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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060385.seq
         (671 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar...    88   9e-19
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz...    40   2e-04
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ...    38   0.001
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c...    35   0.009
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha...    34   0.016
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo...    32   0.065
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo...    31   0.15 
SPAC823.10c |||mitochondrial carrier with solute carrier repeats...    30   0.35 
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch...    29   0.46 
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil...    29   0.46 
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p...    29   0.61 
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom...    29   0.81 
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy...    27   1.9  
SPAC2F3.01 ||SPAC323.09|mannosyltransferase complex subunit |Sch...    27   1.9  
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c...    27   2.5  
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce...    27   3.3  
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats...    27   3.3  
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S...    26   5.7  
SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomy...    25   7.5  
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha...    25   7.5  
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra...    25   9.9  
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce...    25   9.9  
SPBC1709.19c |||NifU-like protein|Schizosaccharomyces pombe|chr ...    25   9.9  
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p...    25   9.9  

>SPBC530.10c |anc1||adenine nucleotide carrier
           Anc1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 322

 Score = 88.2 bits (209), Expect = 9e-19
 Identities = 42/85 (49%), Positives = 56/85 (65%)
 Frame = +1

Query: 1   DAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXX 180
           + F R   E+G++S WRGN ANV+RYFPTQALNFAFKDK+K++F G   ++  + ++F  
Sbjct: 76  ECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFKKMF-GYKKERDGYAKWFAG 134

Query: 181 XXXXXXXXXXTSLCFVYPLDFARTR 255
                      SL FVY LD+ARTR
Sbjct: 135 NLASGGAAGAASLLFVYSLDYARTR 159



 Score = 72.9 bits (171), Expect = 4e-14
 Identities = 40/95 (42%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
 Frame = +3

Query: 261 ADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVRGML 440
           A   K  G+R+F+GL +   K ++SDGL GLYRGFG SV GI++YR  YFG YDT++ ++
Sbjct: 164 AKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVV 223

Query: 441 ---PDPKNTPIVIXLGHRSDRNHSRRIISYPFDTV 536
              P   N      LG          + SYP DT+
Sbjct: 224 LVGPLEGNFLASFLLGWAVTTGSG--VASYPLDTI 256



 Score = 29.9 bits (64), Expect = 0.35
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +3

Query: 294 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVRGM 437
           + G+G C  +    +G+I L+RG   +V      +A  F F D  + M
Sbjct: 71  YKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFKKM 118


>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 298

 Score = 40.3 bits (90), Expect = 2e-04
 Identities = 15/50 (30%), Positives = 29/50 (58%)
 Frame = +3

Query: 291 EFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVRGML 440
           +++G  +C +KI K + ++ LY GF  ++   +++ A YFG    +R  L
Sbjct: 140 KYNGTVDCFTKIVKQERILALYNGFEATMWRHVVWNAGYFGVIQKIRNSL 189



 Score = 29.1 bits (62), Expect = 0.61
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +3

Query: 282 GQREFSGLGNCISKIFKSDGLIGLYRG 362
           G+ +++G  +C+ KI K++G   LYRG
Sbjct: 41  GKSDYNGTFDCLKKIVKNEGPHRLYRG 67



 Score = 27.9 bits (59), Expect = 1.4
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +1

Query: 1   DAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 132
           D   +I K +G    +RG    ++   P +AL FA  D Y +++
Sbjct: 50  DCLKKIVKNEGPHRLYRGILPPILMEAPKRALKFASNDTYSKLW 93


>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 317

 Score = 37.9 bits (84), Expect = 0.001
 Identities = 28/83 (33%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
 Frame = +1

Query: 10  VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXX 189
           V+I   +GL+ F+RGN  N +R FP  A+ FA  +  KQ  L    K             
Sbjct: 64  VKIWNREGLIGFFRGNGTNCLRAFPYGAVQFATFNMLKQRAL----KNRSHQNLENHERL 119

