Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060385.seq
(671 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 6e-15
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 42 6e-04
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.010
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.010
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.013
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.030
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 36 0.039
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.039
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.052
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 34 0.12
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 33 0.21
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 32 0.37
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05) 31 0.64
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 31 0.84
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.84
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 30 1.5
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 29 2.6
SB_43929| Best HMM Match : TLE_N (HMM E-Value=0.49) 29 2.6
SB_3306| Best HMM Match : DUF837 (HMM E-Value=0.71) 29 2.6
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 29 2.6
SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_6969| Best HMM Match : Astacin (HMM E-Value=0) 29 3.4
SB_31266| Best HMM Match : PKI (HMM E-Value=1) 29 4.5
SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26) 29 4.5
SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) 28 6.0
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 28 6.0
SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) 28 6.0
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 28 7.9
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 28 7.9
SB_14676| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_58000| Best HMM Match : MATH (HMM E-Value=1.1e-19) 28 7.9
SB_27075| Best HMM Match : rve (HMM E-Value=1.5e-16) 28 7.9
SB_20062| Best HMM Match : Tsg101 (HMM E-Value=0.41) 28 7.9
SB_13654| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_7450| Best HMM Match : DUF1324 (HMM E-Value=6.4) 28 7.9
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 78.2 bits (184), Expect = 6e-15
Identities = 41/93 (44%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Frame = +3
Query: 261 ADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVRG-M 437
A VGK G+R+F+G+ + K SDGL+GLYRGF +S GII+YR YFG YDT++ +
Sbjct: 145 AKVGKKGGERQFNGMIDVYKKTIASDGLVGLYRGFVISCVGIIVYRGFYFGLYDTLKPIL 204
Query: 438 LPDPKNTPIVIXLGHRSDRNHSRRIISYPFDTV 536
L + I LG+ S + SYP DT+
Sbjct: 205 LGEDAGVVISFVLGY--GVTVSAGLASYPIDTI 235
Score = 74.9 bits (176), Expect = 5e-14
Identities = 43/86 (50%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 DAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRY-FX 177
D R + +G LSFWRGN AN IRYFPTQALNFAFKD+ K +F KKT F
Sbjct: 58 DCTSRTYRSEGFLSFWRGNLANCIRYFPTQALNFAFKDQVKALF---KPKKTDSNAIKFS 114
Query: 178 XXXXXXXXXXXTSLCFVYPLDFARTR 255
SL FVY LD+ RTR
Sbjct: 115 KNIASGGAAGAMSLFFVYSLDYCRTR 140
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +3
Query: 294 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVRGMLPDPKNT 458
+ G+ +C S+ ++S+G + +RG + +A F F D V+ + PK T
Sbjct: 53 YKGVIDCTSRTYRSEGFLSFWRGNLANCIRYFPTQALNFAFKDQVKALF-KPKKT 106
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/39 (46%), Positives = 29/39 (74%)
Frame = +1
Query: 10 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 126
++I KE+G+L +++GN NVIR FP A+ FA ++YK+
Sbjct: 79 IQIGKEEGILGYFKGNGTNVIRIFPYSAVQFAAYEEYKK 117
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/52 (32%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = +3
Query: 291 EFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTV-RGMLP 443
++SG+G ++KI++ +GL G ++G G ++ I+ Y A F Y+ +G+ P
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKKGIAP 641
Score = 34.3 bits (75), Expect = 0.091
Identities = 12/38 (31%), Positives = 26/38 (68%)
Frame = +1
Query: 13 RIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 126
+I +++GL +++GN N++R P A+ FA +++K+
Sbjct: 600 KIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 1 DAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFW 165
