Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060392.seq
         (560 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    26   0.19 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    26   0.19 
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    22   3.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   3.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   4.1  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    21   7.2  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -2

Query: 58  LKHALRYYRHLFASLLSSC 2
           L+  LRY+  +F+SLLS C
Sbjct: 84  LQQKLRYFEEVFSSLLSCC 102


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -2

Query: 58  LKHALRYYRHLFASLLSSC 2
           L+  LRY+  +F+SLLS C
Sbjct: 84  LQQKLRYFEEVFSSLLSCC 102


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 468 TG*RTYRCQYC 500
           TG R YRC++C
Sbjct: 33  TGERPYRCEHC 43


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 468 TG*RTYRCQYC 500
           TG R YRC++C
Sbjct: 186 TGERPYRCEHC 196


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -2

Query: 532 ELWSEKKPIQ 503
           +LWSEK PIQ
Sbjct: 54  DLWSEKFPIQ 63


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 263 RISYQTSES*RNSRTGSRRELRCA 334
           RIS +  ES  N R    R+L+CA
Sbjct: 29  RISDEAIESTLNDRRYLLRQLKCA 52


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,090
Number of Sequences: 336
Number of extensions: 2349
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)