Query: 190 XXXXXXXTSLC-FVYPLDFARTR 255
                   + C   YPLD ARTR
Sbjct: 120 LFGAIAGAASCATTYPLDIARTR 142



 Score = 31.9 bits (69), Expect = 0.086
 Identities = 14/48 (29%), Positives = 27/48 (56%)
 Frame = +3

Query: 288 REFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVR 431
           +E++ L + + KI+  +GLIG +RG G +      Y A  F  ++ ++
Sbjct: 54  KEYTSLTSTLVKIWNREGLIGFFRGNGTNCLRAFPYGAVQFATFNMLK 101



 Score = 31.5 bits (68), Expect = 0.11
 Identities = 15/51 (29%), Positives = 29/51 (56%)
 Frame = +3

Query: 294 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVRGMLPD 446
           +  + + I  I+K++G+ G +RG+  ++  II   +  +  Y+TV  ML D
Sbjct: 266 YKNIKSAIFHIYKTEGINGFFRGYSSNMLKIIPVMSITWYTYETVSKMLHD 316


>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 320

 Score = 35.1 bits (77), Expect = 0.009
 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
 Frame = +3

Query: 285 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVR-----GMLPDP 449
           +R +  +G   S I + +G+ GL RG G +    I       GFY+ +R       L DP
Sbjct: 64  KRIYKSVGQAFSLIARHEGIRGLQRGLGTAYVYQICLNGCRLGFYEPIRRTLNTWFLDDP 123

Query: 450 KNTPIVIXLGHRSDRNHSRRIISYPF 527
           K   + I +   +       +   PF
Sbjct: 124 KGNKLAINVASGAGSGLCGALFGSPF 149



 Score = 29.1 bits (62), Expect = 0.61
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 309 NCISKIFKSDGLIGLYRGFGVSVQGI 386
           +CI K  +S+G   LY+GFG  +  I
Sbjct: 271 DCILKTIRSEGFFALYKGFGAHLARI 296


>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
           homolog|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 338

 Score = 34.3 bits (75), Expect = 0.016
 Identities = 14/43 (32%), Positives = 26/43 (60%)
 Frame = +3

Query: 300 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTV 428
           G+ + +  ++KS+GL+GL+RGFG  +       +  F FY+ +
Sbjct: 283 GIRHVLGGLYKSEGLLGLFRGFGPRIFWTSSQSSLMFVFYEGI 325


>SPBC29A3.11c |||mitochondrial carboxylic acid
           transporter|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 297

 Score = 32.3 bits (70), Expect = 0.065
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +3

Query: 294 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVR 431
           F  + +C     K++GL GLYRG  + +    + R+  F  YD+++
Sbjct: 50  FPTIRSCFQNAVKNEGLKGLYRGLTLPLISATLSRSVSFTVYDSLK 95


>SPBC83.13 |||mitochondrial tricarboxylic acid
           transporter|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 293

 Score = 31.1 bits (67), Expect = 0.15
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 285 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFY-DTVRGML 440
           Q    G+   I  I+K++G+ GLYRG  V   G+  Y+     F  D VRG L
Sbjct: 240 QHSSPGIMQTIMSIYKNNGIKGLYRG-AVPRMGLGAYQTFVMVFLADCVRGYL 291


>SPAC823.10c |||mitochondrial carrier with solute carrier
           repeats|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 296

 Score = 29.9 bits (64), Expect = 0.35
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +3

Query: 294 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 422
           ++ + + I  I+K +G+ G +RGFGV+      +   Y  FY+
Sbjct: 141 YTTIYSSIRDIWKKEGISGFFRGFGVTALRDAPHAGLYVYFYE 183


>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 271

 Score = 29.5 bits (63), Expect = 0.46
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = +3

Query: 309 NCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVRGMLPDPKNTPIVI 470
           N IS + +S+GL G YRG+ + V   +    S++  Y+  +  L    N  I +
Sbjct: 121 NTISTLARSEGLKGFYRGYWMGVAIYLPTTVSWWVCYEESKKYLQKQSNWDISV 174


>SPBC12D12.05c |||mitochondrial carrier, calcium binding
           subfamily|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 426

