Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060389.seq
(569 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 99 2e-21
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 56 2e-08
At5g13650.2 68418.m01585 elongation factor family protein contai... 55 4e-08
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 54 7e-08
At5g13650.1 68418.m01584 elongation factor family protein contai... 53 2e-07
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 52 2e-07
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 52 2e-07
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 50 1e-06
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 50 1e-06
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 49 3e-06
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 49 3e-06
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 48 4e-06
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 46 2e-05
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 32 0.23
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 32 0.23
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 32 0.23
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 32 0.23
At1g19390.1 68414.m02412 wall-associated kinase, putative simila... 31 0.54
At3g20280.2 68416.m02570 PHD finger family protein contains Pfam... 31 0.72
At3g20280.1 68416.m02569 PHD finger family protein contains Pfam... 31 0.72
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 30 0.95
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 30 0.95
At5g17810.1 68418.m02088 homeobox-leucine zipper transcription f... 30 1.2
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 30 1.2
At3g03660.1 68416.m00369 homeobox-leucine zipper transcription f... 29 2.2
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 29 2.9
At4g05632.1 68417.m00875 hypothetical protein 27 6.7
At3g28790.1 68416.m03593 expressed protein 27 6.7
At1g12080.2 68414.m01397 expressed protein 27 6.7
At1g12080.1 68414.m01396 expressed protein 27 6.7
At1g04220.1 68414.m00412 beta-ketoacyl-CoA synthase, putative St... 27 6.7
At5g23160.1 68418.m02708 expressed protein ; expression supporte... 27 8.8
At3g06620.1 68416.m00769 protein kinase family protein contains ... 27 8.8
At2g03260.1 68415.m00279 EXS family protein / ERD1/XPR1/SYG1 fam... 27 8.8
At1g33970.1 68414.m04212 avirulence-responsive protein, putative... 27 8.8
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 27 8.8
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 99.1 bits (236), Expect = 2e-21
Identities = 48/66 (72%), Positives = 53/66 (80%)
Frame = +3
Query: 57 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 236
MV FT DE+R +MD K NIRNMSVIAHVDHGKSTLTDSLV+ AGIIA AG+ R TDTR
Sbjct: 1 MVKFTADELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 237 KDEQDR 254
DE +R
Sbjct: 61 ADEAER 66
Score = 89.8 bits (213), Expect = 1e-18
Identities = 49/84 (58%), Positives = 60/84 (71%)
Frame = +2
Query: 257 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 436
ITIKST IS+++E+ ++ L T R+ +E +LINLIDSPGHVDFSSEVTAALR+TD
Sbjct: 68 ITIKSTGISLYYEMTDESLKSFTGA--RDGNE--YLINLIDSPGHVDFSSEVTAALRITD 123
Query: 437 GALXXXXXXXXXXXQTETVLRQAI 508
GAL QTETVLRQA+
Sbjct: 124 GALVVVDCIEGVCVQTETVLRQAL 147
Score = 34.3 bits (75), Expect = 0.058
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 460 CVWCVCTNRNSTA-SGYSERIKPILFMNKMDRALLEL 567
C+ VC + ERI+P+L +NKMDR LEL
Sbjct: 131 CIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLEL 167
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 56.0 bits (129), Expect = 2e-08
Identities = 27/51 (52%), Positives = 33/51 (64%)
Frame = +2
Query: 353 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQA 505
K + +NLIDSPGH+DF SEV+ A R++DGAL QT VLRQA
Sbjct: 72 KDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLRQA 122
Score = 52.8 bits (121), Expect = 2e-07
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Frame = +3
Query: 105 RNIRNMSVIAHVDHGKSTLTDSLV--SKAGIIAGARAGETRFTDTRKDEQDRASPLNLRP 278
R +RN+ ++AHVDHGK+TL D L+ S G++ AG+ RF D +EQ RA + ++
Sbjct: 7 RKVRNICILAHVDHGKTTLADHLIASSGGGVLHPRLAGKLRFMDYLDEEQRRA--ITMKS 64
Query: 279 SLCSSSLKRK 308
S S SLK K
Sbjct: 65 S--SISLKYK 72
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 54.8 bits (126), Expect = 4e-08
Identities = 23/69 (33%), Positives = 44/69 (63%)
Frame = +3
