228
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2
Query: 89 SVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVGQSSLH 268
S K FIVGA RTP G+F + +A EL ++A AL+ V P+ + V +
Sbjct: 98 SNKDAFIVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEANVFLGQVC 157
Query: 269 H 271
H
Sbjct: 158 H 158
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = +2
Query: 89 SVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVG 253
S K +FI+ RTP G + G F N A EL T+A A++ +GV+P +++ ++ G
Sbjct: 2 SDKKVFILSGARTPIGAYRGSFANFGAVELGTVAAKAAIERSGVAPEKIEEVIGG 56
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +1
Query: 295 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISVAGGVENMSQAPFAV- 471
R +L AG+P + +N++C S +++V +A +I G + G ENMSQ PF V
Sbjct: 69 RQISLSAGLPVTTQAVTVNKVCSSSMKALVTAAVEIKAGYYDTILVVGTENMSQVPFYVP 128
Query: 472 -RNVRFGTALGTNSPSK 519
+ FG T+ SK
Sbjct: 129 RGEIPFGGIQMTDGISK 145
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 534 GLSDSYCGLPMGMTAEKLGAQFGITRDE 617
GL D PMG+ AEK +GITR+E
Sbjct: 147 GLEDIKEKGPMGLCAEKTVKDYGITREE 174
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/94 (35%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +1
Query: 250 GPVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISV 429
G VI +T I R AAL AG+P + P + C S ++ + TG A +
Sbjct: 76 GTVIQECKTSNI--AREAALLAGVPDKIPAHTVTLACISSNVAMTTGMGMLATGNANAII 133
Query: 430 AGGVENMSQAPFAV-RNVRFGTALGTNSPSKTPS 528
AGGVE +S P RN R LG N PS
Sbjct: 134 AGGVELLSDVPIRYNRNAR-KAMLGMNKAKDVPS 166
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +2
Query: 77 IMSASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVG 253
+ ++ I +V A RTPF G VF++ A +LQ A +++ + Q+D ++ G
Sbjct: 18 VAKKNMPNIVLVDAVRTPFVVSGTVFKDLMAVDLQKEAIKALVEKTKLPYEQLDHIICG 76
>Z81575-1|CAB04628.1| 277|Caenorhabditis elegans Hypothetical
protein R08H2.1 protein.
Length = 277
Score = 28.7 bits (61), Expect = 3.8
Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 7/90 (7%)
Frame = +1
Query: 211 GRSVPGSGRQHGRGPVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLC-GSGFQSIVN 387
GRS + G I+ D + R LKAG+P EK + +C SG ++
Sbjct: 19 GRSAAVIFAKEGAQVTITGRSADRLEETRLQILKAGVPAEKINAVVADVCEASGQDEVIR 78
Query: 388 SAQ------DILTGAAKISVAGGVENMSQA 459
+ DIL A + G N QA
Sbjct: 79 TTLAKFGKIDILVNNAGALLTDGTSNTDQA 108
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -2
Query: 371 KPEPHSLLMPSTGFS*GIPALSAA*RGV*IPSVCDEEMTG-PRPCCRPEPGTLRP 210
+P S+L PSTG G P+ + G PSV + G P P P+PGT P
Sbjct: 1428 EPSNPSILGPSTG---GDPSPGPSPNGPSNPSVPESSTGGGPSPGPAPDPGTSDP 1479
>Z73973-2|CAA98264.1| 277|Caenorhabditis elegans Hypothetical
protein F25D1.5 protein.
Length = 277
Score = 27.9 bits (59), Expect = 6.7
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Frame = +1
Query: 211 GRSVPGSGRQHGRGPVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLC-GSGFQSIVN 387
GRS + G I+ D + + LKAG+P EK + + SG I+N
Sbjct: 19 GRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIIN 78
Query: 388 SAQ------DILTGAAKISVAGGVENMSQ 456
+ DIL A ++A G N Q
Sbjct: 79 TTLAKFGKIDILVNNAGANLADGTANTDQ 107
>U40954-6|ABQ13043.1| 127|Caenorhabditis elegans Hypothetical
protein ZK813.7 protein.
Length = 127
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 124 DAVWYLRRSLPQHIRDRTADDSHCRCAEGGRSVPGSGRQHGRGPVISSSQT 276
D Y++ + H +R+A +SH R E P + GP+ SS++
Sbjct: 29 DTWGYVQSRMLHHREERSASNSHSRSHESSELKPAGFGRPQPGPIRRSSES 79
>Z92815-2|CAB07293.2| 476|Caenorhabditis elegans Hypothetical
protein W01F3.1b protein.
Length = 476
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = -3
Query: 199 TDSGYRLQFGRGCVAEDSAEGTKRRPFSAHDENPFN*SRHDSKLYLSS*RRTEIYFMIAE 20
TD G+R++ + + KRR S + PF +RH + +S + + F++ E
Sbjct: 390 TDMGWRVKLDAWTAECGNQKLRKRRTVSIELDTPFQKNRHLRNVVVSKKGDSAVDFLLEE 449
Query: 19 LR 14
L+
Sbjct: 450 LQ 451
>Z92815-1|CAB07292.2| 530|Caenorhabditis elegans Hypothetical
protein W01F3.1a protein.
Length = 530
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = -3
Query: 199 TDSGYRLQFGRGCVAEDSAEGTKRRPFSAHDENPFN*SRHDSKLYLSS*RRTEIYFMIAE 20
TD G+R++ + + KRR S + PF +RH + +S + + F++ E
Sbjct: 444 TDMGWRVKLDAWTAECGNQKLRKRRTVSIELDTPFQKNRHLRNVVVSKKGDSAVDFLLEE 503
Query: 19 LR 14
L+
Sbjct: 504 LQ 505
>U41012-3|AAA82295.1| 277|Caenorhabditis elegans Hypothetical
protein C06A6.3 protein.
Length = 277
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = -1
Query: 219 TPASFSAPTVAIVCSSVADVLRKTPPKVPNGVLLAPTMKIPLTEADMIQNYTYPVNVELK 40
T FSA A V A + K P G L + TEAD+ ++ + +N +++
Sbjct: 2 TELEFSADNAAPVIPITAICIVADKNKAPRGFLPIIKCQDDQTEADLWRDGFFTINRQVR 61
Query: 39 YI 34
YI
Sbjct: 62 YI 63
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,462,080
Number of Sequences: 27780
Number of extensions: 304736
Number of successful extensions: 984
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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