Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060381.seq
(564 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 167 5e-42
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 167 7e-42
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 166 1e-41
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 163 9e-41
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 132 1e-31
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 1e-30
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 91 6e-19
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 91 6e-19
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 90 1e-18
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 3e-18
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 3e-18
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 3e-18
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 88 4e-18
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 3e-17
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 4e-17
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 2e-14
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 74 9e-14
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 71 9e-13
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 68 5e-12
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 61 7e-10
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 55 3e-08
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 2e-07
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 46 3e-05
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 45 4e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 34 0.070
SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4) 33 0.16
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 31 0.86
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 2.0
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 28 4.6
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 167 bits (406), Expect = 5e-42
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR
Sbjct: 62 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 121
Query: 437 KEAESCDCLQGFQLTH 484
KEAESCDCLQGFQLTH
Sbjct: 122 KEAESCDCLQGFQLTH 137
Score = 130 bits (313), Expect = 1e-30
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 254
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 531 KIREEYPDRIM 563
KIREEYPDRIM
Sbjct: 154 KIREEYPDRIM 164
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 167 bits (405), Expect = 7e-42
Identities = 75/76 (98%), Positives = 76/76 (100%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR
Sbjct: 275 RAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 334
Query: 437 KEAESCDCLQGFQLTH 484
KEAESCDCLQGFQLTH
Sbjct: 335 KEAESCDCLQGFQLTH 350
Score = 135 bits (326), Expect = 3e-32
Identities = 60/69 (86%), Positives = 63/69 (91%)
Frame = +3
Query: 48 IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYY 227
+YSS KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264
Query: 228 NEASGGKYV 254
NEA+GGKYV
Sbjct: 265 NEATGGKYV 273
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 531 KIREEYPDRIM 563
KIREEYPDRIM
Sbjct: 367 KIREEYPDRIM 377
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 166 bits (403), Expect = 1e-41
Identities = 74/76 (97%), Positives = 76/76 (100%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR
Sbjct: 7 RAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 66
Query: 437 KEAESCDCLQGFQLTH 484
KEAESCDC+QGFQLTH
Sbjct: 67 KEAESCDCIQGFQLTH 82
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 528 LKIREEYPDRIM 563
LKIREEYPDRIM
Sbjct: 98 LKIREEYPDRIM 109
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 163 bits (396), Expect = 9e-41
Identities = 71/76 (93%), Positives = 76/76 (100%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
R++L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVR
Sbjct: 62 RSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVVR 121
Query: 437 KEAESCDCLQGFQLTH 484
KEAESCDC+QGFQLTH
Sbjct: 122 KEAESCDCIQGFQLTH 137
Score = 127 bits (307), Expect = 5e-30
Identities = 55/60 (91%), Positives = 58/60 (96%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 254
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 531 KIREEYPDRIM 563
KIREEYPDRIM
Sbjct: 154 KIREEYPDRIM 164
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 132 bits (320), Expect = 1e-31
Identities = 56/74 (75%), Positives = 66/74 (89%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
R+ILVDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D++ DV+R
Sbjct: 18 RSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVLR 77
Query: 437 KEAESCDCLQGFQL 478
KEAE+CDC+QG QL
Sbjct: 78 KEAENCDCMQGVQL 91
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 130 bits (313), Expect = 1e-30
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 254
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Score = 69.3 bits (162), Expect = 2e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 349
RAILVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 62 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 91.1 bits (216), Expect = 6e-19
Identities = 40/76 (52%), Positives = 53/76 (69%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RA+ VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD +R
Sbjct: 64 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLDRIR 123
Query: 437 KEAESCDCLQGFQLTH 484
K A+ C LQGF + H
Sbjct: 124 KLADQCTGLQGFLIFH 139
Score = 90.6 bits (215), Expect = 8e-19
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +R
Sbjct: 497 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDRIR 556
Query: 437 KEAESCDCLQGFQLTH 484
K A+ C LQGF + H
Sbjct: 557 KLADQCTGLQGFLIFH 572
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 248
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 249 YV 254
+V
Sbjct: 61 HV 62
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 78 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 251
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 252 V 254
V
Sbjct: 495 V 495
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 91.1 bits (216), Expect = 6e-19
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +R
