Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060392.seq
(560 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0618 - 4941906-4942118,4942231-4942343,4942534-4942651,494... 76 2e-14
02_01_0001 - 3864-4049,4861-4917,5514-5648,5710-5808,5884-5952,6... 73 2e-13
01_03_0161 + 13337265-13337297,13337880-13338017,13338211-133383... 64 6e-11
04_03_0988 - 21469811-21469831,21470823-21471047,21471327-214716... 64 1e-10
04_03_1011 - 21708503-21708544,21708689-21708898,21709000-217091... 63 2e-10
02_04_0214 - 20976977-20977171,20977499-20977611,20978041-209781... 63 2e-10
05_01_0410 - 3234455-3234466,3234851-3234950,3235037-3235161,323... 61 5e-10
02_04_0182 + 20719782-20720033,20720502-20720605,20720693-207210... 59 3e-09
06_01_0452 + 3198475-3198962,3199062-3199191,3199332-3199497,319... 58 4e-09
09_04_0345 + 16876489-16876614,16876718-16876876,16877989-168781... 50 1e-06
07_03_0651 + 20287661-20287701,20288034-20288124,20288737-202888... 44 1e-04
07_01_0621 - 4606739-4606894,4606976-4607098,4608199-4608288 40 0.002
04_04_0598 - 26514226-26514545,26516080-26516302 39 0.003
10_08_0532 + 18580579-18580746,18581923-18581997,18582659-185838... 37 0.013
07_01_0656 - 4912985-4913143,4913700-4913822,4914081-4914215 36 0.022
03_06_0089 - 31565454-31565517,31565594-31565618,31565743-315659... 36 0.029
02_05_0085 - 25697860-25698142,25698631-25698946,25700481-257005... 36 0.029
04_04_1575 + 34548774-34549109,34549979-34550185 34 0.089
08_02_0497 - 17811413-17811529,17811644-17811724,17812693-178128... 33 0.12
05_02_0053 - 6152204-6152329,6152817-6152981,6154698-6154883,615... 33 0.16
07_03_0550 - 19356710-19357763,19358941-19359256,19359552-19359609 32 0.27
01_06_1771 + 39787895-39788223,39788419-39788518,39788640-39788774 32 0.27
09_04_0744 - 19867604-19867686,19868075-19869872,19870777-198708... 31 0.48
05_06_0017 + 24964168-24964275,24965384-24965506,24965617-24965751 31 0.48
07_01_0159 - 1116786-1117153,1117251-1119936 31 0.63
03_06_0376 + 33479776-33479958,33481055-33481236,33481345-334814... 31 0.83
06_01_0825 + 6233525-6233740,6234274-6234461,6234544-6234668,623... 30 1.1
01_01_0474 - 3488739-3488876,3488996-3489118,3489878-3489991,349... 30 1.1
10_08_0426 - 17817975-17818582,17819068-17819209,17819648-178197... 30 1.5
01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956,647... 29 1.9
07_01_0353 + 2563807-2564496,2564595-2564660,2564853-2564918,256... 29 2.5
09_04_0038 - 13996505-13996836,13997047-13997077,13997307-139974... 29 3.4
05_01_0489 - 4077365-4077502,4078105-4078227,4079019-4079135,407... 29 3.4
04_03_0975 - 21370715-21370877,21371227-21371319,21371383-213714... 29 3.4
03_02_0863 - 11889492-11889761,11890257-11890421,11890518-11890637 29 3.4
03_02_0621 - 9923163-9923245,9924163-9924338,9924437-9924495,992... 29 3.4
03_01_0480 - 3676529-3676687,3676767-3676931,3677044-3677220,367... 29 3.4
02_05_0792 - 31777775-31778220,31778506-31778630,31778724-317789... 29 3.4
07_03_1717 - 28958309-28958581,28958678-28958842,28958944-289591... 28 4.4
03_06_0330 - 33178114-33178206,33178317-33178382,33179704-331798... 28 4.4
02_04_0285 - 21585048-21585173,21585302-21585355,21585512-21585952 28 4.4
09_02_0042 - 3402424-3402534,3403242-3403345,3403448-3403562,340... 28 5.9
05_07_0349 - 29448121-29448513 28 5.9
01_01_0255 + 2079112-2079196,2079334-2079514,2079712-2079853,207... 28 5.9
>11_01_0618 -
4941906-4942118,4942231-4942343,4942534-4942651,
4942762-4942881,4942964-4943101,4943392-4943517,
4943659-4943847,4943951-4944238,4944344-4944374,
4945014-4945216
Length = 512
Score = 75.8 bits (178), Expect = 2e-14
Identities = 42/109 (38%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Frame = +3
Query: 237 QGSHKAAEEESPIKLAKVDATQEQD--LAESYGVRGYPTLKFFRN-GSPI-DYSGGRQAD 404