 Score = 29.5 bits (63), Expect = 0.46
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = +3

Query: 282 GQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVR 431
           GQ   S + +   +++KS G+ G YRG  V + G+  Y A+  G ++ ++
Sbjct: 264 GQHGKSIILSNAKELYKSVGIRGYYRGVLVGILGMFPYSATDLGTFEGLK 313


>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 258

 Score = 29.1 bits (62), Expect = 0.61
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = +3

Query: 315 ISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVRGML 440
           + +I+K +G+ G  +G G+ V    +  + Y G Y+ V+  L
Sbjct: 206 VRRIYKENGIFGFEKGLGLRVFASSLGLSIYLGTYEHVKSHL 247


>SPBC1703.13c |||inorganic phosphate transporter
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 311

 Score = 28.7 bits (61), Expect = 0.81
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = +3

Query: 246 TYPLAADVGK-GDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 422
           ++P    V K    ++   G G   ++I+K  G  GL+ G GV +  I     + +  YD
Sbjct: 239 SHPADVMVSKLNSNKKAGEGAGAAAARIYKEIGFSGLWNGLGVRIVMIGTLTGAQWLIYD 298

Query: 423 TVRGMLPDP 449
           + + M   P
Sbjct: 299 SFKIMCGFP 307


>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 361

 Score = 27.5 bits (58), Expect = 1.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 309 NCISKIFKSDGLIGLYRGFGVSVQGI 386
           +CI K  + +G  GLY+G   S+ G+
Sbjct: 207 DCIIKTIRLEGFRGLYKGLSASLLGV 232


>SPAC2F3.01 ||SPAC323.09|mannosyltransferase complex subunit
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 319

 Score = 27.5 bits (58), Expect = 1.9
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +3

Query: 366 GVSVQGIIIYRASYFGFYDTVRGMLPDPKNTPIVIXLGHRSD 491
           G+ + G+I+     +  Y+T+R M+P     P  + L   SD
Sbjct: 12  GIPICGVILLILWGYSLYNTLRFMVPGKATEPFTLSLSDVSD 53


>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 303

 Score = 27.1 bits (57), Expect = 2.5
 Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
 Frame = +3

Query: 288 REFSG-LGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVRGMLPDPKNTPI 464
           R  SG + N + KI  ++G+  L+RG    + G     A YF   +  +  +    + P+
Sbjct: 55  RSVSGNIVNSVIKISSTEGVYSLWRGISSVIMGAGPSHAIYFSVLEFFKSKINASPDRPL 114

Query: 465 VIXLGHRSDRNHSRRIISYPFDTV 536
              L        S   ++ PFD +
Sbjct: 115 ASALAGACAITISDAFMT-PFDVI 137



 Score = 26.2 bits (55), Expect = 4.3
 Identities = 12/51 (23%), Positives = 23/51 (45%)
 Frame = +3

Query: 288 REFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVRGML 440
           R++    +C + +F+++GL   Y  +   +   I + A     YDT    L
Sbjct: 146 RKYKSALHCATTVFRNEGLGAFYISYPTCIAMSIPFTAIQVATYDTCMSFL 196


>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 371

 Score = 26.6 bits (56), Expect = 3.3
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +1

Query: 1   DAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQF 162
           DAF +I K +GL +F+RG F ++        + F   + +K        KK+ F
Sbjct: 235 DAFRKIYKYEGLAAFYRGLFPSLFGTLHV-GIQFPLYEYFKSFLDDFFGKKSNF 287



 Score = 25.8 bits (54), Expect = 5.7
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +1

Query: 28  QGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKK 153
           +G+   +RG    ++ Y P+ ++ F   +K K +F  GV+KK
Sbjct: 65  EGIAGLYRGVGPMMLGYLPSWSIYFVVYEKCKVLF--GVNKK 104



 Score = 25.8 bits (54), Expect = 5.7
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 321 KIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVRGMLPD 446
           KI+K +GL   YRG   S+ G  ++    F  Y+  +  L D
Sbjct: 239 KIYKYEGLAAFYRGLFPSLFG-TLHVGIQFPLYEYFKSFLDD 279