DA ++IP+ +GL S WRG ++ P + F D+ K + G + +T W
Sbjct: 65 DALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK-ISYGFKNNETNLW 118
>SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 313
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 294 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGII-IYRASYFGFYDTVRGMLPDPKNTPIVI 470
F+G +C K +++G GLY+G + G+ I+ ++GF + + DP P +
Sbjct: 68 FTGTFDCAMKTIRNEGFFGLYKGMAAPITGVTPIFAICFWGFNMGKKLQMKDPNADPTYL 127
Query: 471 XL 476
+
Sbjct: 128 QI 129
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +3
Query: 285 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVRGML 440
Q ++G +C+ K+F S+GL G +RG ++ I A YFG + V +L
Sbjct: 294 QMAYTGSLDCLKKVFHSEGLRGCFRGMAITTTRDIPAFALYFGSFQYVCELL 345
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +3
Query: 294 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFG 413
++G+ +C +I K + ++GLY+G + G+ + A FG
Sbjct: 191 YNGVFDCFKQIIKRESVLGLYKGMASPLAGLGLINAIIFG 230
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 291 EFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVRGML 440
+FSG+ + K++G+ L++G G ++ G+ RA YF Y ++ ML
Sbjct: 773 KFSGIVPYARYMVKNEGIQSLFKGLGTTLLGVTPSRAIYFAIYSKLKDML 822
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 35.9 bits (79), Expect = 0.030
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +1
Query: 7 FVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKK 153
F + +E G+ S WRGN ANVI+ P + F +K K+ L G D K
Sbjct: 180 FKMMLREGGIKSLWRGNGANVIKIAPESGIKFFAYEKAKK--LVGSDTK 226
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 291 EFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVR 431
++ GL + S I++ +G+ YRG S+ GII Y Y+T++
Sbjct: 265 QYRGLLHAASVIYQKEGIRSFYRGLFPSLLGIIPYAGIDLAVYETLK 311
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 35.5 bits (78), Expect = 0.039
Identities = 14/49 (28%), Positives = 31/49 (63%)
Frame = +3
Query: 285 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVR 431
+++++GL N ++I++ +G+ YRG+ ++ GI+ Y F Y+T +
Sbjct: 22 KKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYETCK 70
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 35.5 bits (78), Expect = 0.039
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 7 FVRIPKEQGLLSFWRGNFANVIRYFPTQALNFA 105
F + K +G+ +FW+GN + IR FP A+ +A
Sbjct: 101 FASVYKREGIKAFWKGNGVSCIRLFPYSAVQYA 133
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +3
Query: 300 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVRGMLPDPKN 455
GL + ++K +G+ ++G GVS + Y A + ++ + L DP N
Sbjct: 96 GLIRTFASVYKREGIKAFWKGNGVSCIRLFPYSAVQYAAFNRIVASLEDPHN 147
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 35.1 bits (77), Expect = 0.052
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +1
Query: 4 AFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 129
AF I + +GLL++++GN A ++R FP A+ F + Y +V
Sbjct: 16 AFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKV 57
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 309 NCISKIFKSDGLI-GLYRGFGVSVQGIIIYRASYFGFYDTVRGML 440
N + ++K DG+ GLYRG ++ + A FG Y+ + L
Sbjct: 217 NTLVNVYKDDGIRRGLYRGLSINYLRVCPQVAIMFGVYEVTKQFL 261
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 33.9 bits (74), Expect = 0.12
Identities = 23/91 (25%), Positives = 37/91 (40%)
Frame = +1
Query: 1 DAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXX 180
+A R+ KE+G+L+ WRG +R A A + KQ+ L + +F
Sbjct: 40 NALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQLLLSTKYFEDNIVCHFGA 99
Query: 181 XXXXXXXXXXTSLCFVYPLDFARTRSPPMSV 273
S+ P+D A+TR M +
Sbjct: 100 SMISGLATTVASM----PVDIAKTRIQNMRI 126
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/29 (31%), Positives = 21/29 (72%)
Frame = +3
Query: 279 DGQREFSGLGNCISKIFKSDGLIGLYRGF 365
DG+ E+ G + +++I +++G+ L++GF
Sbjct: 128 DGKPEYKGTMDVLARIVRNEGVFALWKGF 156
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +1
Query: 16 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 129
+P+E L W G F++VI F A+N AF+++YK++
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKI 309
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +3
Query: 279 DGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVRGMLPD 446
+ ++ + +C K+ +++G IGLYRG + G+ +A D VRG+ D
Sbjct: 949 EAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGVSPEKAIKLTTNDFVRGIFSD 1004
