Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060386.seq
         (679 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001487-1|AAN71242.1|  444|Drosophila melanogaster LD23846p pro...    98   1e-20
AE014297-3180|AAF56017.3|  362|Drosophila melanogaster CG5315-PB...    98   1e-20
AE014297-3179|AAN13909.1|  444|Drosophila melanogaster CG5315-PC...    98   1e-20
AE014297-3178|AAF56016.2|  444|Drosophila melanogaster CG5315-PA...    98   1e-20
AY094970-1|AAM11323.1| 1118|Drosophila melanogaster SD09067p pro...    29   5.8  
AE014297-4509|AAN14206.1|  104|Drosophila melanogaster CG7920-PB...    29   5.8  
AE014297-4114|AAF56695.2| 1120|Drosophila melanogaster CG3368-PA...    29   5.8  

>BT001487-1|AAN71242.1|  444|Drosophila melanogaster LD23846p
           protein.
          Length = 444

 Score = 97.9 bits (233), Expect = 1e-20
 Identities = 40/48 (83%), Positives = 46/48 (95%)
 Frame = +1

Query: 508 LLSDEIDLGALAHNAXEQAEEFVRKVWEASWNVCHFRHLPRWLQDNDY 651
           +LSDEIDLGALAHNA EQAEEFVRKVWEASW VCH+++LP+WLQDND+
Sbjct: 131 VLSDEIDLGALAHNAAEQAEEFVRKVWEASWKVCHYKNLPKWLQDNDF 178



 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
 Frame = +2

Query: 344 LRRRQGWDPDAESLASQ----MXXXXXXXXXXXXGCPLPSTPEDQHLLDAEMAEVLKAG 508
           LR+R+GW P+ +SL+      +            GCPLPSTPED  L++AEM EVLKAG
Sbjct: 73  LRKRRGWGPE-DSLSPNDLDILEYDDELVEEDDAGCPLPSTPEDTQLIEAEMTEVLKAG 130


>AE014297-3180|AAF56017.3|  362|Drosophila melanogaster CG5315-PB,
           isoform B protein.
          Length = 362

 Score = 97.9 bits (233), Expect = 1e-20
 Identities = 40/48 (83%), Positives = 46/48 (95%)
 Frame = +1

Query: 508 LLSDEIDLGALAHNAXEQAEEFVRKVWEASWNVCHFRHLPRWLQDNDY 651
           +LSDEIDLGALAHNA EQAEEFVRKVWEASW VCH+++LP+WLQDND+
Sbjct: 49  VLSDEIDLGALAHNAAEQAEEFVRKVWEASWKVCHYKNLPKWLQDNDF 96


>AE014297-3179|AAN13909.1|  444|Drosophila melanogaster CG5315-PC,
           isoform C protein.
          Length = 444

 Score = 97.9 bits (233), Expect = 1e-20
 Identities = 40/48 (83%), Positives = 46/48 (95%)
 Frame = +1

Query: 508 LLSDEIDLGALAHNAXEQAEEFVRKVWEASWNVCHFRHLPRWLQDNDY 651
           +LSDEIDLGALAHNA EQAEEFVRKVWEASW VCH+++LP+WLQDND+
Sbjct: 131 VLSDEIDLGALAHNAAEQAEEFVRKVWEASWKVCHYKNLPKWLQDNDF 178



 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
 Frame = +2

Query: 344 LRRRQGWDPDAESLASQ----MXXXXXXXXXXXXGCPLPSTPEDQHLLDAEMAEVLKAG 508
           LR+R+GW P+ +SL+      +            GCPLPSTPED  L++AEM EVLKAG
Sbjct: 73  LRKRRGWGPE-DSLSPNDLDILEYDDELVEEDDAGCPLPSTPEDTQLIEAEMTEVLKAG 130


>AE014297-3178|AAF56016.2|  444|Drosophila melanogaster CG5315-PA,
           isoform A protein.
          Length = 444

 Score = 97.9 bits (233), Expect = 1e-20
 Identities = 40/48 (83%), Positives = 46/48 (95%)
 Frame = +1

Query: 508 LLSDEIDLGALAHNAXEQAEEFVRKVWEASWNVCHFRHLPRWLQDNDY 651
           +LSDEIDLGALAHNA EQAEEFVRKVWEASW VCH+++LP+WLQDND+
Sbjct: 131 VLSDEIDLGALAHNAAEQAEEFVRKVWEASWKVCHYKNLPKWLQDNDF 178



 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
 Frame = +2

Query: 344 LRRRQGWDPDAESLASQ----MXXXXXXXXXXXXGCPLPSTPEDQHLLDAEMAEVLKAG 508
           LR+R+GW P+ +SL+      +            GCPLPSTPED  L++AEM EVLKAG
Sbjct: 73  LRKRRGWGPE-DSLSPNDLDILEYDDELVEEDDAGCPLPSTPEDTQLIEAEMTEVLKAG 130


>AY094970-1|AAM11323.1| 1118|Drosophila melanogaster SD09067p
           protein.
          Length = 1118

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 358 LPASQSIGGHALGSNIRFHFPHLRLFQSRE 269
           L A   +GGHAL  NI+  F HL+    R+
Sbjct: 427 LKADIGVGGHALAQNIKRFFSHLQHLIERD 456


>AE014297-4509|AAN14206.1|  104|Drosophila melanogaster CG7920-PB,
           isoform B protein.
          Length = 104

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 13/55 (23%), Positives = 24/55 (43%)
 Frame = -3

Query: 527 SISSDNSQLSKLQPFRHPTDVDPPVLKAADIXXXXXXXXXXXRPFERQGSPHRDP 363
           S+S+ N+  + ++   HP   +PP++K  +             P+    SP R P
Sbjct: 24  SVSAHNNYFTYVRELSHPIAREPPIVKPEEAVACVKSGESHWPPYHLARSPPRPP 78


>AE014297-4114|AAF56695.2| 1120|Drosophila melanogaster CG3368-PA
           protein.
          Length = 1120

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 358 LPASQSIGGHALGSNIRFHFPHLRLFQSRE 269
           L A   +GGHAL  NI+  F HL+    R+
Sbjct: 429 LKADIGVGGHALAQNIKRFFSHLQHLIERD 458


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,571,975
Number of Sequences: 53049
Number of extensions: 623052
Number of successful extensions: 1410
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1407
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)