>SPAC4G9.20c |||mitochondrial carrier with solute carrier
           repeats|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 302

 Score = 26.6 bits (56), Expect = 3.3
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +3

Query: 309 NCISKIFKSDGLIGLYRGFGVSVQGI 386
           +C+ KI K++GL   Y+G  + + GI
Sbjct: 60  DCVKKISKNEGLAAFYKGTVLPLLGI 85


>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 672

 Score = 25.8 bits (54), Expect = 5.7
 Identities = 23/67 (34%), Positives = 31/67 (46%)
 Frame = -2

Query: 349 PIRPSDLKILLMQFPRPENSRWPSPLPTSAASGYVRSRGGTRSTERWLRRHHRRPDYQRS 170
           P + S+L I +   P P  +   SP PT  +   +RS  G RS+    R   R   Y  S
Sbjct: 514 PSKSSNLSINIDIPPSPLQNTVISPQPTRRSRTPIRSLSG-RSSVASSRNSSRTRSY--S 570

Query: 169 NARTASS 149
           N  +ASS
Sbjct: 571 NVSSASS 577


>SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 327

 Score = 25.4 bits (53), Expect = 7.5
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +3

Query: 432 GMLPDPKNTPIV 467
           GMLPDPK+ P++
Sbjct: 89  GMLPDPKSIPVI 100


>SPAC17H9.08 |||mitochondrial coenzyme A
           transporter|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 326

 Score = 25.4 bits (53), Expect = 7.5
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 342 LIGLYRGFGVSVQGIIIYRASYFGFYD 422
           +   YRGF V++ GI  Y    F  YD
Sbjct: 184 ICNFYRGFSVTLTGIFPYAGMSFLAYD 210


>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
           transcription Rct1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 432

 Score = 25.0 bits (52), Expect = 9.9
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -2

Query: 244 RSRGGTRSTERWLRRHHRRPD--YQRSNARTASSCQHRR 134
           R R  +RS +R    +HRR D  Y RSN R     +HRR
Sbjct: 336 RKRSSSRSDDR---EYHRRSDGRYDRSNYR--DDYRHRR 369


>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 604

 Score = 25.0 bits (52), Expect = 9.9
 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 10/68 (14%)
 Frame = -2

Query: 307 PRPE-NSRWPSP---LPTSAASGYVRSRGGTRSTERWLRRH------HRRPDYQRSNART 158
           PR +  SR PSP   + +  +   VRSR   RS+     RH      HR  DY RS   +
Sbjct: 122 PRSDYGSRSPSPHSSVDSHQSRSPVRSRDRDRSSRSSRSRHPSSRSRHRYDDYSRSPPYS 181

Query: 157 ASSCQHRR 134
           +   + RR
Sbjct: 182 SRHSRSRR 189


>SPBC1709.19c |||NifU-like protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 260

 Score = 25.0 bits (52), Expect = 9.9
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -2

Query: 517 EMIRRLWLRSERWPSXITMGVFLGSGSMPRTV 422
           + IR +W+RSE  P+   +    G   +P T+
Sbjct: 38  QAIRSIWIRSEETPNENALKFLPGLDILPPTI 69


>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 275

 Score = 25.0 bits (52), Expect = 9.9
 Identities = 19/64 (29%), Positives = 24/64 (37%), Gaps = 3/64 (4%)
 Frame = -2

Query: 292 SRWPSPLPTSAASGYVRSRGGTRSTERWLRRHHRRPDYQRSNA---RTASSCQHRRGTPA 122
           SR PSP    + S Y   R   RS     R   R PD +  +    R +    HR  +P 
Sbjct: 115 SRSPSPHEARSRSPYNDERSDRRSMSPRYRSRSRSPDGRSRSPDYDRRSPKRNHRSPSPV 174

Query: 121 CTCP 110
              P
Sbjct: 175 SFAP 178


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,462,552
Number of Sequences: 5004
Number of extensions: 47813
Number of successful extensions: 183
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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