Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060392.seq
(560 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 103 1e-22
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 71 9e-13
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 62 4e-10
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 59 2e-09
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 57 1e-08
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 53 1e-07
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 51 6e-07
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 50 1e-06
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 6e-05
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 44 6e-05
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 36 0.017
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 35 0.052
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 35 0.052
SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 31 0.49
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 31 0.64
SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 29 2.0
SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_8819| Best HMM Match : I-set (HMM E-Value=0) 29 3.4
SB_31331| Best HMM Match : Thioredoxin (HMM E-Value=1.2) 28 4.5
SB_32410| Best HMM Match : DEP (HMM E-Value=2e-09) 28 4.5
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 103 bits (246), Expect = 1e-22
Identities = 48/97 (49%), Positives = 67/97 (69%)
Frame = +3
Query: 261 EESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGP 440
E+S IKLAKVDAT E L E + V+GYPT+KFF++G P +Y+GGR A +I+SWL KKTGP
Sbjct: 73 EKSEIKLAKVDATAETKLGEKFQVQGYPTIKFFKDGKPSEYAGGRTAPEIVSWLNKKTGP 132
Query: 441 PAVEVTSG*TG*RTYRCQYCYCIGFFSDQSSTRAKNF 551
PA ++ + + + + +GFF+D+ S AK F
Sbjct: 133 PAKDLATA-DAMKDFITKEVAVVGFFTDKESDAAKAF 168
Score = 83.0 bits (196), Expect = 2e-16
Identities = 33/63 (52%), Positives = 49/63 (77%)
Frame = +1
Query: 46 MRVLIFTAIALLGLALGDEVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLA 225
M++L +AL+ LA +E+ EE+VLVL++ NF+ ++ +++LVEFYAPWCGHCK+LA
Sbjct: 1 MKLLPVLLLALVSLAYSEEIKEEEDVLVLTEKNFDEAVAANKHVLVEFYAPWCGHCKALA 60
Query: 226 PEY 234
PEY
Sbjct: 61 PEY 63
Score = 49.2 bits (112), Expect = 2e-06
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +1
Query: 31 ADNIAMRVLIFTAIALLGLALGDEVPTE---ENVLVLSKANFETVISTTEY-ILVEFYAP 198
++N+ V F L L E+P + + V VL NF+ V + + VEFYAP
Sbjct: 353 SENVKEFVQAFLDKKLKPHLLSAEIPEDWDSKPVKVLCGKNFDEVARNKDKNVFVEFYAP 412
Query: 199 WCGHCKSLAP 228
WCGHCK LAP
Sbjct: 413 WCGHCKQLAP 422
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Frame = +3
Query: 258 EEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF-RNGSPIDYSGGRQADDIISWLK--- 425
++ + I +AK+D+T + E V +PT+K+F + G +DY+GGR DD + +L+
Sbjct: 432 KDHADIVVAKMDSTANE--VEGVKVHSFPTIKYFPKEGEAVDYNGGRTLDDFVKFLESGG 489
Query: 426 KKTGPPAVE 452
K PA E
Sbjct: 490 KAGNEPAAE 498
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 72.5 bits (170), Expect = 2e-13
Identities = 31/46 (67%), Positives = 35/46 (76%)
Frame = +1
Query: 97 DEVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 234
DEV E++V VL+ NF+ VI ILVEFYAPWCGHCKSLAPEY
Sbjct: 55 DEVKEEDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSLAPEY 100
Score = 66.9 bits (156), Expect = 1e-11
Identities = 27/68 (39%), Positives = 43/68 (63%)
Frame = +3
Query: 237 QGSHKAAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIIS 416
+ + K + P+ AK+DAT D+A+ + V GYPTLK FR G+P +Y G R+ I+
Sbjct: 102 KAAKKMKLNDPPVPFAKMDATVASDIAQRFDVSGYPTLKIFRKGTPYEYEGPREESGIVE 161
Query: 417 WLKKKTGP 440