Query: 48 PSKMVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFT 227
PS +V+ + +D++ N+RN++++AHVDHGK+TL DS++ +A + + + R
Sbjct: 62 PSTAEPASVEVKKKQLDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIM 121
Query: 228 DTRKDEQDR 254
D+ E++R
Sbjct: 122 DSNDLERER 130
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +2
Query: 353 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAI 508
K +N+ID+PGH DF EV L + DG L QT VL++A+
Sbjct: 144 KNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKAL 195
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 54.0 bits (124), Expect = 7e-08
Identities = 33/80 (41%), Positives = 45/80 (56%)
Frame = +2
Query: 266 KSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 445
+ TA + E E++ + IT+ +K IN+ID+PGHVDF+ EV ALRV DGA+
Sbjct: 131 EGTATMDWMEQEQERGITITSAATTTFWDK-HRINIIDTPGHVDFTLEVERALRVLDGAI 189
Query: 446 XXXXXXXXXXXQTETVLRQA 505
Q+ETV RQA
Sbjct: 190 CLFDSVAGVEPQSETVWRQA 209
Score = 30.3 bits (65), Expect = 0.95
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +3
Query: 105 RNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGE----TRFTDTRKDEQDR 254
++ RN+ ++AH+D GK+T T+ ++ G + GE T D + EQ+R
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG--RNYKIGEVHEGTATMDWMEQEQER 145
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 52.8 bits (121), Expect = 2e-07
Identities = 20/54 (37%), Positives = 38/54 (70%)
Frame = +3
Query: 93 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDR 254
+D++ N+RN++++AHVDHGK+TL DS++ +A + + + R D+ E++R
Sbjct: 76 LDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIMDSNDLERER 129
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +2
Query: 353 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAI 508
K +N+ID+PGH DF EV L + DG L QT VL++A+
Sbjct: 143 KNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKAL 194
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 52.4 bits (120), Expect = 2e-07
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +2
Query: 341 EKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAI 508
+ K +L N++D+PGHV+FS E+TA+LR+ DGA+ TE +R AI
Sbjct: 203 DSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEGVMVNTERAIRHAI 258
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +3
Query: 87 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARA---GETRFTDTRKDEQDR 254
G+M +RN++++ H+ HGK+ D LV + ++ A ++TDTR DEQ+R
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQER 188
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 52.4 bits (120), Expect = 2e-07
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +2
Query: 341 EKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAI 508
+ K +L N++D+PGHV+FS E+TA+LR+ DGA+ TE +R AI
Sbjct: 203 DSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEGVMVNTERAIRHAI 258
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +3
Query: 87 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARA---GETRFTDTRKDEQDR 254
G+M +RN++++ H+ HGK+ D LV + ++ A ++TDTR DEQ+R
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQER 188
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +2
Query: 341 EKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAI 508
+ K +L N++D+PG+V+FS E+TA+LR+ DGA+ TE +R AI
Sbjct: 189 DSRSKSYLCNIMDTPGNVNFSDEMTASLRLADGAVFIVDAAQGVMVNTERAIRHAI 244
Score = 44.0 bits (99), Expect = 7e-05
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +3
Query: 87 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARA---GETRFTDTRKDEQDR 254
G+M +RN++++ H+ HGK+ D LV + ++ A R+TDTR DEQ+R
Sbjct: 116 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHRMSTFNAENDKHMRYTDTRVDEQER 174
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 49.6 bits (113), Expect = 1e-06
Identities = 24/56 (42%), Positives = 34/56 (60%)
Frame = +3
Query: 108 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRASPLNLR 275
NIRN S+IAH+DHGKSTL D L+ G + R + +F D E++R + L+
Sbjct: 85 NIRNFSIIAHIDHGKSTLADKLLQVTGTVQN-RDMKEQFLDNMDLERERGITIKLQ 139
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +2
Query: 359 FLINLIDSPGHVDFSSEVTAALRVTDGAL 445
F +NLID+PGHVDFS EV+ +L +GAL
Sbjct: 152 FCLNLIDTPGHVDFSYEVSRSLAACEGAL 180
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = +2
Query: 353 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQ 502
K + +N+ID+PGHVDF+ EV ALRV DGA+ Q+ TV RQ
Sbjct: 131 KDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQ 180
Score = 31.5 bits (68), Expect = 0.41
