Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060389.seq
         (569 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    29   0.11 
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            26   0.99 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   1.3  
AF515471-1|AAM61879.1|  225|Anopheles gambiae glutathione S-tran...    24   4.0  
AF491816-1|AAM09542.2|  225|Anopheles gambiae glutathione S-tran...    24   4.0  
AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...    24   4.0  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   5.3  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           23   5.3  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   7.0  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    23   7.0  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    23   7.0  
AF316636-1|AAG45164.1|  221|Anopheles gambiae glutathione S-tran...    23   7.0  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   9.3  
AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    23   9.3  

>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 29.1 bits (62), Expect = 0.11
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +2

Query: 92  DGQEAEYPQHVCDRPRRSRQVNPHGLVGFQGRYHCWCESRR 214
           D   A   QH+  RP+RS + NP       GR H  C+SRR
Sbjct: 273 DENPAGAQQHLSHRPQRSTRKNP------AGRQHDRCDSRR 307


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.8 bits (54), Expect = 0.99
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -3

Query: 378 SIKLIKKPFSLFSRWSGFVMNTKSFSSSSKNIEMAVDL 265
           +++L+KKP SL S W       +       N ++A+ L
Sbjct: 156 TVRLLKKPPSLDSEWKSSTSTIQLIEQLDSNKQLAIAL 193


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +3

Query: 171 LVSKAGIIAGARAGETRFTDTRKDEQDRASPLNLRPSL 284
           +V + G++ G    ET     RK+  +R+ PL  R  L
Sbjct: 804 MVLQEGVVEGGTKDETDMERERKEMVERSRPLRKRKRL 841


>AF515471-1|AAM61879.1|  225|Anopheles gambiae glutathione
           S-transferase 3-8 protein.
          Length = 225

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +2

Query: 242 RTRPCITIKSTAISMFFELEEKDLVFI 322
           ++ PC  +K TA ++  EL EK++  +
Sbjct: 13  KSPPCRAVKLTARALGIELVEKEMTLL 39


>AF491816-1|AAM09542.2|  225|Anopheles gambiae glutathione
           S-transferase E7 protein.
          Length = 225

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +2

Query: 242 RTRPCITIKSTAISMFFELEEKDLVFI 322
           ++ PC  +K TA ++  EL EK++  +
Sbjct: 13  KSPPCRAVKLTARALGIELVEKEMTLL 39


>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 486 SVCTHTPDTQSTTTRAPS 433
           SV  H PDT+ T  + PS
Sbjct: 135 SVIAHNPDTKRTRVKLPS 152


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 107 EYPQHVCDRPRRSRQVNPHGLVGFQG 184
           ++P HVC+R  R+  +N   +V   G
Sbjct: 350 QHPLHVCERFERASVINREEIVRKHG 375


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -3

Query: 495 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKST-CPGES 376
           +TV+  T T    +TTT AP+ T + A      +T  PG++
Sbjct: 34  TTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVAPGQT 74


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -3

Query: 480 CTHTPDTQSTTTRAPSVTRSAAVTS 406
           CT++ D+ +TTT   S + S+  T+
Sbjct: 471 CTYSSDSTTTTTTTKSASTSSHSTT 495


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 462 CLVCVYKPKQYCVRLFRA 515
           C+VC +   Q CVRL +A
Sbjct: 354 CVVCDFTCHQQCVRLEKA 371


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
 Frame = +1

Query: 460 CVWCVCTNRNSTASGYSER-----IKPILFM 537
           C WC CT  +  A  Y+++     ++P+ F+
Sbjct: 366 CRWCECTLGDLIADAYADQYTNSTVQPVAFV 396


>AF316636-1|AAG45164.1|  221|Anopheles gambiae glutathione
           S-transferase E2 protein.
          Length = 221

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 251 PCITIKSTAISMFFELEEKDLVFIT 325
           PC  ++ TA ++  ELE+K +  +T
Sbjct: 14  PCRAVELTAKALGLELEQKTINLLT 38


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 465  LVCVYKPKQYCVRLFRAHQAYSVHEQNGPCSS 560
            + C YKPKQ+ +R   A++  + H+  G  S+
Sbjct: 1609 MACNYKPKQHSMRSDEANK--NGHDSAGVLST 1638


>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = +2

Query: 80  DPWDDGQEAEYPQHVCDRPRRSRQVNP 160
           D WDD  + E+   + D P    +  P
Sbjct: 248 DDWDDEMDGEWEPPMIDNPEYKGEWKP 274


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,508
Number of Sequences: 2352
Number of extensions: 11863
Number of successful extensions: 30
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)