Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060393.seq
(657 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g48230.2 68418.m05959 acetyl-CoA C-acyltransferase, putative ... 56 2e-08
At5g48230.1 68418.m05958 acetyl-CoA C-acyltransferase, putative ... 56 2e-08
At5g47720.3 68418.m05894 acetyl-CoA C-acyltransferase, putative ... 56 2e-08
At5g47720.2 68418.m05896 acetyl-CoA C-acyltransferase, putative ... 56 2e-08
At5g47720.1 68418.m05893 acetyl-CoA C-acyltransferase, putative ... 56 2e-08
At5g47720.4 68418.m05895 acetyl-CoA C-acyltransferase, putative ... 52 4e-07
At5g48880.2 68418.m06047 acetyl-CoA C-acyltransferase 1 / 3-keto... 46 2e-05
At5g48880.1 68418.m06046 acetyl-CoA C-acyltransferase 1 / 3-keto... 46 2e-05
At1g04710.1 68414.m00468 acetyl-CoA C-acyltransferase, putative ... 46 2e-05
At2g33150.1 68415.m04062 acetyl-CoA C-acyltransferase, putative ... 45 5e-05
At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger) fa... 31 0.67
At1g63850.1 68414.m07227 PRLI-interacting factor-related similar... 30 1.2
At1g53050.1 68414.m06007 protein kinase family protein contains ... 30 1.2
At1g76460.1 68414.m08893 RNA recognition motif (RRM)-containing ... 28 6.3
At1g16270.1 68414.m01948 protein kinase family protein contains ... 28 6.3
>At5g48230.2 68418.m05959 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 403
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/72 (38%), Positives = 42/72 (58%)
Frame = +1
Query: 295 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISVAGGVENMSQAPFAVR 474
R AAL AGIP +N++C SG ++++ +AQ I G + VAGG+E+MS P +
Sbjct: 76 RQAALGAGIPNSVICTTVNKVCASGMKAVMIAAQSIQLGINDVVVAGGMESMSNTPKYLA 135
Query: 475 NVRFGTALGTNS 510
R G+ G +S
Sbjct: 136 EARKGSRFGHDS 147
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/57 (42%), Positives = 32/57 (56%)
Frame = +2
Query: 83 SASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVG 253
S + + + IVG RTP G F G + AT+L ++A ALK A V PA V +V G
Sbjct: 7 SVNPRDVCIVGVARTPMGGFLGSLSSLPATKLGSLAIAAALKRANVDPALVQEVVFG 63
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 480 EVRHGS--GHQLAFEDTLWAGLSDSYCGLPMGMTAEKLGAQFGITRDE 617
E R GS GH + L GL D Y MG AE +F ITR++
Sbjct: 136 EARKGSRFGHDSLVDGMLKDGLWDVYNDCGMGSCAELCAEKFQITREQ 183
>At5g48230.1 68418.m05958 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 398
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/72 (38%), Positives = 42/72 (58%)
Frame = +1
Query: 295 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISVAGGVENMSQAPFAVR 474
R AAL AGIP +N++C SG ++++ +AQ I G + VAGG+E+MS P +
Sbjct: 71 RQAALGAGIPNSVICTTVNKVCASGMKAVMIAAQSIQLGINDVVVAGGMESMSNTPKYLA 130
Query: 475 NVRFGTALGTNS 510
R G+ G +S
Sbjct: 131 EARKGSRFGHDS 142
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/58 (41%), Positives = 31/58 (53%)
Frame = +2
Query: 80 MSASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVG 253
M+ + IVG RTP G F G + AT+L ++A ALK A V PA V +V G
Sbjct: 1 MNVDESDVCIVGVARTPMGGFLGSLSSLPATKLGSLAIAAALKRANVDPALVQEVVFG 58
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 480 EVRHGS--GHQLAFEDTLWAGLSDSYCGLPMGMTAEKLGAQFGITRDE 617
E R GS GH + L GL D Y MG AE +F ITR++
Sbjct: 131 EARKGSRFGHDSLVDGMLKDGLWDVYNDCGMGSCAELCAEKFQITREQ 178
>At5g47720.3 68418.m05894 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 405
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/69 (42%), Positives = 42/69 (60%)
Frame = +1
Query: 295 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISVAGGVENMSQAPFAVR 474
R AAL AGIP IN++C +G +S++ ++Q I G I VAGG+E+MS P +
Sbjct: 78 RQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVPKYLP 137
Query: 475 NVRFGTALG 501
+ R G+ LG
Sbjct: 138 DARRGSRLG 146
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/57 (40%), Positives = 31/57 (54%)
Frame = +2
Query: 83 SASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVG 253
S + + +VG RTP G F G + +AT L +IA ALK A V PA V+ + G
Sbjct: 9 SLQPRDVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFG 65
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 480 EVRHGS--GHQLAFEDTLWAGLSDSYCGLPMGMTAEKLGAQFGITRDE 617
+ R GS GH + + GL D Y MG+ E Q+ ITR+E
