Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060387.seq
         (656 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    27   0.69 
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   1.6  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   2.1  
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    25   2.8  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   2.8  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    25   2.8  
X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein...    23   8.5  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    23   8.5  

>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 26.6 bits (56), Expect = 0.69
 Identities = 13/58 (22%), Positives = 24/58 (41%)
 Frame = +2

Query: 455 KGLTVMMMNQLPRKKLLQIAGCRPFXSVTWDIAHTHGASATRNVSWTFSNESHDASIH 628
           +GL +  +     +  ++ A CR   S    + H H     R   W F++ +  + IH
Sbjct: 239 EGLFLPELYSYDEQSCIECAECRGLFSPQKFVCHQHEPQEIRTCHWGFNSSNWRSYIH 296


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 603 LLNVQDTFLVALAPWVWAISQVTLXKGLHPAIWSSFFL 490
           L+N +D     LAP +  I  ++L  G+ PA+W S +L
Sbjct: 498 LINCKDV----LAPHLAKIFNLSLSLGVFPALWKSCWL 531


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
            transcription factor FRU-MA protein.
          Length = 960

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 9/37 (24%), Positives = 17/37 (45%)
 Frame = +1

Query: 247  EAFKCHICHKKLYTGPGLSIHCMQVHKEAIDKVPNSL 357
            ++ +C +C +K      +  HC   H E  D+  N +
Sbjct: 921  QSHECPVCGQKFTRRDNMKAHCKVKHPELRDRFYNHI 957


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 235 TSESEAFKCHICHKKLYTGPGLSIHCMQVHK 327
           TSE + F+C++C     T      H  +VH+
Sbjct: 343 TSEGQRFQCNLCDMSYRTKLQYQKHEYEVHR 373



 Score = 24.6 bits (51), Expect = 2.8
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +1

Query: 235 TSESEAFKCHICHKKLYTGPGLSIHCMQVH 324
           ++E+   KC ICHK         +H   +H
Sbjct: 375 SNENFGIKCTICHKLFSQRQDYQLHMRAIH 404


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 583 IPGGTGPMGVGNIPGXTVEGPAPS 512
           +PG  GP G   IPG   E   P+
Sbjct: 194 LPGNPGPRGYAGIPGTKGEKGEPA 217


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = -3

Query: 564 PWVWAISQVTLXKGLHPAIWSSFFLGSWFIIITVRPFAS 448
           P  W  S+ T      P     FF  SW+ II V P +S
Sbjct: 285 PTSWPRSRPTSKPKRLPRRRRPFFFSSWWCIILVLPCSS 323


>X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein
           Agm2 protein.
          Length = 599

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 197 NTSTKVWMPSSSSYP 153
           N S K W+P ++ YP
Sbjct: 439 NASVKPWLPLATDYP 453


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 606 SLLNVQDTFLVALAPWVWAISQVTLXKGLHPAI 508
           SL+ V   F + L PW+W+I   ++   + PA+
Sbjct: 275 SLIAVCARFFLQL-PWMWSILLGSIVGAVSPAV 306


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,741
Number of Sequences: 2352
Number of extensions: 12152
Number of successful extensions: 48
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)