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/35 (34%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +3
Query: 267 VGKGDGQR-EFSGLGNCISKIFKSDGLIGLYRGFG 368
V K G + + GLG+C+ +++++ GL G+++G G
Sbjct: 190 VQKESGTKARYQGLGDCLLQVYRTGGLRGVFKGLG 224
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 32.3 bits (70), Expect = 0.37
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 16 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 129
+P+E +L W G ++VI F A+N F+D+YK++
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKKL 176
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 31.9 bits (69), Expect = 0.48
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +3
Query: 294 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVRGMLPD 446
+ G +C+ K K G++GLYRG + G + + F ++ ++ + D
Sbjct: 79 YRGPIDCVKKTVKGHGVLGLYRGLSSLLYGSVPKASVRFAVFEYLKNKMAD 129
>SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05)
Length = 383
Score = 31.5 bits (68), Expect = 0.64
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 309 NCISKIFKSDGLIGLYRGFGVSVQGIIIY 395
+C I++ +G+ G YRGFG + ++Y
Sbjct: 332 DCFRTIYQQEGIFGFYRGFGALLIQCVVY 360
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 31.1 bits (67), Expect = 0.84
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +3
Query: 267 VGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTV 428
+ + G+ ++G+ +C KI+ ++GL Y+G +V +I+ A FG TV
Sbjct: 236 LNRPQGEPNYNGIIDCAKKIYSNEGLAAFYKG---AVPRMIVI-APLFGIAQTV 285
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 294 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 422
+ G +C+ K+++S GL G ++G V+ I A YFG Y+
Sbjct: 75 YRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGFAVYFGVYE 117
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = +3
Query: 294 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVRGML 440
+ G+ +C + +FK +G+ YR + + I ++ +F Y+ R L
Sbjct: 32 YRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPFQTLHFTVYEYARKAL 80
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 22 KEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF--LGGVDKKT 156
KE+G+ +F+R + P Q L+F + ++ LGG D KT
Sbjct: 44 KEEGIRAFYRSYTTQLSMNIPFQTLHFTVYEYARKALNPLGGYDPKT 90
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 496 TTVAVSSPIPSTQSXXXXXXQSGRAKSDILYKNTXHCWAT 615
TT AV+SPIPST+S + +AK+ N + W T
Sbjct: 351 TTTAVTSPIPSTKSPVRIEVRKQKAKAP-ADTNKNYSWRT 389
>SB_43929| Best HMM Match : TLE_N (HMM E-Value=0.49)
Length = 351
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +3
Query: 273 KGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVRGML 440
+G+ +E +GLG+ + + S G IGL G VQ +I+ + + G D VR ++
Sbjct: 104 EGEMPKEATGLGDQVRSVIMSKGAIGL----GDQVQSVIMSKRA-IGLGDQVRSVI 154
>SB_3306| Best HMM Match : DUF837 (HMM E-Value=0.71)
Length = 238
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +3
Query: 273 KGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVRGML 440
+G+ +E +GLG+ + + S G IGL G VQ +I+ + + G D VR ++
Sbjct: 55 EGEMPKEATGLGDQVRSVIMSKGAIGL----GDQVQSVIMSKRA-IGLGDQVRSVI 105
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +3
Query: 294 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVRGMLPD 446
+ G+ + +FK++G+ +Y+G + + + + G YD V+ M D
Sbjct: 66 YRGMLGTMVTLFKTEGMKTMYKGLIPGIHRQLCFASIRIGLYDQVKAMYGD 116
>SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -2
Query: 244 RSRGGTRSTERWLRRHHRRPDYQRSNARTAS-SC 146
RS+ +R++ RWL R R+P S+ R++S SC
Sbjct: 13 RSQVRSRNSNRWLLRQQRQPQRHLSHKRSSSNSC 46
>SB_6969| Best HMM Match : Astacin (HMM E-Value=0)
Length = 225
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +3
Query: 300 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASY-FGFYDTVRGMLPDPKNTPIVIXL 476
G C S + + G+ + GFG QG++++ + GFY PD N ++
Sbjct: 88 GFSKCWSYVGRIGGMQKISIGFGCFTQGVVVHEIGHALGFYH--EQSRPDRDNYVEIVWS 145
Query: 477 GHRSDRNHS 503
+ + H+
Sbjct: 146 NIKEENKHN 154
>SB_31266| Best HMM Match : PKI (HMM E-Value=1)
Length = 1507
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 391 MMIPCTDTPKPLYRPIRPSDLKILLMQ 311
+++PC P LYR +RP L+I + Q
Sbjct: 587 IILPCPSDPCSLYRELRPQALQIQMSQ 613
>SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26)
Length = 205
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 288 REFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVRGM 437
+++ + N K DG+ GL RG+ + G + FGFY+ + M