+ + + ++ + PI LAKVDA E++ LA Y ++G+PTLK FRN G I +Y G R+A+
Sbjct: 81 KAAQELSKHDPPIVLAKVDANDEKNKPLATKYEIQGFPTLKIFRNQGKNIQEYKGPREAE 140
Query: 405 DIISWLKKKTGPPAVEVTSG*TG*RTYRCQYCYCIGFFSDQSSTRAKNF 551
I+ +LKK+ GP + E+ S + Y +G FS+ S T NF
Sbjct: 141 GIVEYLKKQVGPASKEIKSPEDATNLIDDKKIYIVGIFSELSGTEYTNF 189
Score = 57.2 bits (132), Expect = 8e-09
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +1
Query: 115 ENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 234
E VL L F+ ++ +++VEFYAPWCGHCK LAPEY
Sbjct: 40 EAVLTLDADGFDEAVAKHPFMVVEFYAPWCGHCKKLAPEY 79
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1
Query: 100 EVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAP 228
EV E +V++ + V + + +LVEFYAPWCGHCK LAP
Sbjct: 380 EVNDEPVKVVVADNVHDFVFKSGKNVLVEFYAPWCGHCKKLAP 422
Score = 47.2 bits (107), Expect = 9e-06
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +3
Query: 258 EEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFR-NGSPIDYSGGRQADDIISWLKK 428
+ + + +AK+DAT D+ + V+GYPTL F +G + Y GR AD+I+ ++KK
Sbjct: 432 KSDKDVVIAKMDATAN-DVPSEFDVQGYPTLYFVTPSGKMVPYESGRTADEIVDFIKK 488
>02_01_0001 -
3864-4049,4861-4917,5514-5648,5710-5808,5884-5952,
6419-6493,6619-6705,6873-6953,7021-7163,7262-7430,
7538-7667,7753-8255
Length = 577
Score = 72.5 bits (170), Expect = 2e-13
Identities = 30/63 (47%), Positives = 44/63 (69%)
Frame = +3
Query: 273 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVE 452
+ LAKVDAT++ DLA+ Y V+G+PT+ FF +G P DY+G R + I+SW+ KK P
Sbjct: 126 VALAKVDATEDTDLAQKYDVQGFPTILFFIDGVPKDYNGARTKEAIVSWVNKKLAPGVQN 185
Query: 453 VTS 461
+T+
Sbjct: 186 ITT 188
Score = 58.8 bits (136), Expect = 3e-09
Identities = 21/41 (51%), Positives = 32/41 (78%)
Frame = +1
Query: 112 EENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 234
E +V +LS ANF +++ +++VEFYAPWC HC++LAP+Y
Sbjct: 72 ETHVFLLSAANFSDFLASHRHVMVEFYAPWCAHCQALAPDY 112
Score = 35.9 bits (79), Expect = 0.022
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1
Query: 184 EFYAPWCGHCKSLAPEY 234
+ YAPWCGHC+ L P Y
Sbjct: 452 KIYAPWCGHCQELEPTY 468
>01_03_0161 +
13337265-13337297,13337880-13338017,13338211-13338308,
13338395-13338450,13338664-13338781,13338889-13338916,
13339021-13339112,13339321-13339477,13339569-13339693,
13339785-13339884,13339991-13340059
Length = 337
Score = 64.5 bits (150), Expect = 6e-11
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Frame = +3
Query: 273 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI--DYSGGRQADDIISWLKKKTG 437
+ +A +DA + +DLAE YGV GYPTLKFF G+ DY GGR+ DD + ++ +K G
Sbjct: 172 VVIANLDADKHKDLAEKYGVSGYPTLKFFPKGNKAGEDYDGGRELDDFVKFINEKCG 228
Score = 54.4 bits (125), Expect = 6e-08
Identities = 23/40 (57%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = +1
Query: 118 NVLVLSKANFETVI-STTEYILVEFYAPWCGHCKSLAPEY 234
+V+VL NF++++ + ILVEFYAPWCGHCK LAP Y
Sbjct: 120 SVVVLGPDNFDSIVLDENKDILVEFYAPWCGHCKHLAPIY 159
Score = 44.4 bits (100), Expect = 6e-05
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +3
Query: 279 LAKVDATQEQDLAESYGVRGYPTLKFFRNGS--PIDYSGGRQADDIISWLKKKTG 437
+AKVD + + + YGV GYPT+++F GS P Y G R A+ + ++ + G
Sbjct: 55 IAKVDCDEHKSVCSKYGVSGYPTIQWFPKGSLEPKKYEGQRSAEALAEFVNTEGG 109
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 190 YAPWCGHCKSLAPEY 234
Y CGHCK LAPEY
Sbjct: 26 YLVRCGHCKKLAPEY 40
>04_03_0988 -
21469811-21469831,21470823-21471047,21471327-21471634,
21471864-21472234,21472327-21472430,21473086-21473325
Length = 422
Score = 63.7 bits (148), Expect = 1e-10
Identities = 24/60 (40%), Positives = 37/60 (61%)
Frame = +1
Query: 52 VLIFTAIALLGLALGDEVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPE 231
+L+ + A +E P + V+ L +++FE + +Y+ V+FYAPWCGHCK LAPE
Sbjct: 21 LLLLLSFHAAAAAAAEEFPRDGRVIELDESSFEAALGAIDYLFVDFYAPWCGHCKRLAPE 80