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 93 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 194
MDK +RN+ + AH+D GK+TLT+ ++ G I
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = +2
Query: 353 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQ 502
K + +N+ID+PGHVDF+ EV ALRV DGA+ Q+ TV RQ
Sbjct: 131 KDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQ 180
Score = 31.5 bits (68), Expect = 0.41
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 93 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 194
MDK +RN+ + AH+D GK+TLT+ ++ G I
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVLFYTGRI 92
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 48.0 bits (109), Expect = 4e-06
Identities = 26/63 (41%), Positives = 38/63 (60%)
Frame = +2
Query: 257 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 436
IT+K+ +MF+E + +D + G+L+NLID+PGHVDFS EV+ +L
Sbjct: 112 ITVKAQTATMFYENKVED-----------QEASGYLLNLIDTPGHVDFSYEVSRSLSACQ 160
Query: 437 GAL 445
GAL
Sbjct: 161 GAL 163
Score = 44.4 bits (100), Expect = 5e-05
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +3
Query: 111 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQ 248
IRN S+IAH+DHGKSTL D L+ G I G+ ++ D + E+
Sbjct: 66 IRNFSIIAHIDHGKSTLADRLMELTGTIKKGH-GQPQYLDKLQRER 110
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/69 (34%), Positives = 36/69 (52%)
Frame = +3
Query: 63 NFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKD 242
+FTV RG ++K+ N+ I HVDHGK+TLT +L I + A + D +
Sbjct: 63 SFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDEIDAAPE 122
Query: 243 EQDRASPLN 269
E+ R +N
Sbjct: 123 ERARGITIN 131
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 32.3 bits (70), Expect = 0.23
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 93 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 188
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 32.3 bits (70), Expect = 0.23
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 93 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 188
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 32.3 bits (70), Expect = 0.23
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 93 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 188
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 32.3 bits (70), Expect = 0.23
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 93 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 188
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
>At1g19390.1 68414.m02412 wall-associated kinase, putative similar
to GB:CAB42872 from [Arabidopsis thaliana] (Plant Mol.
Biol. 39 (6), 1189-1196 (1999))
Length = 788
Score = 31.1 bits (67), Expect = 0.54
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 239 GRTRPCITIKSTAISMFFELEEKDLVFITNPDQREKSEKGF-LINLIDS 382
G+ RPC+ T + +E LV I N D + E+G +IN+ DS
Sbjct: 709 GKKRPCMRKVFTDLEKILASQEDSLVNIENDDGADDEEEGMTMINIDDS 757
>At3g20280.2 68416.m02570 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 482
Score = 30.7 bits (66), Expect = 0.72
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -3
Query: 492 TVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKS 394
T S T PD ST T APSVT+ + + EK+
Sbjct: 383 TASPATVVPDQDSTITAAPSVTQEDSAFNTEKT 415
>At3g20280.1 68416.m02569 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 743
Score = 30.7 bits (66), Expect = 0.72
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -3
Query: 492 TVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKS 394
T S T PD ST T APSVT+ + + EK+
Sbjct: 644 TASPATVVPDQDSTITAAPSVTQEDSAFNTEKT 676
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 30.3 bits (65), Expect = 0.95
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 117 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDR 254
N+ I HVDHGK+TLT ++ A+A D +E+ R
Sbjct: 69 NVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKR 114
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 30.3 bits (65), Expect = 0.95
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 120 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR 221
++++ HVDHGK+TL D + K+ + A G T+
Sbjct: 504 ITIMGHVDHGKTTLLD-YIRKSKVAASEAGGITQ 536
>At5g17810.1 68418.m02088 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana};
Length = 268
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 130 SPTSITASQPSRTRWFPRPVSLLVRE 207