++KK++ P
Sbjct: 162 YMKKQSDP 169
Score = 64.5 bits (150), Expect = 6e-11
Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Frame = +3
Query: 249 KAAEE----ESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIIS 416
KAA+E + PI LA VDAT E +LA+ Y V+GYPTLK FR G +Y G R I S
Sbjct: 217 KAAQELQKHDPPIPLAIVDATIESELAQKYEVQGYPTLKVFRKGKATEYKGQRDQYGIAS 276
Query: 417 WLKKKTGP 440
+++ + GP
Sbjct: 277 YMRSQVGP 284
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/43 (55%), Positives = 29/43 (67%)
Frame = +1
Query: 106 PTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 234
P L L+K NF V++ +LVEF+APWCGHCK LAPEY
Sbjct: 173 PPPVAALTLTKENFTEVVNRESLMLVEFFAPWCGHCKQLAPEY 215
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Frame = +3
Query: 249 KAAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNG---SPIDYSGGRQADDIISW 419
K + I +AK+DAT D+ +Y V G+PT+ F + +PI + GGR+ D+I +
Sbjct: 568 KHFRNDKNIVIAKIDATAN-DVPSTYAVEGFPTIYFATSKDKKNPIKFDGGRELKDLIKF 626
Query: 420 LKKK 431
+++K
Sbjct: 627 VEEK 630
Score = 33.1 bits (72), Expect = 0.16
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 112 EENVLVLSKANFETVISTTEYILVEFYAPWCG 207
E +V+ K E V + +L+EFYAPWCG
Sbjct: 525 EPVTVVVGKTFDEIVNDPKKDVLIEFYAPWCG 556
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 70.5 bits (165), Expect = 9e-13
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Frame = +3
Query: 258 EEESPIKLAKVDATQE-QDLAESYGVRGYPTLKFFRNGS-PIDYSGGRQADDIISWLKKK 431
+ + P+ LAKVD T+ +D YGV GYPTLK FRNG DY G R + II ++KK+
Sbjct: 586 KNDPPVPLAKVDCTEAGKDTCSKYGVSGYPTLKIFRNGEMSKDYDGPRDSSGIIRYMKKQ 645
Query: 432 TGPPAVEVTS 461
GP +VE+ S
Sbjct: 646 AGPSSVEIKS 655
Score = 56.8 bits (131), Expect = 1e-08
Identities = 22/39 (56%), Positives = 31/39 (79%)
Frame = +1
Query: 118 NVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 234
+VL L +NF++ ++ + +LVEF+APWCGHCK LAPEY
Sbjct: 539 DVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEY 577
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/39 (53%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Frame = +1
Query: 121 VLVLSKANFETVIST-TEYILVEFYAPWCGHCKSLAPEY 234
V V+ NF+ +++ T+ +L+EFYAPWCGHCKSL P+Y
Sbjct: 864 VKVVVGENFKEIVNDPTKDVLIEFYAPWCGHCKSLEPKY 902
Score = 31.9 bits (69), Expect = 0.37
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 324 YGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTG 437
+G+ +PTLK FR G P DY+G + + S++ + G
Sbjct: 448 FGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLG 486
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 61.7 bits (143), Expect = 4e-10
Identities = 24/42 (57%), Positives = 32/42 (76%)
Frame = +1
Query: 109 TEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 234
T+ V+ L+K NF+ V++ ++ LVEFYAPWCGHCK LAP Y
Sbjct: 20 TQGKVIDLTKDNFDEVVNGEKFALVEFYAPWCGHCKQLAPTY 61
Score = 61.7 bits (143), Expect = 4e-10
Identities = 27/65 (41%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Frame = +3
Query: 249 KAAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS--PIDYSGGRQADDIISWL 422
+A + S + +AKVDA ++DL + V+G+PT+K+F GS P +Y+GGR +D I ++
Sbjct: 66 EAYTQSSDVIIAKVDADGDRDLGSRFDVKGFPTIKYFPKGSTTPEEYNGGRDINDFIKFI 125
Query: 423 KKKTG 437
++KTG
Sbjct: 126 EEKTG 130
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 59.3 bits (137), Expect = 2e-09
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = +1
Query: 85 LALGDEVPTEENVLV-LSKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 234
L D VP +E L+ L +NFE + +++LV+FYAPWC HCK +AP+Y
Sbjct: 123 LMASDGVPDDEPTLLELDDSNFEPAVQKHKFVLVDFYAPWCFHCKKMAPDY 173