Score = 55.6 bits (128), Expect = 3e-08
Identities = 26/57 (45%), Positives = 37/57 (64%)
Frame = +3
Query: 270 PIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGP 440
PI +AKV+A + + L YGV G+PTL F +G PI+Y+G R+AD ++ L K P
Sbjct: 94 PIIVAKVNADKYRKLGSKYGVDGFPTLMLFIHGVPIEYTGSRKADLLVRNLNKFVAP 150
>04_03_1011 -
21708503-21708544,21708689-21708898,21709000-21709112,
21709232-21709349,21709386-21709412,21709671-21709808,
21710069-21710194,21710279-21710467,21710598-21710885,
21710937-21711024,21711120-21711298
Length = 505
Score = 62.9 bits (146), Expect = 2e-10
Identities = 28/65 (43%), Positives = 43/65 (66%)
Frame = +1
Query: 37 NIAMRVLIFTAIALLGLALGDEVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCK 216
+ A+ +LI ++ +G+ +E+ +E VL L NF V++ +I+V+FYAPWCGHCK
Sbjct: 8 SFALAILISSSPTAVGVDATEEL--KEAVLTLDAGNFSEVVAKHPFIVVKFYAPWCGHCK 65
Query: 217 SLAPE 231
LAPE
Sbjct: 66 QLAPE 70
Score = 62.5 bits (145), Expect = 2e-10
Identities = 35/102 (34%), Positives = 58/102 (56%), Gaps = 4/102 (3%)
Frame = +3
Query: 258 EEESPIKLAKVDATQEQ--DLAESYGVRGYPTLKFFRNG-SPI-DYSGGRQADDIISWLK 425
+ E P+ LAKVDA E+ +L + YGV YPT+K +NG S + Y G R+AD I+ +LK
Sbjct: 99 KNELPVVLAKVDAYNERNKELKDKYGVYSYPTIKIMKNGGSDVRGYGGPREADGIVEYLK 158
Query: 426 KKTGPPAVEVTSG*TG*RTYRCQYCYCIGFFSDQSSTRAKNF 551
++ GP ++++ S + + +G F + + +NF
Sbjct: 159 RQVGPASLKLESAEEAAHSVVDKGVILVGVFPEFAGMEYENF 200
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +3
Query: 258 EEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRN-GSPIDYSGGRQADDIISWLKKKT 434
+++ I +AK+D T D+ + V GYPT+ F+ + G+ + Y G R A++IIS++ +
Sbjct: 412 QDDQDIVIAKMDGTVN-DIPTDFTVEGYPTIYFYSSSGNLLSYDGARTAEEIISFINENR 470
Query: 435 GPPA 446
GP A
Sbjct: 471 GPKA 474
Score = 40.7 bits (91), Expect = 8e-04
Identities = 15/39 (38%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +1
Query: 112 EENVLVLSKANFETVI-STTEYILVEFYAPWCGHCKSLA 225
++ V V+ N + ++ ++ + +L+EFYAPWCGHC+ A
Sbjct: 363 DQPVKVVVADNIDDIVFNSGKNVLLEFYAPWCGHCRKFA 401
>02_04_0214 -
20976977-20977171,20977499-20977611,20978041-20978158,
20978585-20978701,20978836-20978973,20979193-20979318,
20979827-20980015,20980539-20980863,20980977-20981134
Length = 492
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/56 (53%), Positives = 34/56 (60%)
Frame = +1
Query: 67 AIALLGLALGDEVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 234
A ALL LA E VL L NF V+ ++I+VEFYAPWCGHC LAPEY
Sbjct: 10 AFALLLLA-SSAAAEGEAVLTLDAGNFTEVVGAHDFIVVEFYAPWCGHCNQLAPEY 64
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/70 (38%), Positives = 47/70 (67%), Gaps = 4/70 (5%)
Frame = +3
Query: 264 ESPIKLAKVDATQE--QDLAESYGVRGYPTLKFFRN--GSPIDYSGGRQADDIISWLKKK 431
+ P+ LAKVDA+ + + LA +GV+GYPT++ R+ +Y+G R A I+++LK++
Sbjct: 75 DPPVVLAKVDASADLNRGLAGEHGVQGYPTIRILRDRGARSHNYAGPRDAAGIVAYLKRQ 134
Query: 432 TGPPAVEVTS 461
GP +VE+ +
Sbjct: 135 AGPASVEIAA 144
Score = 46.0 bits (104), Expect = 2e-05
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +1
Query: 148 ETVISTTEYILVEFYAPWCGHCKSLAP 228
E V ++ + +L+EFYAPWCGHC+ LAP
Sbjct: 382 EVVFNSGKNVLLEFYAPWCGHCQKLAP 408
>05_01_0410 -
3234455-3234466,3234851-3234950,3235037-3235161,
3235244-3235400,3235644-3235735,3235828-3235855,
3235949-3236066,3236411-3236466,3236556-3236653,
3236864-3236948,3237428-3237600
Length = 347
Score = 61.3 bits (142), Expect = 5e-10
Identities = 26/62 (41%), Positives = 37/62 (59%)
Frame = +1
Query: 49 RVLIFTAIALLGLALGDEVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAP 228
R + + + L+ A + ++VL L+++ FE + LVEFYAPWCGHCK LAP
Sbjct: 8 RKALASLLLLVAAAAAVSTASADDVLALTESTFEKEVGQDRAALVEFYAPWCGHCKKLAP 67
Query: 229 EY 234
EY
Sbjct: 68 EY 69
Score = 60.1 bits (139), Expect = 1e-09
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = +3
