Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060381.seq
(564 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 163 8e-41
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 163 1e-40
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 163 1e-40
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 161 3e-40
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 159 1e-39
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 159 1e-39
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 106 1e-23
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 106 1e-23
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 95 2e-20
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 89 2e-18
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 88 4e-18
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 88 4e-18
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 88 4e-18
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 88 4e-18
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 86 1e-17
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 86 1e-17
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 85 3e-17
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 85 3e-17
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 85 3e-17
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 85 3e-17
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 85 3e-17
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 85 4e-17
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 78 5e-15
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 78 5e-15
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 66 1e-11
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 66 1e-11
AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical... 28 4.0
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 27 7.0
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 163 bits (396), Expect = 8e-41
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVVR
Sbjct: 62 RAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVR 121
Query: 437 KEAESCDCLQGFQLTH 484
KEAE CDCLQGFQLTH
Sbjct: 122 KEAEGCDCLQGFQLTH 137
Score = 121 bits (292), Expect = 3e-28
Identities = 52/60 (86%), Positives = 56/60 (93%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 254
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 531 KIREEYPDRIM 563
KIREEYPDRIM
Sbjct: 154 KIREEYPDRIM 164
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 163 bits (395), Expect = 1e-40
Identities = 71/76 (93%), Positives = 75/76 (98%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+R
Sbjct: 62 RAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIR 121
Query: 437 KEAESCDCLQGFQLTH 484
KEAE CDCLQGFQLTH
Sbjct: 122 KEAEGCDCLQGFQLTH 137
Score = 114 bits (274), Expect = 5e-26
Identities = 48/60 (80%), Positives = 55/60 (91%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 254
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 163 bits (395), Expect = 1e-40
Identities = 71/76 (93%), Positives = 75/76 (98%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+R
Sbjct: 62 RAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIR 121
Query: 437 KEAESCDCLQGFQLTH 484
KEAE CDCLQGFQLTH
Sbjct: 122 KEAEGCDCLQGFQLTH 137
Score = 113 bits (271), Expect = 1e-25
Identities = 47/60 (78%), Positives = 55/60 (91%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 254
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 531 KIREEYPDRIM 563
KIREEYPDRIM
Sbjct: 154 KIREEYPDRIM 164
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 161 bits (391), Expect = 3e-40
Identities = 71/76 (93%), Positives = 75/76 (98%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RA LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVVR
Sbjct: 62 RACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVR 121
Query: 437 KEAESCDCLQGFQLTH 484
KEAESCDCLQGFQ+TH
Sbjct: 122 KEAESCDCLQGFQMTH 137
Score = 132 bits (318), Expect = 2e-31
Identities = 58/60 (96%), Positives = 60/60 (100%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 254
MREIVHIQAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 531 KIREEYPDRIM 563
KIREEYPDRIM
Sbjct: 154 KIREEYPDRIM 164
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 159 bits (387), Expect = 1e-39
Identities = 71/76 (93%), Positives = 75/76 (98%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVVR
Sbjct: 62 RAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVR 121
Query: 437 KEAESCDCLQGFQLTH 484
KEAES DCLQGFQLTH
Sbjct: 122 KEAESTDCLQGFQLTH 137
Score = 119 bits (286), Expect = 2e-27
Identities = 52/60 (86%), Positives = 55/60 (91%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 254
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 531 KIREEYPDRIM 563
KIREEYPDRIM
Sbjct: 154 KIREEYPDRIM 164
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 159 bits (387), Expect = 1e-39
Identities = 71/76 (93%), Positives = 75/76 (98%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVVR
Sbjct: 62 RAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVR 121
Query: 437 KEAESCDCLQGFQLTH 484
KEAES DCLQGFQLTH
Sbjct: 122 KEAESTDCLQGFQLTH 137
Score = 119 bits (286), Expect = 2e-27
Identities = 52/60 (86%), Positives = 55/60 (91%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 254
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 531 KIREEYPDRIM 563
KIREEYPDRIM
Sbjct: 154 KIREEYPDRIM 164
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 106 bits (254), Expect = 1e-23
Identities = 46/81 (56%), Positives = 65/81 (80%)
Frame = +2
Query: 242 RQVRARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 421
R+ RAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD V
Sbjct: 57 RKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKV 116
Query: 422 LDVVRKEAESCDCLQGFQLTH 484
L V+R+EAE+ D L+GFQL H
Sbjct: 117 LSVIRREAEAADSLEGFQLIH 137