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +1
Query: 106 PTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAP 228
P VL L+ NF I EY+LV+FYAPWC C+ L+P
Sbjct: 48 PASPAVLNLNDQNFNETIKKNEYVLVDFYAPWCSDCQRLSP 88
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 56.8 bits (131), Expect = 1e-08
Identities = 22/39 (56%), Positives = 31/39 (79%)
Frame = +1
Query: 118 NVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 234
+VL L +NF++ ++ + +LVEF+APWCGHCK LAPEY
Sbjct: 14 DVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEY 52
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/42 (52%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Frame = +1
Query: 112 EENVLVLSKANFET-VISTTEYILVEFYAPWCGHCKSLAPEY 234
+E+V+ L+ NFE V+++ + LVEF+APWCGHC+ LAPE+
Sbjct: 78 KEDVVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEW 119
Score = 46.8 bits (106), Expect = 1e-05
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +3
Query: 252 AAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNG-----SPIDYSGGRQADDIIS 416
A E + +K+ +DAT A Y V+GYPT+K F G S DY GGR A DII
Sbjct: 123 ATELKGKVKVGALDATVHTVTASRYQVQGYPTIKVFAAGIKNSHSVEDYQGGRTASDIIQ 182
Query: 417 WLKKK 431
+ K
Sbjct: 183 YALDK 187
Score = 35.9 bits (79), Expect = 0.023
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +3
Query: 306 QDLAESYGVRGYPTLKFF--RNGSPIDYSGGRQADDII 413
Q + Y +RG+PT+K F SP DY+G R A I+
Sbjct: 5 QSVGGPYNIRGFPTIKIFGANKNSPQDYNGQRTAQGIV 42
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +1
Query: 100 EVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPE 231
E+P+E V LS F++ + +++LV FYAPWCGHCK PE
Sbjct: 192 EIPSE--VYHLSDTTFKSFVKKKKHVLVMFYAPWCGHCKKAKPE 233
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +1
Query: 97 DEVP---TEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 234
DE P T V+ L F+ ++ +LV FYAPWCGHCK++ PEY
Sbjct: 73 DEKPWSDTPSEVVHLRDDMFDDFVAKNPSVLVMFYAPWCGHCKAMKPEY 121
Score = 35.9 bits (79), Expect = 0.023
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 273 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWL-KKKTGPP 443
I A VD T+E + + +GV GY F + Y+ GR+A D I ++ + GPP
Sbjct: 268 IAYAAVDCTKEMAVCQQFGVEGY----FNYGKNDFKYTSGREAKDFIQFMDDPREGPP 321
Score = 33.9 bits (74), Expect = 0.091
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +3
Query: 258 EEESPIKLAKVDATQEQDLAESYGVRGYPT 347
E+E P LA VDAT+E L + + V GYPT
Sbjct: 130 EQEIPGVLAAVDATKEAALGKRFKVEGYPT 159
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/43 (48%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Frame = +1
Query: 112 EENVLV--LSKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 234
E++ LV L ++F ++ TE++LV FYAPWCGHCK+ P+Y
Sbjct: 144 EDSSLVKQLDGSDFWGYLNNTEHVLVMFYAPWCGHCKNAKPKY 186
Score = 44.8 bits (101), Expect = 5e-05
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 82 GLALGDEVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 234
G D + V+ L+ + + I + E +LV ++APWCGHC + P Y
Sbjct: 39 GYPTSDWSKDDSKVVFLTDESHDEFIKSHENVLVMYFAPWCGHCNEMKPNY 89
Score = 44.4 bits (100), Expect = 6e-05
Identities = 24/68 (35%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Frame = +3
Query: 249 KAAE--EESPIKL-AKVDATQEQDLAESYGVRGYPTLKFFRNGS-PIDYSGGRQADDIIS 416
KAAE ++ P ++ AK+D T+ D+ + V GYPTL+++ G ++Y G R +D+IS
Sbjct: 188 KAAETFKDQPNRVFAKLDCTKFGDVCDKEEVNGYPTLRYYLYGKFVVEYDGDRVTEDLIS 247
Query: 417 WLKKKTGP 440
++++ P
Sbjct: 248 FMEEPPLP 255
Score = 36.3 bits (80), Expect = 0.017
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = +3
Query: 258 EEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWL 422