Query: 258 EEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI--DYSGGRQADDIISWLKKK 431
+++ + +A +DA + LAE YGV G+PTLKFF G+ DY GGR+ DD + ++ +K
Sbjct: 196 KQDEGVVIANLDADKHTALAEKYGVSGFPTLKFFPKGNKAGEDYDGGRELDDFVKFINEK 255
Query: 432 TG 437
G
Sbjct: 256 CG 257
Score = 54.8 bits (126), Expect = 4e-08
Identities = 23/40 (57%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = +1
Query: 118 NVLVLSKANFETVI-STTEYILVEFYAPWCGHCKSLAPEY 234
+V+VL+ F++V+ T+ +LVEFYAPWCGHCK LAP Y
Sbjct: 149 SVVVLTPETFDSVVLDETKDVLVEFYAPWCGHCKHLAPIY 188
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +3
Query: 273 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS--PIDYSGGRQADDIISWLKKK 431
+ +AKVD + + + YGV GYPT+++F GS P Y G R A+ + ++ +
Sbjct: 82 VLIAKVDCDEHKSVCSKYGVSGYPTIQWFPKGSLEPKKYEGQRTAEALAEYVNSE 136
>02_04_0182 +
20719782-20720033,20720502-20720605,20720693-20721066,
20721302-20721609,20721853-20722092
Length = 425
Score = 58.8 bits (136), Expect = 3e-09
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = +3
Query: 267 SPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGP 440
+PI +AKV+A + + L YGV G+PTL F +G+P +Y+G R+AD ++ LKK P
Sbjct: 97 TPIVVAKVNADKYKKLGSKYGVDGFPTLMLFDHGTPTEYTGSRKADLLVENLKKLVAP 154
Score = 56.0 bits (129), Expect = 2e-08
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +1
Query: 100 EVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPE 231
++P + VL L NF+ + + V+FYAPWCGHCK LAP+
Sbjct: 41 QIPRDGRVLELDDGNFDAAVRAAGLLFVDFYAPWCGHCKRLAPQ 84
>06_01_0452 +
3198475-3198962,3199062-3199191,3199332-3199497,
3199765-3199883,3200056-3200136,3200236-3200322,
3200644-3200715,3200791-3200859,3201349-3201426,
3201540-3201680,3202333-3202386,3202465-3202581
Length = 533
Score = 58.4 bits (135), Expect = 4e-09
Identities = 27/95 (28%), Positives = 48/95 (50%)
Frame = +3
Query: 267 SPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPPA 446
S + AK+D + A + GV+G+PT+ F NG+ ++G D I++W++KKTG PA
Sbjct: 119 SAVAFAKLDGERYPKAASAVGVKGFPTVLLFVNGTEHQFTGLHTKDAIVTWVRKKTGAPA 178
Query: 447 VEVTSG*TG*RTYRCQYCYCIGFFSDQSSTRAKNF 551
+ S + + + +G F + + F
Sbjct: 179 SRIQSKDSAEEFLKKDQTFAVGLFKNFEGAEYEEF 213
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 121 VLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 234
VLVL N + +L+ YAPWC L P +
Sbjct: 70 VLVLDNDNARRAVEENAEVLLLGYAPWCERSAQLMPRF 107
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/45 (24%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +1
Query: 97 DEVPTEENVL--VLSKANFETVISTTEYILVEFYAPWCGHCKSLA 225
+ VP E+ + V+ + +V+ + + + +E +APWC C++++
Sbjct: 399 EPVPEEKGPIEKVVGRTFDSSVLESPQNVFLEVHAPWCVDCEAIS 443
>09_04_0345 +
16876489-16876614,16876718-16876876,16877989-16878102,
16878701-16878882,16879142-16879241,16879597-16879638,
16879818-16879994,16880084-16880175,16880633-16880779,
16880832-16881036
Length = 447
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/49 (42%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Frame = +1
Query: 94 GDEVPTEENVLV-LSKANFETVISTTEYI-LVEFYAPWCGHCKSLAPEY 234
G TE + + L+ NF+ +++ ++ + +VEF+APWCGHCK LAPE+
Sbjct: 157 GSSEKTEPSASIELNSQNFDKLVTKSKDLWIVEFFAPWCGHCKKLAPEW 205
Score = 48.8 bits (111), Expect = 3e-06
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 192 CSMVRPLQVSGAGIRQGSHKAAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS 371
C + P+ AG+ +G +A +DA ++LA+ YG+RG+PT+K F G
Sbjct: 62 CQQLTPIWEKAAGVLKGV---------ATVAALDADAHKELAQEYGIRGFPTIKVFVPGK 112
Query: 372 -PIDYSGGRQADDIISW 419
P+DY G R I+ +
Sbjct: 113 PPVDYQGARDVKPIVEF 129
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/37 (48%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Frame = +1
Query: 121 VLVLSKANFET-VISTTEYILVEFYAPWCGHCKSLAP 228
VL + NF++ V+++ +LVEF+APWCGHC+ L P