SP+S T+++P R RW P+P +L+ E
Sbjct: 9 SPSS-TSTEPVRARWSPKPEQILILE 33
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 117 NMSVIAHVDHGKSTLTDSLVSKAGIIA 197
N++++ HVD GKSTL+ L+ G I+
Sbjct: 241 NLAIVGHVDSGKSTLSGRLLHLLGRIS 267
>At3g03660.1 68416.m00369 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana}
Length = 199
Score = 29.1 bits (62), Expect = 2.2
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 130 SPTSITASQPSRTRWFPRPVSLLVRE 207
S + T+++P R+RW P+P +L+ E
Sbjct: 20 SASGSTSAEPVRSRWSPKPEQILILE 45
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +3
Query: 120 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAG 212
++V+ HVDHGK++L D+L + + +A AG
Sbjct: 222 VTVMGHVDHGKTSLLDALRNTS--VAAREAG 250
>At4g05632.1 68417.m00875 hypothetical protein
Length = 197
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 220 VSLTRVRTNKTVHHH*IYGHLYVLR-A*RERFSIHHK 327
VSL+R + + HH +Y HL LR + E SIH +
Sbjct: 62 VSLSRTKQGSALEHHKLYMHLTKLRQSVLEASSIHDR 98
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 27.5 bits (58), Expect = 6.7
Identities = 25/68 (36%), Positives = 32/68 (47%)
Frame = -3
Query: 495 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVMN 316
ST + T TP T + +T APS T +A TSE+ S + K S S SG V
Sbjct: 294 STPTPSTPTPSTPTPSTPAPS-TPAAGKTSEKGSESASMKKESNSKSES-ESAASGSVSK 351
Query: 315 TKSFSSSS 292
TK + S
Sbjct: 352 TKETNKGS 359
>At1g12080.2 68414.m01397 expressed protein
Length = 138
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 483 VCTHTPDTQSTTTRAPSVTRSAAVTSEEKST 391
V T TP + +A VT + AV EEK T
Sbjct: 85 VITETPVVEEEEKKAEEVTETPAVVEEEKKT 115
>At1g12080.1 68414.m01396 expressed protein
Length = 104
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 483 VCTHTPDTQSTTTRAPSVTRSAAVTSEEKST 391
V T TP + +A VT + AV EEK T
Sbjct: 51 VITETPVVEEEEKKAEEVTETPAVVEEEKKT 81
>At1g04220.1 68414.m00412 beta-ketoacyl-CoA synthase, putative
Strong similarity to beta-keto-Coa synthase gb|U37088
from Simmondsia chinensis, GI:4091810
Length = 528
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 463 HTVNNHKGSISDTECSCYFRREIN 392
HTV HKGS D +C ++RE N
Sbjct: 315 HTVRTHKGS-DDNAFNCVYQREDN 337
>At5g23160.1 68418.m02708 expressed protein ; expression supported
by MPSS
Length = 271
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +1
Query: 160 SRTRWFPRPVSLLVREPERPVSLTRVRTNK 249
+RTRWF RP +E P S+ + K
Sbjct: 49 TRTRWFSRPTKFRSKEEITPTSIYKSEKQK 78
>At3g06620.1 68416.m00769 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 773
Score = 27.1 bits (57), Expect = 8.8
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -3
Query: 567 ELKKSTVHFVHEQNRLDALGIA*RSTVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTC 388
EL++S H E +RL + + SV H P ++ APS +S A + S
Sbjct: 15 ELEESQEHLKQEMSRLKVSTELRQRSHSVSPHRPARRNIGEGAPSWRKSGAASFRNASPL 74
Query: 387 PGES 376
ES
Sbjct: 75 RKES 78
>At2g03260.1 68415.m00279 EXS family protein / ERD1/XPR1/SYG1 family
protein similar to PHO1 protein [Arabidopsis thaliana]
GI:20069032; contains Pfam profiles PF03105: SPX domain,
PF03124: EXS family
Length = 807
Score = 27.1 bits (57), Expect = 8.8
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Frame = +3
Query: 141 DHG--KSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRASPLNLRPSLCSSSLKRKI* 314
DHG + D S + GAR D K +A+P + + +SS + +I
Sbjct: 230 DHGSVRGATGDVKTSSLNTMRGARPAPIEVLDHIKINNTKATPRSTIKGVLNSSSQNEII 289
Query: 315 YSSQTLTSVKRVRK 356
++ Q L V+ K
Sbjct: 290 FNRQNLNEVEEKLK 303
>At1g33970.1 68414.m04212 avirulence-responsive protein, putative /
avirulence induced gene protein, putative / AIG protein,
putative similar to SP|P54120 AIG1 protein {Arabidopsis
thaliana}; contains Pfam profile PF04548: AIG1 family
Length = 342
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 323 TNPDQREKSEKGFLINLIDSPGHVDFSS 406
T QR E G +IN++D+PG D S+
Sbjct: 62 TCESQRVVQEDGDIINVVDTPGLFDLST 89
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 96 DKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 188
+KKR++ N+ I HVD GKST+ ++ +G
Sbjct: 97 NKKRHL-NVVFIGHVDAGKSTIGGQILFLSG 126
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,526,589
Number of Sequences: 28952
Number of extensions: 252628
Number of successful extensions: 822
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1102220672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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