Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060389.seq
(569 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0103 + 1082077-1082167,1083037-1085477 101 3e-22
02_04_0017 + 18937774-18937864,18938505-18940945 101 3e-22
01_06_0662 + 30987187-30987277,30987825-30990214 100 2e-21
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 99 2e-21
03_05_0511 + 25056018-25059107 53 2e-07
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 52 2e-07
02_04_0148 - 20198407-20201424 52 4e-07
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 50 2e-06
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 50 2e-06
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 50 2e-06
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 49 3e-06
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 47 1e-05
05_05_0156 + 22792783-22793410,22797153-22797227,22797644-227988... 46 3e-05
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 43 1e-04
02_04_0462 + 23131433-23132836 39 0.003
03_01_0548 + 4099386-4099847,4100435-4101316 33 0.12
03_01_0547 + 4093196-4093657,4094267-4095148 33 0.12
03_01_0544 + 4082528-4082989,4083585-4084466 33 0.12
03_01_0543 + 4076981-4077442,4078145-4079026 33 0.12
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 33 0.21
05_07_0212 + 28434612-28435931,28436012-28436044,28436557-284366... 32 0.37
08_02_0059 - 11778739-11780998,11781744-11781751 31 0.85
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 30 1.5
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 30 1.5
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 29 2.6
05_04_0199 + 18980017-18980759,18981478-18981532 29 2.6
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 28 6.0
03_05_0990 - 29503950-29504462,29504567-29504686,29514956-295150... 28 6.0
01_06_1466 + 37559600-37559795,37560597-37560730,37561252-375614... 28 6.0
01_01_0699 + 5405178-5405356,5405478-5405693,5405808-5405919,540... 28 6.0
09_04_0743 - 19862847-19864745,19865875-19866912 27 8.0
08_01_0345 + 3055522-3055827,3055968-3056022,3056744-3056919,305... 27 8.0
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 101 bits (243), Expect = 3e-22
Identities = 49/66 (74%), Positives = 55/66 (83%)
Frame = +3
Query: 57 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 236
MV FTV+E+R +MDKK NIRNMSVIAHVDHGKSTLTDSLV+ AGIIA AG+ R TDTR
Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 237 KDEQDR 254
DE +R
Sbjct: 61 ADEAER 66
Score = 90.6 bits (215), Expect = 8e-19
Identities = 49/84 (58%), Positives = 60/84 (71%)
Frame = +2
Query: 257 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 436
ITIKST IS+F+E+ ++ L +R+ +E +LINLIDSPGHVDFSSEVTAALR+TD
Sbjct: 68 ITIKSTGISLFYEMSDESLKLYKG--ERDGNE--YLINLIDSPGHVDFSSEVTAALRITD 123
Query: 437 GALXXXXXXXXXXXQTETVLRQAI 508
GAL QTETVLRQA+
Sbjct: 124 GALVVVDCIEGVCVQTETVLRQAL 147
Score = 34.3 bits (75), Expect = 0.069
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 460 CVWCVCTNRNSTA-SGYSERIKPILFMNKMDRALLEL 567
C+ VC + ERI+P+L +NKMDR LEL
Sbjct: 131 CIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLEL 167
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 101 bits (243), Expect = 3e-22
Identities = 49/66 (74%), Positives = 55/66 (83%)
Frame = +3
Query: 57 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 236
MV FTV+E+R +MDKK NIRNMSVIAHVDHGKSTLTDSLV+ AGIIA AG+ R TDTR
Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 237 KDEQDR 254
DE +R
Sbjct: 61 ADEAER 66
Score = 90.6 bits (215), Expect = 8e-19