Sbjct: 138 DARRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYRITREE 185
>At5g47720.2 68418.m05896 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 415
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/69 (42%), Positives = 42/69 (60%)
Frame = +1
Query: 295 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISVAGGVENMSQAPFAVR 474
R AAL AGIP IN++C +G +S++ ++Q I G I VAGG+E+MS P +
Sbjct: 78 RQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVPKYLP 137
Query: 475 NVRFGTALG 501
+ R G+ LG
Sbjct: 138 DARRGSRLG 146
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/57 (40%), Positives = 31/57 (54%)
Frame = +2
Query: 83 SASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVG 253
S + + +VG RTP G F G + +AT L +IA ALK A V PA V+ + G
Sbjct: 9 SLQPRDVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFG 65
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 480 EVRHGS--GHQLAFEDTLWAGLSDSYCGLPMGMTAEKLGAQFGITRDE 617
+ R GS GH + + GL D Y MG+ E Q+ ITR+E
Sbjct: 138 DARRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYRITREE 185
>At5g47720.1 68418.m05893 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 405
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/69 (42%), Positives = 42/69 (60%)
Frame = +1
Query: 295 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISVAGGVENMSQAPFAVR 474
R AAL AGIP IN++C +G +S++ ++Q I G I VAGG+E+MS P +
Sbjct: 78 RQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVPKYLP 137
Query: 475 NVRFGTALG 501
+ R G+ LG
Sbjct: 138 DARRGSRLG 146
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/57 (40%), Positives = 31/57 (54%)
Frame = +2
Query: 83 SASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVG 253
S + + +VG RTP G F G + +AT L +IA ALK A V PA V+ + G
Sbjct: 9 SLQPRDVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFG 65
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 480 EVRHGS--GHQLAFEDTLWAGLSDSYCGLPMGMTAEKLGAQFGITRDE 617
+ R GS GH + + GL D Y MG+ E Q+ ITR+E
Sbjct: 138 DARRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYRITREE 185
>At5g47720.4 68418.m05895 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 406
Score = 51.6 bits (118), Expect = 4e-07
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +1
Query: 295 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISVAGGVENMSQAPFAVR 474
R AAL AGIP IN++C +G +S++ ++Q I G I VAGG+E+MS P +
Sbjct: 78 RQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVPKYLP 137
Query: 475 NV-RFGTALG 501
+ R G+ LG
Sbjct: 138 DASRRGSRLG 147
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/57 (40%), Positives = 31/57 (54%)
Frame = +2
Query: 83 SASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVG 253
S + + +VG RTP G F G + +AT L +IA ALK A V PA V+ + G
Sbjct: 9 SLQPRDVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFG 65
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +3
Query: 420 DLSSGGSREHVASALRGQKREVRHGS--GHQLAFEDTLWAGLSDSYCGLPMGMTAEKLGA 593
D+ G E +++ + R GS GH + + GL D Y MG+ E
Sbjct: 119 DIVVAGGMESMSNVPKYLPDASRRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICAD 178
Query: 594 QFGITRDE 617
Q+ ITR+E
Sbjct: 179 QYRITREE 186
>At5g48880.2 68418.m06047 acetyl-CoA C-acyltransferase 1 /
3-ketoacyl-CoA thiolase 1 (PKT1) identical to
3-keto-acyl-CoA-thiolase 1 [Arabidopsis thaliana]
GI:3169568
Length = 457
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/53 (43%), Positives = 29/53 (54%)
Frame = +1
Query: 295 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISVAGGVENMS 453
R AA AG P PV +NR C SG Q++ + A I G I + GVE+MS
Sbjct: 116 RVAAYFAGFPDSVPVRTVNRQCSSGLQAVADVAASIRAGYYDIGIGAGVESMS 168
Score = 33.1 bits (72), Expect = 0.17
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 552 CGLPMGMTAEKLGAQFGITRDE 617
C LPMG+T+E + +FG+TR+E
Sbjct: 193 CLLPMGITSENVAERFGVTREE 214
>At5g48880.1 68418.m06046 acetyl-CoA C-acyltransferase 1 /
3-ketoacyl-CoA thiolase 1 (PKT1) identical to
3-keto-acyl-CoA-thiolase 1 [Arabidopsis thaliana]
GI:3169568
Length = 414
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/53 (43%), Positives = 29/53 (54%)
Frame = +1
Query: 295 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISVAGGVENMS 453
R AA AG P PV +NR C SG Q++ + A I G I + GVE+MS