Sbjct: 31 VLQFNPNNFKSKVLNSNGVVLVEFFAPWCGHCQQLTP 67
>07_03_0651 +
20287661-20287701,20288034-20288124,20288737-20288831,
20289433-20289523,20290066-20290250,20290590-20290647,
20290812-20290852,20290935-20291009,20292298-20292354,
20292480-20292546,20292754-20292900,20292986-20293210,
20293332-20293493,20293570-20293647,20293735-20293812
Length = 496
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +3
Query: 258 EEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGG 392
E + I LAKVD T+E DL + ++GYP+++ FR GS + + G
Sbjct: 205 EMDGRIILAKVDCTEEIDLCRRHHIQGYPSIRIFRKGSDLKENQG 249
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 94 GDEVPT--EENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 234
GD+V ++ + LS NF++ ++V FYAPWC L P +
Sbjct: 143 GDDVEENHDDGSVPLSSRNFDSYSHQYPVLVVNFYAPWCYWSNRLKPSW 191
>07_01_0621 - 4606739-4606894,4606976-4607098,4608199-4608288
Length = 122
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +3
Query: 285 KVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVEVTS 461
KVD + +++AE Y V PT F ++G+ D G + DD+ + + K G A ++
Sbjct: 64 KVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKHVGATAASASA 122
Score = 29.9 bits (64), Expect = 1.5
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +1
Query: 175 ILVEFYAPWCGHCKSLAPEY 234
++++F A WCG C+ +AP +
Sbjct: 31 VIIDFTASWCGPCRFIAPVF 50
>04_04_0598 - 26514226-26514545,26516080-26516302
Length = 180
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 258 EEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPID 380
E E +K K++ + D+A YGVR PT+ F+NG D
Sbjct: 119 EYEGKLKCYKLNTDENPDIASQYGVRSIPTMMIFKNGEKKD 159
Score = 32.3 bits (70), Expect = 0.27
Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 109 TEENVLVLSKANFETVISTTEY-ILVEFYAPWCGHCKSLAP 228
T V ++K+ +++++ +E +LV ++A WCG CK + P
Sbjct: 71 TSIQVPEVTKSTWQSLVMESELPVLVGYWATWCGPCKMIDP 111
>10_08_0532 +
18580579-18580746,18581923-18581997,18582659-18583887,
18584853-18585013,18585272-18585279,18587737-18588768
Length = 890
Score = 36.7 bits (81), Expect = 0.013
Identities = 18/69 (26%), Positives = 35/69 (50%)
Frame = +3
Query: 243 SHKAAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWL 422
+H A + + L +V+A ++ +++E+YGV P F + G +D G + + +
Sbjct: 43 AHLAVDFSHAVFL-RVEAEEQPEISEAYGVTAVPYFVFLKEGKTVDTLEGANPASLANKV 101
Query: 423 KKKTGPPAV 449
K GP +V
Sbjct: 102 AKLAGPASV 110
>07_01_0656 - 4912985-4913143,4913700-4913822,4914081-4914215
Length = 138
Score = 35.9 bits (79), Expect = 0.022
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Frame = +1
Query: 88 ALGDEVPTEENVLVLSKANFETVI----STTEYILVEFYAPWCGHCKSLAPEY 234
A G+E V V SKA ++ + +TT+ ++++F A WCG CK + P +
Sbjct: 13 AAGEEGGESAVVAVHSKAKWDELWDAHKNTTKLVVIDFSASWCGPCKMMEPVF 65
>03_06_0089 -
31565454-31565517,31565594-31565618,31565743-31565927,
31566302-31566405,31567148-31567366,31567721-31567903
Length = 259
Score = 35.5 bits (78), Expect = 0.029
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 124 LVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPE 231
L + +E +S + +VEFYA WC C+ LAP+
Sbjct: 125 LAANATPYEEALSNGKPTVVEFYADWCEVCRELAPD 160
>02_05_0085 -
25697860-25698142,25698631-25698946,25700481-25700518,
25700955-25701036,25701815-25702016
Length = 306
Score = 35.5 bits (78), Expect = 0.029
Identities = 13/34 (38%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = +1
Query: 130 LSKANFETVISTTEY-ILVEFYAPWCGHCKSLAP 228
++K+ +++++ +E +LVEF+A WCG CK + P
Sbjct: 111 VTKSTWQSLVVESELPVLVEFWASWCGPCKMIDP 144
Score = 34.7 bits (76), Expect = 0.051
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +3
Query: 258 EEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPID-YSGGRQADDIISWLKKKT 434
E E + K++ + D+A +G+R PT+ F+NG D G ++S + K
Sbjct: 152 EYEGKLNCYKLNTDENPDIATQFGIRSIPTMMIFKNGEKKDAVIGAVPESTLVSSIDKYI 211
Query: 435 G 437
G
Sbjct: 212 G 212
>04_04_1575 + 34548774-34549109,34549979-34550185
Length = 180
Score = 33.9 bits (74), Expect = 0.089
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 252 AAEE-ESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI 377
AAEE E +K+ K+D L E Y V G P+L F++G +
Sbjct: 110 AAEEYEGRLKIVKIDHDANPQLIEEYKVYGLPSLILFKDGKEV 152
Score = 33.1 bits (72), Expect = 0.16
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 121 VLVLSKANFETVISTTEY-ILVEFYAPWCGHCKSLAP 228
V + ++ FE + ++ +LV+F A WCG C+ +AP
Sbjct: 69 VRFIGQSEFEAEVLQSDLPVLVDFVADWCGPCRLIAP 105
>08_02_0497 -
17811413-17811529,17811644-17811724,17812693-17812815,
17812945-17813193
Length = 189
Score = 33.5 bits (73), Expect = 0.12
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +3
Query: 252 AAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF 359
A E E+ KVD E +LA VRG PTL FF
Sbjct: 126 AVEYENNALFVKVDTDDEYELARDMQVRGLPTLYFF 161
Score = 29.1 bits (62), Expect = 2.5
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 175 ILVEFYAPWCGHCKSLAPE 231
++V+FYA WCG C +A +
Sbjct: 103 LIVDFYATWCGPCVLMAQD 121
>05_02_0053 -
6152204-6152329,6152817-6152981,6154698-6154883,
6155055-6155078,6155649-6155822
Length = 224
Score = 33.1 bits (72), Expect = 0.16
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 175 ILVEFYAPWCGHCKSLAP 228
++VEFY WCG C++L P
Sbjct: 110 VIVEFYGTWCGSCRALFP 127
>07_03_0550 - 19356710-19357763,19358941-19359256,19359552-19359609
Length = 475
Score = 32.3 bits (70), Expect = 0.27
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +1
Query: 82 GLALGDEVPTEENVLVLSKANFETVI---STTEYILVEFYAPWCGHCKSLAPEY 234
G A ++ V+ L++A E ++ S E LV YAPWC C+++ Y
Sbjct: 350 GSAGAPDIFESSGVVSLTRAGVENLLRLESRAEPWLVVLYAPWCPFCQAMEASY 403
>01_06_1771 + 39787895-39788223,39788419-39788518,39788640-39788774
Length = 187
Score = 32.3 bits (70), Expect = 0.27
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 88 ALGDEVPTEENVLVLSKANFETVISTT--EYILVEFYAPWCGHCKSLAPEY 234
A + V V ++K F ++ + + ++++ Y WCG CK +AP++
Sbjct: 71 AEAEAVAVTGQVTEVNKDTFWPIVKSAGPKVVVLDMYTQWCGPCKVMAPKF 121
>09_04_0744 -
19867604-19867686,19868075-19869872,19870777-19870801,
19872313-19872710
Length = 767
Score = 31.5 bits (68), Expect = 0.48
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 286 FASLIGDSSSAALWLPWRIPAPETCSGRTME 194
FA + SSS++ WLPWRI + R E
Sbjct: 89 FADTLSSSSSSSWWLPWRIAERHRVAARIRE 119
>05_06_0017 + 24964168-24964275,24965384-24965506,24965617-24965751
Length = 121
Score = 31.5 bits (68), Expect = 0.48
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +3
Query: 255 AEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLK 425
A++ + KVD + + +AE + V PT F + G D G D++ S L+
Sbjct: 60 AKKHTNAVFLKVDVDELKPIAEQFSVEAMPTFLFMKEGDVKDRVVGAMKDELASKLE 116
Score = 31.1 bits (67), Expect = 0.63
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 148 ETVISTTEYILVEFYAPWCGHCKSLAPEY 234
E S + ++++F A WCG C+ +AP +
Sbjct: 28 EEANSAKKLVVIDFTASWCGPCRIIAPVF 56
>07_01_0159 - 1116786-1117153,1117251-1119936
Length = 1017
Score = 31.1 bits (67), Expect = 0.63
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 243 SHKAAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQ 398
SH PI L+K+ + DL++++ PT FRN + I G RQ
Sbjct: 575 SHNNLTGSIPIALSKLQFLTQLDLSDNHLEGQVPTDGVFRNATAISLEGNRQ 626
>03_06_0376 +
33479776-33479958,33481055-33481236,33481345-33481469,
33481858-33482057,33482629-33482762,33483095-33483158,
33483764-33484441,33484723-33484839
Length = 560
Score = 30.7 bits (66), Expect = 0.83
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 312 LAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTG 437
L YGVRG+P + + + Y G + ++ + K+ TG
Sbjct: 123 LFSRYGVRGFPAILLVNETTMVRYWGPKDLSSLVDFYKETTG 164
>06_01_0825 +
6233525-6233740,6234274-6234461,6234544-6234668,
6234858-6234917,6235043-6235074
Length = 206
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +3
Query: 324 YGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTG-PPAVEVTSG*TG*RTYRCQYC 500
YG+ GYPTL + + Y G R + ++ +G P+++ G R +C
Sbjct: 140 YGIHGYPTLFLINSTVRVRYHGPRTVKSLAAFYNDVSGINPSMDPAVGDDNIEPKRDYHC 199
Query: 501 YC 506
C
Sbjct: 200 LC 201
>01_01_0474 -
3488739-3488876,3488996-3489118,3489878-3489991,
3490416-3490452,3490584-3490675,3490878-3490956,
3491640-3491734,3491858-3491991,3492560-3492833,
3493743-3494015,3494976-3495512
Length = 631
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +1
Query: 118 NVLVLS-KANFETVISTT----EYILVEFYAPWCGHCKSLAPEY 234
NV V+S K N++ I+ + ++ F A WCG C+ +AP Y
Sbjct: 522 NVHVISNKENWDHKIAEANKDGKIVIANFSAAWCGPCRVIAPVY 565
Score = 29.1 bits (62), Expect = 2.5
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 288 VDATQEQDLAESYGVRGYPTLKFFRNGSPID 380
+D + D + S+ +R PT F +NG +D
Sbjct: 580 IDVDELMDFSSSWDIRATPTFFFLKNGEQVD 610
>10_08_0426 -
17817975-17818582,17819068-17819209,17819648-17819745,
17820070-17821897,17822331-17822738,17822891-17822943,
17823461-17823877,17824401-17824605
Length = 1252
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 127 VLSKANFETVISTTEYILVEFYAPWCGHCKSLAPE 231
VL++ANF + I +IL+ PW G +SL E
Sbjct: 45 VLTRANFSSQIRLHPHILLVVTMPWYGESRSLMAE 79
>01_01_0829 +
6471032-6471870,6472490-6472685,6472772-6472956,
6473206-6473539,6473629-6473833,6474927-6475033,
6475117-6475269
Length = 672
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 273 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI 377
I KVD ++ +A + VR PT K ++NG+ +
Sbjct: 618 ISFLKVDISESPAVARAENVRTVPTFKIYKNGTRV 652
>07_01_0353 + 2563807-2564496,2564595-2564660,2564853-2564918,
2565044-2565115,2565196-2565261,2565355-2565417,
2565505-2565570,2565963-2566062,2567403-2567504,
2567772-2567995,2568200-2568314,2568653-2568763,
2568873-2569088,2569426-2569624,2570690-2570790,
2570872-2570919,2571052-2571236,2571345-2571462,
2571572-2571699,2571981-2572107,2572529-2572647,
2572770-2572938,2573078-2573162,2573247-2573320,
2573449-2573568,2574068-2574251,2574343-2574464,
2574548-2574755,2574885-2574958,2575047-2575185,
2575275-2575456,2575852-2576007,2576153-2576284,
2576508-2576566,2576913-2576945,2577065-2577196,
2577303-2577479
Length = 1675
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +3
Query: 333 RGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVEVTSG*TG*RTY 485
RG+ T + G+ YSGG++ I WL+ G P + G G RTY
Sbjct: 1459 RGFHTNLYAVRGT---YSGGKEGKSKIQWLRSMVGSPDLISIPGEIG-RTY 1505
>09_04_0038 -
13996505-13996836,13997047-13997077,13997307-13997420,
13997546-13997686,13997787-13997851,13997943-13998039,
13998096-13998257,13998360-13998473,14001263-14001311,
14001967-14002047,14003504-14003561,14003671-14004031,
14004129-14004213,14004320-14004591,14004712-14004914,
14005419-14005494
Length = 746
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 255 AEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPID 380
AE+ + KVD + +A + V P+ F RNG ID
Sbjct: 685 AEKHRNVVFLKVDIDELNSVAYRWNVSSVPSFFFVRNGKEID 726
>05_01_0489 -
4077365-4077502,4078105-4078227,4079019-4079135,
4079243-4079263
Length = 132
Score = 28.7 bits (61), Expect = 3.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 175 ILVEFYAPWCGHCKSLAPEY 234
++ F A WCG C+ +AP Y
Sbjct: 47 VVANFSASWCGPCRVIAPIY 66
>04_03_0975 -
21370715-21370877,21371227-21371319,21371383-21371466,
21371745-21371869,21372360-21372600,21373640-21373734
Length = 266
Score = 28.7 bits (61), Expect = 3.4
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +1
Query: 175 ILVEFYAPWCGHCK 216
+L+EF+A WCG C+
Sbjct: 36 VLIEFWASWCGPCR 49
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 252 AAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNG 368
A E IK K+D +A SY + PT+ F++G
Sbjct: 59 AQEYAGRIKCYKLDTDDYPQVATSYSIERIPTVLLFKDG 97
>03_02_0863 - 11889492-11889761,11890257-11890421,11890518-11890637
Length = 184
Score = 28.7 bits (61), Expect = 3.4
Identities = 8/19 (42%), Positives = 16/19 (84%)
Frame = +1
Query: 175 ILVEFYAPWCGHCKSLAPE 231
++V+F++P CG C++L P+
Sbjct: 22 VIVDFFSPGCGGCRALHPK 40
>03_02_0621 -
9923163-9923245,9924163-9924338,9924437-9924495,
9924952-9924984,9925060-9925185
Length = 158
Score = 28.7 bits (61), Expect = 3.4
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 181 VEFYAPWCGHCKSL 222
V+F PWC HCK+L
Sbjct: 63 VKFCVPWCKHCKNL 76
>03_01_0480 -
3676529-3676687,3676767-3676931,3677044-3677220,
3678170-3678273,3678700-3678843,3679831-3679898,
3680059-3680162,3680759-3680767,3681572-3681657,
3681918-3683373
Length = 823
Score = 28.7 bits (61), Expect = 3.4
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = +1
Query: 148 ETVISTTEYILVEFYAPWCGHCKSLAPE 231
+ ++++ + +V F++P CG CK+L P+
Sbjct: 689 QLLLASDKLTVVHFFSPSCGACKALHPK 716
>02_05_0792 -
31777775-31778220,31778506-31778630,31778724-31778911,
31779716-31779892
Length = 311
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 94 GDEVPT-EENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 234
GD V E + + L+KA ++ +YI V FYA WC + P +
Sbjct: 52 GDPVGVIEGDEVTLAKAITLLHMNKDDYIAVLFYASWCPFSQECKPNF 99
>07_03_1717 -
28958309-28958581,28958678-28958842,28958944-28959120,
28959315-28959539
Length = 279
Score = 28.3 bits (60), Expect = 4.4
Identities = 8/19 (42%), Positives = 16/19 (84%)
Frame = +1
Query: 175 ILVEFYAPWCGHCKSLAPE 231
++V+F++P CG C++L P+
Sbjct: 116 VVVDFFSPGCGGCRALHPK 134
>03_06_0330 -
33178114-33178206,33178317-33178382,33179704-33179826,
33179930-33180067
Length = 139
Score = 28.3 bits (60), Expect = 4.4
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 175 ILVEFYAPWCGHCKSLAPEY 234
I+++F A WCG C+ + P +
Sbjct: 47 IVIDFSATWCGPCRFIEPAF 66
>02_04_0285 - 21585048-21585173,21585302-21585355,21585512-21585952
Length = 206
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 288 VDATQEQ-DLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGP 440
+D EQ ++A+ ++ P F++NG ++ R + II+ ++K T P
Sbjct: 149 IDEYDEQSEVADRLRIKVVPLFHFYKNGVLLEAFATRDKERIIAAIQKYTAP 200
>09_02_0042 -
3402424-3402534,3403242-3403345,3403448-3403562,
3404344-3404391,3404519-3404608,3404819-3404893,
3405001-3405153,3405695-3405779,3408051-3408121,
3408243-3408293,3409037-3409453,3409529-3409660,
3409779-3409892,3411113-3411179,3411264-3411397,
3411486-3411701,3412627-3413418
Length = 924
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/40 (27%), Positives = 24/40 (60%)
Frame = +1
Query: 295 QLKNRISPRATVCEDTRLSSSSGMAVLLTIQVVVKLMTSS 414
Q+K R+ R +C+D+ L S+S A +T+ + ++ ++
Sbjct: 718 QIKRRLKERDMICDDSELFSASCYAAKVTLTALGEMFQAA 757
>05_07_0349 - 29448121-29448513
Length = 130
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 188 SMLHGAATASLWRRNTPRQPQSC*RRISYQTSES*RNSRTGSRRE 322
S +HG+ + L R N SC RR+ +Q E ++R+G R E
Sbjct: 66 SEVHGSRSKPLPRSNVTMVADSCTRRMGHQ-HELDHSARSGKREE 109
>01_01_0255 +
2079112-2079196,2079334-2079514,2079712-2079853,
2079934-2080003,2080140-2080303
Length = 213
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 330 VRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTGPPAV 449
VR + T K F P+ D GG +A DII W +++ V
Sbjct: 5 VRTHRTTKLFGRERPLHDALGGHKAADIILWRERRVSASIV 45
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,548,828
Number of Sequences: 37544
Number of extensions: 283542
Number of successful extensions: 850
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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