Identities = 49/84 (58%), Positives = 60/84 (71%)
Frame = +2
Query: 257 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 436
ITIKST IS+F+E+ ++ L +R+ +E +LINLIDSPGHVDFSSEVTAALR+TD
Sbjct: 68 ITIKSTGISLFYEMSDESLKLYKG--ERDGNE--YLINLIDSPGHVDFSSEVTAALRITD 123
Query: 437 GALXXXXXXXXXXXQTETVLRQAI 508
GAL QTETVLRQA+
Sbjct: 124 GALVVVDCIEGVCVQTETVLRQAL 147
Score = 34.3 bits (75), Expect = 0.069
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 460 CVWCVCTNRNSTA-SGYSERIKPILFMNKMDRALLEL 567
C+ VC + ERI+P+L +NKMDR LEL
Sbjct: 131 CIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLEL 167
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 99.5 bits (237), Expect = 2e-21
Identities = 47/66 (71%), Positives = 55/66 (83%)
Frame = +3
Query: 57 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 236
MV FTV+E+R +MDKK NIRNMSV+AHVDHGKSTLTDSLV+ AGIIA AG+ R TD+R
Sbjct: 1 MVKFTVEEMRRIMDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDSR 60
Query: 237 KDEQDR 254
DE +R
Sbjct: 61 SDEAER 66
Score = 88.2 bits (209), Expect = 4e-18
Identities = 48/84 (57%), Positives = 60/84 (71%)
Frame = +2
Query: 257 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 436
ITIKST IS+++E+ ++ L + R+ +E +LINLIDSPGHVDFSSEVTAALR+TD
Sbjct: 68 ITIKSTGISLYYEMSDESLK--SYKGDRDGNE--YLINLIDSPGHVDFSSEVTAALRITD 123
Query: 437 GALXXXXXXXXXXXQTETVLRQAI 508
GAL QTETVLRQA+
Sbjct: 124 GALVVVDCIEGVCVQTETVLRQAL 147
Score = 34.3 bits (75), Expect = 0.069
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 460 CVWCVCTNRNSTA-SGYSERIKPILFMNKMDRALLEL 567
C+ VC + ERI+P+L +NKMDR LEL
Sbjct: 131 CIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLEL 167
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 99.1 bits (236), Expect = 2e-21
Identities = 48/66 (72%), Positives = 53/66 (80%)
Frame = +3
Query: 57 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 236
MV FT +E+R MDKK NIRNMSVIAHVDHGKSTLTDSLV+ AGIIA AG+ R TDTR
Sbjct: 1 MVRFTAEELRASMDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDTR 60
Query: 237 KDEQDR 254
DE +R
Sbjct: 61 ADEAER 66
Score = 84.6 bits (200), Expect = 5e-17
Identities = 44/84 (52%), Positives = 57/84 (67%)
Frame = +2
Query: 257 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 436
ITIKST IS+++E+ + L + ++ +LINLIDSPGH+DFSSEVTAALR+TD
Sbjct: 68 ITIKSTGISLYYEMTDAAL----RSFEGKRDGNSYLINLIDSPGHIDFSSEVTAALRITD 123
Query: 437 GALXXXXXXXXXXXQTETVLRQAI 508
GAL QTETVLRQ++
Sbjct: 124 GALVVVDCIEGVCVQTETVLRQSL 147
Score = 35.9 bits (79), Expect = 0.023
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 460 CVWCVCTNRNSTA-SGYSERIKPILFMNKMDRALLEL 567
C+ VC + +ERIKP+L +NKMDR LEL
Sbjct: 131 CIEGVCVQTETVLRQSLAERIKPVLTVNKMDRCFLEL 167
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/50 (50%), Positives = 31/50 (62%)
Frame = +2
Query: 356 GFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQA 505
G +NLIDSPGH+DF SEV++A R++D AL QT LRQA
Sbjct: 74 GHRVNLIDSPGHIDFCSEVSSAARLSDSALILVDAVEGVHIQTHAALRQA 123
Score = 51.2 bits (117), Expect = 6e-07
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Frame = +3
Query: 105 RNIRNMSVIAHVDHGKSTLTDSLVSKA--GIIAGARAGETRFTDTRKDEQDRA 257
R +RN ++AHVDHGK+TL D LV+ G++ AG RF D +EQ RA
Sbjct: 8 RRVRNTCILAHVDHGKTTLADHLVASCGDGLVHPRLAGRLRFMDYLDEEQRRA 60
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 505 YSERIKPILFMNKMDRALLEL 567
+ ER++P L +NK+DR + EL
Sbjct: 124 FLERLRPCLVLNKLDRLISEL 144
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 52.4 bits (120), Expect = 2e-07
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = +2
