Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060390.seq
         (549 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domai...    30   0.044
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    29   0.13 
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    28   0.23 
DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domai...    27   0.41 
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    25   1.6  
CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein ...    25   2.2  
AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2 ...    24   3.8  
AY994093-1|AAX86006.1|   45|Anopheles gambiae metallothionein 1 ...    24   3.8  
AY330174-1|AAQ16280.1|  178|Anopheles gambiae odorant-binding pr...    24   3.8  
AJ618918-1|CAF01997.1|  228|Anopheles gambiae putative odorant-b...    24   3.8  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   3.8  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    23   5.0  
CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence re...    23   5.0  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   8.8  

>DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 168

 Score = 30.3 bits (65), Expect = 0.044
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 307 CKTGWIYEAKTDSCVPKCTS 366
           CK G++ E+K   C+PKC++
Sbjct: 72  CKPGFVRESKEGKCIPKCSN 91


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 28.7 bits (61), Expect = 0.13
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -1

Query: 207 RCLMTGTSTVATPFPSFMASQNNDRSPMTNNRTDK 103
           + L  G++ V +  PSF+   + + +P T NRT+K
Sbjct: 338 KALSDGSAAVGSTIPSFLNVIDTNEAPPTYNRTNK 372


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 27.9 bits (59), Expect = 0.23
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -1

Query: 201 LMTGTSTVATPFPSFMASQNNDRSPMTNNRTDK 103
           L+ G++ V +  PSF+     D  P T N+T+K
Sbjct: 332 LVNGSAAVGSAVPSFLNIIATDEDPPTYNKTNK 364


>DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 103

 Score = 27.1 bits (57), Expect = 0.41
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +1

Query: 436 GHCVEPTCSPACDSYSSCTDFNVCTA 513
           G CVEPTCS   +  + CT  NVC A
Sbjct: 48  GPCVEPTCSKP-EPDADCT--NVCVA 70


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +1

Query: 346 CVPKCTSGCVNGTCEAPEVC-TCPEPLVLRRGHCVE 450
           C+   TSG +  TCEA   C +C  P  +    CV+
Sbjct: 429 CIRCGTSGHLAATCEAEVRCASCAGPHRMGSAQCVQ 464


>CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein
           protein.
          Length = 227

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 307 CKTGWIYEAKTDSCVPKCTSG 369
           C+ G++Y    DSC P    G
Sbjct: 84  CRPGYVYSPPQDSCYPLFQQG 104


>AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2
           protein.
          Length = 41

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 11/30 (36%), Positives = 12/30 (40%)
 Frame = +1

Query: 355 KCTSGCVNGTCEAPEVCTCPEPLVLRRGHC 444
           KCTS      C     CTCP     + G C
Sbjct: 11  KCTSPNCGAGCGCESRCTCPCKDGAKEGCC 40



 Score = 22.6 bits (46), Expect = 8.8
 Identities = 7/17 (41%), Positives = 7/17 (41%)
 Frame = +1

Query: 442 CVEPTCSPACDSYSSCT 492
           C  P C   C   S CT
Sbjct: 12  CTSPNCGAGCGCESRCT 28


>AY994093-1|AAX86006.1|   45|Anopheles gambiae metallothionein 1
           protein.
          Length = 45

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 1/20 (5%)
 Frame = +1

Query: 355 KCTSGCVNG-TCEAPEVCTC 411
           KCTSGC +G  C     C C
Sbjct: 11  KCTSGCGSGQPCATDCKCAC 30


>AY330174-1|AAQ16280.1|  178|Anopheles gambiae odorant-binding
           protein AgamOBP47 protein.
          Length = 178

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 10/42 (23%), Positives = 15/42 (35%)
 Frame = +1

Query: 262 CVITESYVSIEKSQSCKTGWIYEAKTDSCVPKCTSGCVNGTC 387
           C +T   V      +C + WI + K    +     GC    C
Sbjct: 23  CCVTPFLVEPSAFMTCHSKWIGQTKRQMAMEGIPRGCCVAEC 64


>AJ618918-1|CAF01997.1|  228|Anopheles gambiae putative
           odorant-binding protein OBPjj2 protein.
          Length = 228

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 10/42 (23%), Positives = 15/42 (35%)
 Frame = +1

Query: 262 CVITESYVSIEKSQSCKTGWIYEAKTDSCVPKCTSGCVNGTC 387
           C +T   V      +C + WI + K    +     GC    C
Sbjct: 73  CCVTPFLVEPSAFMTCHSKWIGQTKRQMAMEGIPRGCCVAEC 114


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 151 CHKRWERSCHR 183
           C K+W R CHR
Sbjct: 786 CRKQWLRRCHR 796


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
 Frame = +1

Query: 307 CKTGWIYEAKTDSCVPKCTSGCVNGT-CEA--PEVCTCPEPLVLRR--GHCV 447
           CK G++ E +  +CVP  T+     T C A     C C +  V +   G C+
Sbjct: 60  CKKGFVRETQFGNCVPVDTTYNPTTTKCAAGFTSGCVCKKGFVRKTEFGKCI 111


>CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence
           receptor protein.
          Length = 284

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 223 VDQTSALPYDRYVHGGNSFPIFYGITKQ*SFA 128
           +   SA+PY+R V  G+   + Y      SFA
Sbjct: 126 IQNFSAVPYNREVKPGHEATVAYSFLPTESFA 157


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -2

Query: 437 PRLRTRGSGQVHTSGASQVPFTHPLVHFGTQLS 339
           P LRT   G+ H S      F H    +G +L+
Sbjct: 452 PLLRTLDLGENHISNIDNASFRHMAHLYGLRLT 484


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,824
Number of Sequences: 2352
Number of extensions: 13193
Number of successful extensions: 34
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)