Sbjct: 73 RVAAYFAGFPDSVPVRTVNRQCSSGLQAVADVAASIRAGYYDIGIGAGVESMS 125
Score = 33.1 bits (72), Expect = 0.17
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 552 CGLPMGMTAEKLGAQFGITRDE 617
C LPMG+T+E + +FG+TR+E
Sbjct: 150 CLLPMGITSENVAERFGVTREE 171
>At1g04710.1 68414.m00468 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative similar to
3-ketoacyl-CoA thiolase (E.C. 2.3.1.16) from
[Arabidopsis thaliana] GI:2981616, [Cucumis sativus]
GI:393707, [Cucurbita cv. Kurokawa Amakuri] GI:1694621;
contains InterPro accession IPR002155: Thiolase
Length = 443
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/56 (37%), Positives = 31/56 (55%)
Frame = +1
Query: 295 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISVAGGVENMSQAP 462
R AA AG P+ P+ +NR C SG Q++ + A I G I + G+E+M+ P
Sbjct: 109 RMAAFYAGFPETVPIRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNP 164
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +3
Query: 552 CGLPMGMTAEKLGAQFGITRDE 617
C LPMG+T+E + +F ++R+E
Sbjct: 184 CLLPMGITSENVAHRFNVSREE 205
>At2g33150.1 68415.m04062 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative similar to
3-ketoacyl-CoA thiolase (E.C. 2.3.1.16) from
[Arabidopsis thaliana] GI:2981616, [Cucumis sativus]
GI:393707, [Cucurbita cv. Kurokawa Amakuri] GI:1694621;
contains InterPro accession IPR002155: Thiolase
Length = 462
Score = 44.8 bits (101), Expect = 5e-05
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +1
Query: 295 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISVAGGVENMSQAPFA 468
R AA AG P+ V +NR C SG Q++ + A I G I + G+E+M+ P A
Sbjct: 117 RMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMA 174
Score = 30.7 bits (66), Expect = 0.89
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 552 CGLPMGMTAEKLGAQFGITRDE 617
C LPMG+T+E + +FG++R E
Sbjct: 192 CLLPMGVTSENVAQRFGVSRQE 213
>At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 396
Score = 31.1 bits (67), Expect = 0.67
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +3
Query: 408 RRSQDLSSGGSREHVASALRGQKREVRHGSGHQLAF 515
R ++ S+G E+V +A RG++ EVR G+G + +F
Sbjct: 324 RNVRETSNGNVVENVGNADRGREDEVRSGNGRRFSF 359
>At1g63850.1 68414.m07227 PRLI-interacting factor-related similar to
PRLI-interacting factor G (GI:11139264) [Arabidopsis
thaliana]; contains Prosite PS00037: Myb DNA-binding
domain repeat signature 1
Length = 548
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -1
Query: 204 SAPTVAIVCSSVADVLRKTPPKVPNGVLLAPTMKIPLTEADMIQNYTYPVN 52
S+PT+ + +S AD + K P ++ NGVL +P+ + A T VN
Sbjct: 55 SSPTLFEMMASEADTIGKVPVQIHNGVLPSPSSSSSSSSAAATAARTTNVN 105
>At1g53050.1 68414.m06007 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 694
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +1
Query: 214 RSVPGSGRQHGRGPVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGS 366
RS GR++ + SS D P AA + G PQ++ G+ RL GS
Sbjct: 549 RSASAKGRRNYQDSQKVSSIADYSAMPGFAATRTGAPQQETCRGMTRLPGS 599
>At1g76460.1 68414.m08893 RNA recognition motif (RRM)-containing
protein low similarity to RRM-containing protein SEB-4
[Xenopus laevis] GI:8895698; contains Pfam profile:
PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP
domain)
Length = 285
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +1
Query: 172 RTADDSHCRCAEGGRSVPGSGRQHGRGPVISSSQTDGIYTPRHAALKAGIPQEKPV 339
+T + H A G SVPGS GP +S+ T + A +GIP PV
Sbjct: 207 QTIPNGHGYTAVQGYSVPGSHILQLGGPTVSTMTTSSM-PALQAPYPSGIPGPAPV 261
>At1g16270.1 68414.m01948 protein kinase family protein contains
PF|00069 Eukaryotic protein kinase domain. ESTs
gb|H37741, gb|T43005 and gb|AI100340 come from this gene
Length = 1147
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 185 IATVGALKEA-GVSPAQVDSMVVGQSSLHHKLTESTRHVTRRSKLV 319
+A G +K+ G + A V +V SL H L RH+ RR +L+
Sbjct: 927 VAFYGVVKDGPGATLATVTEYMV-DGSLRHVLVRKDRHLDRRKRLI 971
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,719,939
Number of Sequences: 28952
Number of extensions: 289110
Number of successful extensions: 919
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1373722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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