Query: 353 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQA 505
K +L N++D+PGHV+FS E+TAALR+ DGA+ TE +R A
Sbjct: 217 KSYLCNIMDTPGHVNFSDEMTAALRIADGAVLVVDAAEGVMVNTERAIRHA 267
Score = 45.2 bits (102), Expect = 4e-05
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +3
Query: 69 TVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKA-GIIAGARAGE--TRFTDTRK 239
T D + G+ +RN++++ H+ HGK+ D LV + + GE RFTDTR
Sbjct: 134 TTDFLLGLAANPALVRNVALVGHLQHGKTVFMDMLVEQTHEVDTFDSEGERHVRFTDTRV 193
Query: 240 DEQDRASPLNLRP 278
DEQ+R + P
Sbjct: 194 DEQERRVSIKAVP 206
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/50 (50%), Positives = 30/50 (60%)
Frame = +2
Query: 356 GFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQA 505
G ++LIDSPGH+DF SEV+AA R+ D AL QT LRQA
Sbjct: 86 GHRVHLIDSPGHIDFCSEVSAAARLADSALVLVDAAEGVRVQTHAALRQA 135
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Frame = +3
Query: 105 RNIRNMSVIAHVDHGKSTLTDSLVSKAGI---IAGARAGETRFTDTRKDEQDRA 257
R +RN ++AHVDHGK++L D L++ G ++ AG R D ++EQ RA
Sbjct: 14 RRVRNTCILAHVDHGKTSLADHLIAAYGSERRVSERMAGSARVMDHLEEEQRRA 67
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/49 (48%), Positives = 31/49 (63%)
Frame = +2
Query: 356 GFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQ 502
G+ +N+ID+PGHVDF+ EV ALRV DGA+ Q+ TV RQ
Sbjct: 135 GYQVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQ 183
Score = 31.5 bits (68), Expect = 0.49
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 78 EIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 194
E+ + +RN+ + AH+D GK+TLT+ ++ G I
Sbjct: 57 EVARWRESMDRMRNIGISAHIDSGKTTLTERVLYYTGRI 95
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 49.6 bits (113), Expect = 2e-06
Identities = 19/51 (37%), Positives = 36/51 (70%)
Frame = +3
Query: 102 KRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDR 254
+R++RN++++AHVDHGK+TL DS++ +A + + + R D+ E++R
Sbjct: 116 RRDVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVVQERIMDSNDLERER 166
Score = 44.0 bits (99), Expect = 9e-05
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +2
Query: 353 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAI 508
KG IN+ID+PGH DF EV L + +G L QT VL++A+
Sbjct: 180 KGTKINIIDTPGHSDFGGEVERVLNMVEGVLLVVDSVEGPMPQTRFVLKKAL 231
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/56 (42%), Positives = 34/56 (60%)
Frame = +3
Query: 108 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRASPLNLR 275
NIRN S+IAH+DHGKSTL D L+ G + R + +F D E++R + L+
Sbjct: 76 NIRNFSIIAHIDHGKSTLADKLLELTGTVQ-KREMKQQFLDNMDLERERGITIKLQ 130
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +2
Query: 347 SEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 445
+++ + +NLID+PGHVDFS EV+ +L +GAL
Sbjct: 139 NDEPYCLNLIDTPGHVDFSYEVSRSLAACEGAL 171
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 48.8 bits (111), Expect = 3e-06
Identities = 26/63 (41%), Positives = 35/63 (55%)
Frame = +2
Query: 257 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 436
IT+K+ +MF+ L PD +L+NLID+PGHVDFS EV+ +L
Sbjct: 105 ITVKAQTATMFYRHANNQLPASDQPDA-----PSYLLNLIDTPGHVDFSYEVSRSLAACQ 159
Query: 437 GAL 445
GAL
Sbjct: 160 GAL 162
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/48 (45%), Positives = 31/48 (64%)
Frame = +3
Query: 111 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDR 254
+RN S+IAHVDHGKSTL D L+ G I G+ ++ D + E++R
Sbjct: 57 VRNFSIIAHVDHGKSTLADRLLELTGTIKKGH-GQPQYLDKLQVERER 103
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/60 (43%), Positives = 36/60 (60%)
Frame = +2