Score = 90.6 bits (215), Expect = 7e-19
Identities = 38/60 (63%), Positives = 45/60 (75%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 254
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 106 bits (254), Expect = 1e-23
Identities = 46/81 (56%), Positives = 65/81 (80%)
Frame = +2
Query: 242 RQVRARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 421
R+ RAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD V
Sbjct: 57 RKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKV 116
Query: 422 LDVVRKEAESCDCLQGFQLTH 484
L V+R+EAE+ D L+GFQL H
Sbjct: 117 LSVIRREAEAADSLEGFQLIH 137
Score = 90.6 bits (215), Expect = 7e-19
Identities = 38/60 (63%), Positives = 45/60 (75%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 254
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 95.5 bits (227), Expect = 2e-20
Identities = 40/76 (52%), Positives = 55/76 (72%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RAI VDLEP +D +R+G +G +F PD + G+ A NN+A+GHYT G EL+D VLD +R
Sbjct: 67 RAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRIR 126
Query: 437 KEAESCDCLQGFQLTH 484
K+ E+C+ LQGF + H
Sbjct: 127 KQTENCEGLQGFLVFH 142
Score = 44.8 bits (101), Expect = 4e-05
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +3
Query: 78 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG-AYHGDSDLQLERINVYYNEASGGKYV 254
RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 89.0 bits (211), Expect = 2e-18
Identities = 38/76 (50%), Positives = 52/76 (68%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RAI VDLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V+D VR
Sbjct: 64 RAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVR 123
Query: 437 KEAESCDCLQGFQLTH 484
+ E C LQGF + H
Sbjct: 124 RLTERCQSLQGFLIFH 139
Score = 52.0 bits (119), Expect = 3e-07
Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGK 248
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 249 YV 254
+V
Sbjct: 61 HV 62
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 88.2 bits (209), Expect = 4e-18
Identities = 36/76 (47%), Positives = 55/76 (72%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
R+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +R
Sbjct: 62 RSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIR 121
Query: 437 KEAESCDCLQGFQLTH 484
+ A++C LQGF + H
Sbjct: 122 RLADNCSGLQGFFVFH 137
Score = 52.4 bits (120), Expect = 2e-07
Identities = 23/60 (38%), Positives = 32/60 (53%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 254
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 88.2 bits (209), Expect = 4e-18
Identities = 36/76 (47%), Positives = 55/76 (72%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
R+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +R
Sbjct: 62 RSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIR 121
Query: 437 KEAESCDCLQGFQLTH 484
+ A++C LQGF + H
Sbjct: 122 RLADNCSGLQGFFVFH 137
Score = 54.4 bits (125), Expect = 5e-08
Identities = 23/60 (38%), Positives = 31/60 (51%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 254
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 88.2 bits (209), Expect = 4e-18
Identities = 36/76 (47%), Positives = 55/76 (72%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
R+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +R
Sbjct: 62 RSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIR 121
Query: 437 KEAESCDCLQGFQLTH 484
+ A++C LQGF + H
Sbjct: 122 RLADNCSGLQGFFVFH 137
Score = 54.4 bits (125), Expect = 5e-08
Identities = 23/60 (38%), Positives = 31/60 (51%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 254
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 88.2 bits (209), Expect = 4e-18
Identities = 36/76 (47%), Positives = 55/76 (72%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
R+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +R
Sbjct: 62 RSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIR 121
Query: 437 KEAESCDCLQGFQLTH 484
+ A++C LQGF + H
Sbjct: 122 RLADNCSGLQGFFVFH 137
Score = 52.4 bits (120), Expect = 2e-07
Identities = 23/60 (38%), Positives = 32/60 (53%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 254
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 86.2 bits (204), Expect = 1e-17
Identities = 35/76 (46%), Positives = 54/76 (71%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
R+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +R
Sbjct: 62 RSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIR 121
Query: 437 KEAESCDCLQGFQLTH 484
+ A++C LQGF + H
Sbjct: 122 RLADNCSGLQGFFVFH 137
Score = 50.0 bits (114), Expect = 1e-06
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 254
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 86.2 bits (204), Expect = 1e-17
Identities = 35/76 (46%), Positives = 54/76 (71%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
R+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +R
Sbjct: 62 RSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIR 121
Query: 437 KEAESCDCLQGFQLTH 484
+ A++C LQGF + H
Sbjct: 122 RLADNCSGLQGFFVFH 137
Score = 50.0 bits (114), Expect = 1e-06
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 254
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 85.4 bits (202), Expect = 3e-17
Identities = 34/76 (44%), Positives = 53/76 (69%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD +R
Sbjct: 64 RAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIR 123
Query: 437 KEAESCDCLQGFQLTH 484
+ A++C LQGF + H
Sbjct: 124 RLADNCTGLQGFLVFH 139
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 248
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 249 YV 254
+V
Sbjct: 61 HV 62
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 85.4 bits (202), Expect = 3e-17
Identities = 34/76 (44%), Positives = 53/76 (69%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD +R
Sbjct: 63 RAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIR 122