+E++ LA VD T+ +D+A+ + GYPT+K ++ + + + ++ L
Sbjct: 98 DEDANCNLAAVDCTKHKDVAKKVALAGYPTVKLYKASNTAKAASAEEDSSLVKQL 152
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 45.2 bits (102), Expect = 4e-05
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +1
Query: 130 LSKANFETVISTTEYILVEFYAPWCGHCKSLAPE 231
L+ NF+ +I + +LV+FYAPWC HC+ L P+
Sbjct: 25 LNAQNFDQMIREKDIMLVDFYAPWCHHCQELLPQ 58
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 44.4 bits (100), Expect = 6e-05
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 112 EENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 234
E + L+ +F+ + E +LV+FYAPWC C +L P+Y
Sbjct: 21 ENPIFELTDQDFDNFLKDKEVMLVDFYAPWCSDCDNLRPKY 61
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 44.4 bits (100), Expect = 6e-05
Identities = 19/58 (32%), Positives = 35/58 (60%)
Frame = +3
Query: 255 AEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKK 428
++E+ + +AKVD T + +L +R YPT+K + +G Y+G R A+D+ ++ K
Sbjct: 13 SKEKRDLTIAKVDCTSDVNLCVKQNIRAYPTMKLYYDGDIKRYTGRRNAEDMKVFVDK 70
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +1
Query: 109 TEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAP 228
+E V +L+K F+ I + V+FYAPWC HC LAP
Sbjct: 88 SEAGVHILTKNTFDKHIELGLHF-VKFYAPWCIHCIKLAP 126
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 330 VRGYPTLKFFRNG-SPIDYSGGRQADDIISWL 422
+ GYPTL F++G +YSG R D + ++
Sbjct: 146 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 177
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +1
Query: 127 VLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 234
V SK F V+++ + +V+FYAPWCG C AP+Y
Sbjct: 438 VNSKNFFTDVLASEDAWVVDFYAPWCGPCMRFAPKY 473
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 270 PIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLK 425
P+ VD T L Y +R YPT + N P + G A DII +++
Sbjct: 335 PVGFGTVDCTVHSQLCHQYNIRSYPTTILYNNSQPHQFIGHHNALDIIEFVE 386
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 85 LALGDEVPTEENVLVLSKANF-ETVISTTEYILVEFYAPWCGHCKSLAPEY 234
+AL + NV L +F +V S + V+F+APWC C L PEY
Sbjct: 274 IALFAKESVSSNVHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEY 324
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 38.7 bits (86), Expect = 0.003
Identities = 13/35 (37%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Frame = +1
Query: 136 KANFETVISTTE--YILVEFYAPWCGHCKSLAPEY 234
+A F +VI+ T+ ++++FYA WCG C+ + P++
Sbjct: 18 RAEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKF 52
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 36.3 bits (80), Expect = 0.017
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = +1
Query: 118 NVLVL---SKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 234
NV VL S+ E + T+ ++ +F A WCG CKS+AP Y
Sbjct: 8 NVKVLELDSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVY 49
Score = 32.3 bits (70), Expect = 0.28
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 285 KVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTG 437
K+D Q+LA GV PT +FF+N +D G + +KK G
Sbjct: 63 KIDVDVCQELAAKQGVTAMPTFQFFKNKVKVDEVRGADPKALEDAIKKWIG 113
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 34.7 bits (76), Expect = 0.052
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 148 ETVISTTEYILVEFYAPWCGHCKSLAP 228
+ VI+ + +L+ FY PWCG C + AP
Sbjct: 529 DIVINNDQDVLLVFYTPWCGMCINFAP 555
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 34.7 bits (76), Expect = 0.052
Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = +1
Query: 118 NVLVLSKANFETVI---STTEYILVEFYAPWCGHCKSLAPEY 234
NV+V+ +F +V + + ++++F A WCG CKS+AP +