Query: 266 KSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 445
+ T + E E++ + IT+P K IN+ID+PGHVDF+ EV ALRV DGA+
Sbjct: 139 EGTVTMDWMEQEQERGITITSPPTTAFWNK-HRINIIDTPGHVDFTLEVERALRVLDGAI 197
>05_05_0156 +
22792783-22793410,22797153-22797227,22797644-22798879,
22798947-22799155,22799240-22800209,22800395-22800465
Length = 1062
Score = 45.6 bits (103), Expect = 3e-05
Identities = 31/90 (34%), Positives = 49/90 (54%)
Frame = +2
Query: 239 GRTRPCITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTA 418
G T +T ++ IS+++E+ E L + D+R + G LINLIDSP + S++V
Sbjct: 248 GITSQEVTESNSLISLYYEMPEDSLR--SYKDKR--AGNGHLINLIDSPVCCNLSNDVQP 303
Query: 419 ALRVTDGALXXXXXXXXXXXQTETVLRQAI 508
AL + DGAL T+T +R+A+
Sbjct: 304 ALCIMDGALVVVDSFEGVTLWTKTSIREAL 333
Score = 44.4 bits (100), Expect = 6e-05
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +3
Query: 75 DEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGI 191
+E+ +M K NIRN+ VIA HGK+ + DSLV+ AGI
Sbjct: 211 EELHSIMCNKNNIRNVLVIADAGHGKTAILDSLVATAGI 249
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +3
Query: 87 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 188
G +D R IRN++VIAHVDHGK+TL D L+ + G
Sbjct: 57 GALDPSR-IRNVAVIAHVDHGKTTLMDRLLRQCG 89
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 365 INLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAI 508
+N++D+PGH DF EV + + +GA+ QT+ VL +A+
Sbjct: 125 LNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEGPLAQTKFVLSKAL 172
>02_04_0462 + 23131433-23132836
Length = 467
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 84 RGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRASP 263
RG ++ + N+ I HVDHGK+TLT +L + G+ + D +E+ R
Sbjct: 61 RGKFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDEIDAAPEERARGIT 120
Query: 264 LN 269
+N
Sbjct: 121 IN 122
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 93 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 188
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLG 32
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 93 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 188
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLG 32
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 93 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 188
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLG 32
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 93 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 188
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLG 32
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 32.7 bits (71), Expect = 0.21
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 117 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRASPLNL 272
N+ I HVDHGK+TLT + ++K AG +A F + K +++A + +
Sbjct: 69 NVGTIGHVDHGKTTLT-AAITKVLAEAG-KAKAVAFDEIDKAPEEKARGITI 118
>05_07_0212 +
28434612-28435931,28436012-28436044,28436557-28436670,
28436767-28437102,28437221-28437283,28437364-28437519,
28437650-28437715,28439074-28439310,28439403-28439678,
28440060-28440248,28440459-28440620
Length = 983
Score = 31.9 bits (69), Expect = 0.37
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +3
Query: 120 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR 221
++++ HVDHGK+TL D + K+ ++A G T+
Sbjct: 430 VTIMGHVDHGKTTLLD-YIRKSKVVASEAGGITQ 462
>08_02_0059 - 11778739-11780998,11781744-11781751
Length = 755
Score = 30.7 bits (66), Expect = 0.85
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = -2
Query: 229 SVKRVSPALAPAM-IPALETNESVRVDLP*STWAITDMLRIFRFLSIIPRISSTVK 65