Query: 437 KEAESCDCLQGFQLTH 484
+ A++C LQGF + H
Sbjct: 123 RLADNCTGLQGFLVFH 138
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +3
Query: 78 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 251
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 252 V 254
V
Sbjct: 61 V 61
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 85.4 bits (202), Expect = 3e-17
Identities = 34/76 (44%), Positives = 53/76 (69%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD +R
Sbjct: 64 RAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIR 123
Query: 437 KEAESCDCLQGFQLTH 484
+ A++C LQGF + H
Sbjct: 124 RLADNCTGLQGFLVFH 139
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 248
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 249 YV 254
+V
Sbjct: 61 HV 62
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 85.4 bits (202), Expect = 3e-17
Identities = 34/76 (44%), Positives = 53/76 (69%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD +R
Sbjct: 64 RAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIR 123
Query: 437 KEAESCDCLQGFQLTH 484
+ A++C LQGF + H
Sbjct: 124 RLADNCTGLQGFLVFH 139
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 248
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 249 YV 254
+V
Sbjct: 61 HV 62
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 85.0 bits (201), Expect = 3e-17
Identities = 34/76 (44%), Positives = 54/76 (71%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
R+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+ LD +R
Sbjct: 61 RSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIR 120
Query: 437 KEAESCDCLQGFQLTH 484
+ A +C+ LQGF + H
Sbjct: 121 RLANNCEGLQGFFVFH 136
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +3
Query: 75 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 254
MRE++ I GQ G QIG WE+ EHGI P G + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGT-SMEPDGNSGSLGTFFSDTGYGRHV 59
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 84.6 bits (200), Expect = 4e-17
Identities = 36/76 (47%), Positives = 53/76 (69%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
RAI+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V+D VR
Sbjct: 69 RAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVR 128
Query: 437 KEAESCDCLQGFQLTH 484
+ E+C LQGF + H
Sbjct: 129 RLVENCRGLQGFLVFH 144
Score = 51.6 bits (118), Expect = 4e-07
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +3
Query: 69 NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASG 242
N+ RE++ I GQ G Q+G WE+ EHGI P G + + L + + N +++E
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 243 GKYV 254
GK+V
Sbjct: 64 GKHV 67
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 77.8 bits (183), Expect = 5e-15
Identities = 33/76 (43%), Positives = 51/76 (67%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
R + VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D V+
Sbjct: 70 RCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVK 129
Query: 437 KEAESCDCLQGFQLTH 484
+ AE+C+ LQGF + H
Sbjct: 130 RLAENCNGLQGFVIFH 145
Score = 57.2 bits (132), Expect = 8e-09
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Frame = +3
Query: 78 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGK 248
RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GGK
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 249 YV 254
+V
Sbjct: 67 HV 68
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 77.8 bits (183), Expect = 5e-15
Identities = 33/76 (43%), Positives = 51/76 (67%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 436
R + VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D V+
Sbjct: 42 RCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVK 101
Query: 437 KEAESCDCLQGFQLTH 484
+ AE+C+ LQGF + H
Sbjct: 102 RLAENCNGLQGFVIFH 117
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLD 427
RA+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D
Sbjct: 64 RAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMD 122
Query: 428 VVRKEAESCDCLQGFQLTH 484
++ +EAE+ + L G TH
Sbjct: 123 IIIREAENTNNLDGILFTH 141
Score = 44.4 bits (100), Expect = 6e-05
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +3
Query: 84 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 254
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YV
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYV 62
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = +2
Query: 257 RAILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLD 427
RA+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D
Sbjct: 64 RAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMD 122
Query: 428 VVRKEAESCDCLQGFQLTH 484
++ +EAE+ + L G TH
Sbjct: 123 IIIREAENTNNLDGILFTH 141
Score = 44.4 bits (100), Expect = 6e-05
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +3
Query: 84 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 254
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YV
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYV 62
>AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical
protein C09G12.9 protein.
Length = 425
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/72 (26%), Positives = 27/72 (37%)
Frame = -2
Query: 488 ASVSVGIPGGNHTIPLPFERRLKLNRRAQHPPCSVPWPSCYXXXXXXXRSCPDGRSVRKV 309
+S P T+P P+ + A +PP S P+PS + P
Sbjct: 165 SSTPTPYPSSQPTMPTPYPTG---SGAAPYPPSSTPYPSAGAMGYNPYMNVPQSTPYPMG 221
Query: 308 QSGQSPWCRAPS 273
SG SP+ A S
Sbjct: 222 ASGASPYPSASS 233
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -1
Query: 456 SHDSASFRTTSKTESTSSAPSV*CPLAQLLPAPDCP 349
S A R + + S SS+PS CP LLP P CP
Sbjct: 294 SDGRAGSRISLASTSASSSPSDPCPSPPLLP-PVCP 328
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,063,298
Number of Sequences: 27780
Number of extensions: 238142
Number of successful extensions: 803
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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