Sbjct: 649 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIR 708
Query: 437 KEAESCDCLQGFQLTH 484
K A+ C LQGF + H
Sbjct: 709 KLADQCTGLQGFLIFH 724
Score = 90.2 bits (214), Expect = 1e-18
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +R
Sbjct: 128 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 187
Query: 437 KEAESCDCLQGFQLTH 484
K A+ C LQGF + H
Sbjct: 188 KLADQCTGLQGFLIFH 203
Score = 47.2 bits (107), Expect = 9e-06
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 248
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 249 YV 254
+V
Sbjct: 646 HV 647
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 78 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 251
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 252 V 254
V
Sbjct: 574 V 574
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 78 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 251
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 252 V 254
V
Sbjct: 126 V 126
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 90.2 bits (214), Expect = 1e-18
Identities = 38/76 (50%), Positives = 53/76 (69%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +R
Sbjct: 63 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIR 122
Query: 437 KEAESCDCLQGFQLTH 484
K A+ C LQGF + H
Sbjct: 123 KLADQCTGLQGFLIFH 138
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 78 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 251
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 252 V 254
V
Sbjct: 61 V 61
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 88.6 bits (210), Expect = 3e-18
Identities = 37/76 (48%), Positives = 52/76 (68%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +R
Sbjct: 868 RAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDRIR 927
Query: 437 KEAESCDCLQGFQLTH 484
K A+ C LQGF + H
Sbjct: 928 KLADQCTGLQGFLIFH 943
Score = 87.8 bits (208), Expect = 5e-18
Identities = 38/76 (50%), Positives = 52/76 (68%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD +R
Sbjct: 435 RAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDRLR 494
Query: 437 KEAESCDCLQGFQLTH 484
K A+ C LQGF + H
Sbjct: 495 KLADGCTGLQGFLIFH 510
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 78 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 251
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 252 V 254
V
Sbjct: 433 V 433
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 78 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 251
RE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 252 V 254
V
Sbjct: 866 V 866
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 88.6 bits (210), Expect = 3e-18
Identities = 37/76 (48%), Positives = 53/76 (69%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VLD +R
Sbjct: 64 RAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLDRLR 123
Query: 437 KEAESCDCLQGFQLTH 484
K A+ C LQGF + H
Sbjct: 124 KLADGCTGLQGFLIFH 139
Score = 47.2 bits (107), Expect = 9e-06
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 248
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 249 YV 254
+V
Sbjct: 61 HV 62
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 88.6 bits (210), Expect = 3e-18
Identities = 36/76 (47%), Positives = 53/76 (69%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RA+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+VLD +R
Sbjct: 482 RAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDRIR 541
Query: 437 KEAESCDCLQGFQLTH 484
K A+ C LQGF + H
Sbjct: 542 KLADQCSGLQGFLVFH 557
Score = 85.4 bits (202), Expect = 3e-17
Identities = 36/76 (47%), Positives = 52/76 (68%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +R
Sbjct: 49 RAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLR 108
Query: 437 KEAESCDCLQGFQLTH 484
K A+ C LQGF + H
Sbjct: 109 KLADQCTGLQGFLIFH 124
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 78 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 251
RE V I GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 252 V 254
V
Sbjct: 480 V 480
Score = 31.9 bits (69), Expect = 0.37
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 120 IGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKYV 254
+G WE+ EHGI P G D + + N +++E GK+V
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 47
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 88.2 bits (209), Expect = 4e-18
Identities = 38/76 (50%), Positives = 52/76 (68%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD R
Sbjct: 64 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRCR 123
Query: 437 KEAESCDCLQGFQLTH 484
K A+ C LQGF + H
Sbjct: 124 KLADQCTGLQGFLIFH 139
Score = 47.6 bits (108), Expect = 7e-06
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 248
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 249 YV 254
+V
Sbjct: 61 HV 62
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 85.4 bits (202), Expect = 3e-17
Identities = 36/76 (47%), Positives = 51/76 (67%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RA+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +R
Sbjct: 29 RAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIR 88
Query: 437 KEAESCDCLQGFQLTH 484
K A+ C LQGF + H
Sbjct: 89 KLADQCTGLQGFLIFH 104
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 85.0 bits (201), Expect = 4e-17
Identities = 35/76 (46%), Positives = 52/76 (68%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RA+LVDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E+V+ V+D +R
Sbjct: 975 RAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVMDKIR 1034
Query: 437 KEAESCDCLQGFQLTH 484
K + C LQGF + H
Sbjct: 1035 KMTDQCSGLQGFLIFH 1050
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 76.2 bits (179), Expect = 2e-14
Identities = 32/64 (50%), Positives = 44/64 (68%)
Frame = +2
Query: 293 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 472
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Query: 473 QLTH 484
+ H
Sbjct: 73 LIFH 76
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 73.7 bits (173), Expect = 9e-14
Identities = 31/62 (50%), Positives = 43/62 (69%)
Frame = +2
Query: 299 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQL 478