S++R+ P++ + ++ +S+ +LP S W IT + +F I+PR + +K
Sbjct: 470 SLRRIHPSIGNLKNLQTIDVRQSLVHELPCSFWKITSLRHVFGSELIVPRWTRELK 525
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 117 NMSVIAHVDHGKSTLTDSLVSKAGIIA 197
N++++ HVD GKSTL+ L+ G I+
Sbjct: 249 NLAIVGHVDSGKSTLSGRLLHLLGRIS 275
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 117 NMSVIAHVDHGKSTLTDSLVSKAGIIA 197
N++++ HVD GKSTL+ L+ G I+
Sbjct: 249 NLAIVGHVDSGKSTLSGRLLHLLGRIS 275
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 29.1 bits (62), Expect = 2.6
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +3
Query: 120 MSVIAHVDHGKSTLTDSL 173
++++ HVDHGK++L DSL
Sbjct: 200 VTIMGHVDHGKTSLLDSL 217
>05_04_0199 + 18980017-18980759,18981478-18981532
Length = 265
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +2
Query: 83 PWDDGQEAEYPQHVCDRPRRSRQVNPHGLVGFQGRYHCWC 202
PW GQ P + C R R P+G R C C
Sbjct: 190 PWKGGQGGNNPDYECLRAELRRMAPPNGRAVLLFRNRCGC 229
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 353 KGFLINLIDSPGHVDFSSEVTAALRVTDGAL 445
K + + L+DSPGH DF + + +D A+
Sbjct: 310 KNYHVVLLDSPGHKDFVPNMISGATQSDAAI 340
>03_05_0990 -
29503950-29504462,29504567-29504686,29514956-29515012,
29515635-29515689,29515765-29515845,29515928-29515983,
29516112-29516256,29516347-29516415,29517355-29517467,
29517619-29517708,29518112-29518176,29519256-29519667
Length = 591
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 136 TSITASQP--SRTRWFPRPVSLLVREPERPVSLTRVR 240
+S TAS P S PR +SLL R+PERP L V+
Sbjct: 44 SSPTASPPADSDDEGSPRGLSLLPRDPERPPRLLVVQ 80
>01_06_1466 +
37559600-37559795,37560597-37560730,37561252-37561437,
37562538-37562753,37563008-37563119,37563493-37563663,
37564621-37564684,37565555-37565685,37566263-37566393,
37566843-37566945,37567322-37567398,37567813-37567860,
37568162-37568311,37568810-37569010
Length = 639
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -1
Query: 182 LGNQRVREG*LAVIDVGDHRHV-ADIPLLVHHPTDLVYREIHHFRWF 45
+GN+ +G A +D HRH+ A++PL PTD+ ++ F+WF
Sbjct: 585 IGNE---DGVAAAVD-SFHRHLPAELPL-APPPTDVKEEQLDFFQWF 626
>01_01_0699 +
5405178-5405356,5405478-5405693,5405808-5405919,
5406335-5406397,5406468-5406606,5406822-5406877,
5408088-5408161,5408270-5408417,5408505-5408678,
5408809-5408896,5408996-5409109,5409728-5409825,
5409927-5410017,5410440-5410534,5410672-5410825,
5410864-5410876,5411276-5411384
Length = 640
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +1
Query: 130 SPTSITASQPSRTRWFPRPVSLLVREPERPVSLTR 234
SP A+ P R W PRP S P P+SL R
Sbjct: 18 SPLPFAAAHPCRASWTPRPTS-----PLPPLSLLR 47
>09_04_0743 - 19862847-19864745,19865875-19866912
Length = 978
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 156 LTCRDRRGRSQTCCGYSASCPSSHGS 79
+ CR RRG S+ CC S+SC + H S
Sbjct: 691 VVCRCRRGFSE-CCESSSSCFAGHFS 715
>08_01_0345 +
3055522-3055827,3055968-3056022,3056744-3056919,
3057104-3057232,3057313-3057572,3057688-3058001,
3058268-3058491,3058862-3059214,3059489-3059916,
3060031-3061514
Length = 1242
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 150 KSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRASPLNLRPS 281
KS S+ S + + E RFTD ++EQD S + PS
Sbjct: 583 KSPFYSSVCSMQNLEKESGKSEERFTDQVREEQDNGSGTSNEPS 626
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,464,159
Number of Sequences: 37544
Number of extensions: 311271
Number of successful extensions: 997
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1317005676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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