Sbjct: 9 NVIVVEDDSFFSVEIERAGSRLVVIDFTATWCGPCKSIAPVF 50
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +3
Query: 285 KVDATQEQDLAESYGVRGYPTLKFFRNGSPID 380
KVD Q Q AES G+R PT F+ N + ID
Sbjct: 64 KVDVDQCQLTAESCGIRAMPTFHFYHNKAKID 95
>SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 31.9 bits (69), Expect = 0.37
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 324 YGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTG 437
+G+ +PTLK FR G P DY+G + + S++ + G
Sbjct: 251 FGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLG 289
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 31.5 bits (68), Expect = 0.49
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +1
Query: 145 FETVISTTEYILVEFYAPWCGHCKSLAPEY 234
F+ + E ++F A WCG C+ + P++
Sbjct: 4 FDKFLKDNEVAAIDFTATWCGPCRMIGPKF 33
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 31.1 bits (67), Expect = 0.64
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 255 AEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPID 380
AE++ + LAKVD +LA ++GV PT+ + G I+
Sbjct: 18 AEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVIN 59
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 31.1 bits (67), Expect = 0.64
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +3
Query: 255 AEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDY 383
AE++ + LAKVD +LA ++GV PT+ + G +++
Sbjct: 64 AEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVMEH 106
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 31.1 bits (67), Expect = 0.64
Identities = 8/36 (22%), Positives = 21/36 (58%)
Frame = +1
Query: 115 ENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSL 222
+ ++ + N + + ++++ + FYAPW HC+ +
Sbjct: 26 KKIVEFTNENVDEYVDGSKFVFIFFYAPWDDHCQRI 61
>SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 39
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 118 NVLVLSKANFETVISTTEYILVEFYA 195
NV++L + NF+ VI+ + + V FYA
Sbjct: 12 NVVILDEGNFDKVIAENKLVFVNFYA 37
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 29.5 bits (63), Expect = 2.0
Identities = 10/29 (34%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +1
Query: 142 NFETVISTTEYIL--VEFYAPWCGHCKSL 222
+F+ ++S++ +L V F+APW HC +
Sbjct: 11 DFDRILSSSSNVLAVVHFFAPWAPHCNQM 39
>SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 330 VRGYPTLKFFRNG-SPIDYSGGRQADDIISWL 422
+ GYPTL F++G +YSG R D + ++
Sbjct: 1 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 32
>SB_8819| Best HMM Match : I-set (HMM E-Value=0)
Length = 1789
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +3
Query: 276 KLAKVDATQEQDLAESYGVRGYP--TLKFFRNGSPI 377
KL V T+E D + V G P T+K+F++G P+
Sbjct: 1042 KLQPVQVTEEDDCKLTCKVSGLPEPTIKWFKDGEPV 1077
>SB_31331| Best HMM Match : Thioredoxin (HMM E-Value=1.2)
Length = 214
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +3
Query: 273 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSG 389
+ +A V+ +E +LA+ GV+ + F G ++Y G
Sbjct: 104 VTVAAVNVAEEYELAQKLGVKFSGAISVFHRGKRVEYYG 142
>SB_32410| Best HMM Match : DEP (HMM E-Value=2e-09)
Length = 144
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 198 MVRPLQVSGAGIRQGSHKAAEEESPIKL 281
+V +Q GAG+ GSH A EE KL
Sbjct: 11 IVNAMQDPGAGVTLGSHSCAREEKIYKL 38
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,169,420
Number of Sequences: 59808
Number of extensions: 299282
Number of successful extensions: 703
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1312894764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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