Sbjct: 88 KKYGSMVNGFKITLKEDGVRGLARGWAPTFIGYSMQGLGKFGFYEVFKIM 137
>SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 19 PKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 135
P+E L W G ++VI F +N F++++K+++L
Sbjct: 815 PRELYLFYSWLGALSSVINPFIYGVMNPMFREEFKRIYL 853
>SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)
Length = 343
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +1
Query: 16 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 132
+P+E L + G ++VI F A+N F+++YK+VF
Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVF 301
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +3
Query: 267 VGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVS 374
+ K G + G +C+ +I++ G+ G+Y+G V+
Sbjct: 167 IEKAFGGSSYGGPVDCLRRIYREAGVRGVYKGISVT 202
>SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)
Length = 368
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1
Query: 16 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 129
+P+E +L + G ++VI F A+N FK++YK++
Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKI 304
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +3
Query: 243 RTYPLAADVGKGDGQREFSGLGNCISKIFKSDGLI-GLYRGFGVSVQGIIIYRASYFGFY 419
R LA V G ++S N ++ DG+ GLYRG ++ + A F Y
Sbjct: 132 RRMQLAGTVADG---HKYSTCINTFISVYTEDGIRRGLYRGLSINYLRVCPQVAVMFAVY 188
Query: 420 DTVRGML 440
+ V+ +L
Sbjct: 189 EVVKQLL 195
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +3
Query: 270 GKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQ----GIIIYRASYFGFYDTVRGM 437
G+GD + + G I + F G G Y+G+ S+ I+ ASY GFY V G
Sbjct: 137 GQGDRKVKLKGARILIRETFHQHGPGGFYKGYFASLMTYAPSSAIWWASY-GFYTGVIGN 195
Query: 438 L 440
L
Sbjct: 196 L 196
>SB_14676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 905
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +3
Query: 309 NCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVRGMLPDPKNTPIVIXLGHRS 488
NC+ + +S +GL F S + + SY G T +G+ PDP+ +I + +
Sbjct: 543 NCLMVLERSRE-VGLK--FNPSKVKLRVDEVSYVGHRLTSQGLQPDPEKIQAIIDMPPPT 599
Query: 489 DRNHSRRII 515
D+ +R+I
Sbjct: 600 DKEGVQRLI 608
>SB_58000| Best HMM Match : MATH (HMM E-Value=1.1e-19)
Length = 1451
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +3
Query: 309 NCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVRGMLPDPKNTPIVIXLGHRS 488
NC+ + +S +GL F S + + SY G T +G+ PDP+ +I + +
Sbjct: 543 NCLMVLERSRE-VGLK--FNPSKVKLRVDEVSYVGHRLTSQGLQPDPEKIQAIIDMPPPT 599
Query: 489 DRNHSRRII 515
D+ +R+I
Sbjct: 600 DKEGVQRLI 608
>SB_27075| Best HMM Match : rve (HMM E-Value=1.5e-16)
Length = 656
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +3
Query: 315 ISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVRGMLPDPKNTPIVIXLGHRSDR 494
+S + + +GL F S + + SY G T +G+ PDP+ VI + +D+
Sbjct: 31 LSMVLERSREVGLK--FNPSKVKLRVDEVSYVGHRLTSQGLQPDPEKIKAVIDMPPPTDK 88
Query: 495 NHSRRII 515
+R+I
Sbjct: 89 EGVQRLI 95
>SB_20062| Best HMM Match : Tsg101 (HMM E-Value=0.41)
Length = 686
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 419 RHGPRHAARP*EHTHCNXAGPSLRP*PQSPYHLLSLRHSP 538
R P H P HTH N A S +P HL + R++P
Sbjct: 425 RQAPGHRT-PDRHTHNNHAPESYPAAQHTPEHLTNTRNTP 463
>SB_13654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1451
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +3
Query: 315 ISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTVRGMLPDPKNTPIVIXLGHRSDR 494
+S + + +GL F S + + + SY G T +G+ PDP+ VI + D+
Sbjct: 491 LSMVLERSREVGLK--FNPSKVKLRVDKVSYVGHRLTSQGLQPDPEKIKAVIDMPPPRDK 548
Query: 495 NHSRRII 515
+R+I
Sbjct: 549 EGVQRLI 555
>SB_7450| Best HMM Match : DUF1324 (HMM E-Value=6.4)
Length = 400
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -2
Query: 301 PENSRWPSPLPTSAASGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTASSCQHRRGTPA 122
PE+ + P+ P + S + +GG+ + L R R +Q +N +SS + GT
Sbjct: 103 PEDRKSPAKSPRTIVSDHRVIKGGSPRVDLELVRQKRLKHFQLTN--KSSSLERDNGTSE 160
Query: 121 C 119
C
Sbjct: 161 C 161
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,056,671
Number of Sequences: 59808
Number of extensions: 421954
Number of successful extensions: 1272
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1266
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1721264831
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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