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF +
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLI 62
Query: 479 TH 484
H
Sbjct: 63 FH 64
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 70.5 bits (165), Expect = 9e-13
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = +2
Query: 353 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 484
Q+ A NNWAKG YTEGAEL+DS +D +RK AE+CD +QGFQ+ H
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAH 45
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 68.1 bits (159), Expect = 5e-12
Identities = 28/62 (45%), Positives = 41/62 (66%)
Frame = +2
Query: 299 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQL 478
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK A+ C LQGF +
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 62
Query: 479 TH 484
H
Sbjct: 63 FH 64
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 60.9 bits (141), Expect = 7e-10
Identities = 32/76 (42%), Positives = 43/76 (56%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RA+ VDLEP + P+ + G+ A NN+A+GHYT G + VD VLD +R
Sbjct: 64 RAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLDRLR 113
Query: 437 KEAESCDCLQGFQLTH 484
K A+ C LQGF + H
Sbjct: 114 KLADQCSGLQGFFIFH 129
Score = 47.2 bits (107), Expect = 9e-06
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 248
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 249 YV 254
+V
Sbjct: 61 HV 62
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +2
Query: 299 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 439
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 55.2 bits (127), Expect = 3e-08
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Frame = +2
Query: 248 VRARAILVDLEPGTMDSVRS--GPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVDS 418
+ ARA+ +D+E + S G P F Q G+GNNWA G G + +D
Sbjct: 64 LNARAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSIDK 123
Query: 419 VLDVVRKEAESCDCLQGF 472
VLD+V++E E CD L GF
Sbjct: 124 VLDLVQREVEKCDRLDGF 141
Score = 32.3 bits (70), Expect = 0.28
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 84 IVHIQAGQCGNQIGAKFWEIISDE 155
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 299 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 439
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 248
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 249 YV 254
+V
Sbjct: 61 HV 62
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYNEASG 242
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 243 GKY 251
GK+
Sbjct: 254 GKH 256
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 45.6 bits (103), Expect = 3e-05
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Frame = +2
Query: 242 RQVRARAILVDLEPGTMDSVR--SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE-----G 400
R + R + VD E + S R G GQ R N + G+ G GNN+A G++ G
Sbjct: 35 RDGKLRCVCVDSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGG 93
Query: 401 AELVDSVLDVVRKEAESCDCLQGFQLTH 484
L+ +D +RKE E CD G + H
Sbjct: 94 TSLLHMTMDAMRKEVERCDSFAGTIVMH 121
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 45.2 bits (102), Expect = 4e-05
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +2
Query: 242 RQVRARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 376
+ ++ARA+L+D+E G ++++ GP +F + SG GNNW
Sbjct: 71 KSLKARAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +3
Query: 132 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 233
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 34.3 bits (75), Expect = 0.070
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2
Query: 431 VRKEAESCDCLQGFQLTH 484
+RKEAE CD +QGFQL H
Sbjct: 1 MRKEAEDCDAIQGFQLLH 18
>SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4)
Length = 384
Score = 33.1 bits (72), Expect = 0.16
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = -3
Query: 469 SLEAITRFRFLSNDV*N*IDELSTLRVVSLGPVVTGAGLSEDEVVRTEDLSERSRADRVH 290
S++A R R +S V I +L V++L PV+ G +++D V + RSR R H
Sbjct: 204 SVDATLRGRDISAGVYQEIRDLGGAGVIALKPVMRGPDINDDGSVCQKRRPNRSRCPRRH 263
Query: 289 GAGL 278
G+
Sbjct: 264 RCGI 267
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 30.7 bits (66), Expect = 0.86
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1
Query: 450 DSASFRTTSKTESTSSAPSV*CPLAQL 370
DSASFR +S + ++ SV CPL QL
Sbjct: 2663 DSASFRNSSNDKESADPSSVRCPLLQL 2689
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 2.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 387 CPLAQLLPAPDCPKTKLSGRKICP 316
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 2.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 387 CPLAQLLPAPDCPKTKLSGRKICP 316
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.9 bits (59), Expect = 6.1
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 387 CPLAQLLPAPDCPKTKLSGRKICP 316
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 387 CPLAQLLPAPDCPKTKLSGRKICP 316
CPL ++L P CP ++ +CP
Sbjct: 51 CPLKEMLDTPLCPLKEMLDTPLCP 74
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 387 CPLAQLLPAPDCPKTKLSGRKICP 316
CPL ++L P CP ++ +CP
Sbjct: 73 CPLKEMLNTPLCPLKEMLNTPLCP 96
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 387 CPLAQLLPAPDCPKTKLSGRKICP 316
CPL ++L P CP ++ +CP
Sbjct: 128 CPLKEMLNTPLCPLKEMLNTPLCP 151
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 387 CPLAQLLPAPDCPKTKLSGRKICP 316
CPL ++L P CP ++ +CP
Sbjct: 139 CPLKEMLNTPLCPLKEMLNTPLCP 162
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 387 CPLAQLLPAPDCPKTKLSGRKICP 316
CPL ++L P CP ++ +CP
Sbjct: 150 CPLKEMLNTPLCPLKEMLNTPLCP 173
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 363 APDCPKTKLSGRKICPKGPERTESMVPGSKS 271
A DCP ++ +GR +CP P +S + +K+
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKA 168
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 230 IVVYIDALQLQVRVPM-VSTGGVDAVLVGDDLPEL 129
I VY DA++LQV P+ G+D + V D EL
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVEL 82
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,617,728
Number of Sequences: 59808
Number of extensions: 333196
Number of successful extensions: 957
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1325051197
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -