Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060388.seq
         (557 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    40   7e-05
EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.           26   0.73 
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    26   0.96 
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   6.8  
AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione S-tran...    23   9.0  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 39.5 bits (88), Expect = 7e-05
 Identities = 18/55 (32%), Positives = 31/55 (56%)
 Frame = +2

Query: 284 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQXWPIAMSGKNLV 448
           +V VSG    + ++ FE +   + V   V+   Y +PTPIQ    PI ++G++L+
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLM 215



 Score = 29.1 bits (62), Expect = 0.10
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +1

Query: 457 QTGSGKTLAYILPAIVH 507
           QTGSGKT A++LP I H
Sbjct: 219 QTGSGKTAAFMLPMIHH 235


>EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.
          Length = 452

 Score = 26.2 bits (55), Expect = 0.73
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +1

Query: 118 TVVPNLEEATNSAIIRLDLATVAVDLEDLEDLVGKKNSLE 237
           T++ +L+E   S +  LDL    +D  +L +L    +SLE
Sbjct: 140 TMLRDLDEGCRSRVQYLDLKLNEIDTVNLAELAASSDSLE 179


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 25.8 bits (54), Expect = 0.96
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
 Frame = +2

Query: 239 SQKITNEVEEYRNNHEVTVSGVEVH---NPIQYFEEANFPDYVQQGVKTMGYKE 391
           SQ  T E+E Y      TVS V ++    PI+  EEA  P +   G +T   KE
Sbjct: 153 SQNCTVEIESYG----YTVSDVVMYWRSTPIRGVEEAELPQFTIIGYETNDRKE 202


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 12/51 (23%), Positives = 23/51 (45%)
 Frame = +2

Query: 245 KITNEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 397
           ++ N  E        T S VE    + ++EE ++ ++  +   T+G K  T
Sbjct: 251 RVCNYTEAQMAPGLTTASPVEPEEGVDFYEELSYDNHPCKRACTLGRKPET 301


>AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione
           S-transferase e8 protein.
          Length = 217

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = +2

Query: 446 VGVLKRVPAKRWPTSCQPLCTKQPTAY 526
           V +   +PA RWP  C+     +   Y
Sbjct: 169 VAIFVPLPADRWPRVCEWFAVMEALPY 195


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,583
Number of Sequences: 2352
Number of extensions: 9812
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)