Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060379.seq
(571 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20298-1|AAA02868.1| 175|Homo sapiens transcription factor prot... 89 1e-17
BT006862-1|AAP35508.1| 182|Homo sapiens core-binding factor, be... 89 1e-17
BC018509-1|AAH18509.1| 182|Homo sapiens core-binding factor, be... 89 1e-17
AF294326-1|AAG01553.1| 187|Homo sapiens core binding factor bet... 89 1e-17
Y17001-1|CAA76575.1| 92|Homo sapiens human leukocyte antigen H... 30 6.6
X00492-1|CAA25162.1| 354|Homo sapiens protein ( Human gene for ... 30 6.6
U32184-1|AAB63980.1| 365|Homo sapiens MHC class I HLA-A protein. 30 6.6
M20179-1|AAA59839.1| 89|Homo sapiens HLA-A protein. 30 6.6
L77702-1|AAA98118.1| 363|Homo sapiens MHC class I antigen protein. 30 6.6
EF602747-1|ABQ96854.1| 181|Homo sapiens MHC class I antigen pro... 30 6.6
EF484942-1|ABO87667.1| 181|Homo sapiens MHC class I antigen pro... 30 6.6
EF158451-1|ABL98210.1| 365|Homo sapiens MHC class I antigen pro... 30 6.6
DQ987874-1|ABJ90453.1| 181|Homo sapiens MHC class I antigen pro... 30 6.6
DQ465612-1|ABF58776.1| 181|Homo sapiens MHC class I antigen pro... 30 6.6
DQ403157-1|ABD64774.1| 181|Homo sapiens MHC class I antigen pro... 30 6.6
DQ139313-1|AAZ66805.1| 181|Homo sapiens MHC class I antigen pro... 30 6.6
BA000025-101|BAB63400.1| 365|Homo sapiens HLA-A protein. 30 6.6
AY754873-1|AAV28628.1| 181|Homo sapiens MHC class I antigen pro... 30 6.6
AY619990-1|AAT41623.1| 299|Homo sapiens MHC class I antigen pre... 30 6.6
AY368498-1|AAQ72558.1| 181|Homo sapiens MHC class I antigen pro... 30 6.6
AY354906-1|AAR28200.1| 181|Homo sapiens MHC class I antigen pro... 30 6.6
AY310505-1|AAP74975.1| 318|Homo sapiens MHC class I antigen pro... 30 6.6
AY160990-1|AAN64244.1| 181|Homo sapiens MHC class I antigen pro... 30 6.6
AM778555-1|CAO85934.1| 181|Homo sapiens MHC class I antigen pro... 30 6.6
AM778452-1|CAO85756.1| 181|Homo sapiens MHC class I antigen pro... 30 6.6
AM774358-1|CAO82008.1| 337|Homo sapiens MHC class I antigen pro... 30 6.6
AM746339-1|CAN89177.1| 298|Homo sapiens MHC class I antigen pro... 30 6.6
AM493250-1|CAM34676.1| 181|Homo sapiens MHC class I antigen pro... 30 6.6
AM413001-1|CAL85627.1| 264|Homo sapiens MHC class I antigen pro... 30 6.6
AM407885-1|CAL59517.1| 181|Homo sapiens MHC class I antigen pro... 30 6.6
AM261460-1|CAK02800.1| 181|Homo sapiens MHC class I antigen pro... 30 6.6
AM087469-1|CAJ32464.1| 219|Homo sapiens MHC class I antigen pro... 30 6.6
AM056023-1|CAJ20746.1| 273|Homo sapiens MHC class I antigen pro... 30 6.6
AM041068-1|CAJ14959.1| 294|Homo sapiens truncated MHC class I a... 30 6.6
AM041067-1|CAJ14958.1| 294|Homo sapiens truncated MHC class I a... 30 6.6
AL671277-7|CAI18371.2| 299|Homo sapiens major histocompatibilit... 30 6.6
AL671277-6|CAI18373.2| 371|Homo sapiens major histocompatibilit... 30 6.6
AL671277-5|CAI18372.1| 365|Homo sapiens major histocompatibilit... 30 6.6
AJ876374-1|CAI45286.1| 181|Homo sapiens MHC class I antigen pro... 30 6.6
AJ748743-1|CAG38621.1| 365|Homo sapiens MHC class I antigen pro... 30 6.6
AJ532608-1|CAD58884.1| 319|Homo sapiens MHC class I antigen pro... 30 6.6
AJ006020-1|CAA06807.1| 200|Homo sapiens HLA-A*24var protein. 30 6.6
AF372050-1|AAK52517.1| 181|Homo sapiens MHC class I antigen pro... 30 6.6
AF288048-1|AAG02092.1| 181|Homo sapiens MHC class I antigen pro... 30 6.6
AF268400-1|AAK58590.1| 181|Homo sapiens MHC class I antigen pro... 30 6.6
AF146366-1|AAF66709.1| 181|Homo sapiens MHC class I antigen pro... 30 6.6
AF140858-1|AAD34884.1| 181|Homo sapiens MHC class I antigen pro... 30 6.6
AF140856-1|AAD34883.1| 181|Homo sapiens MHC class I antigen pro... 30 6.6
AF139892-1|AAD33849.1| 181|Homo sapiens MHC class I antigen pro... 30 6.6
AF137078-1|AAD33738.1| 181|Homo sapiens MHC class I antigen pro... 30 6.6
AF065402-1|AAC17178.1| 181|Homo sapiens MHC class I antigen pro... 30 6.6
AF053129-1|AAC06320.1| 181|Homo sapiens MHC class I antigen pro... 30 6.6
AF015930-1|AAB66582.1| 341|Homo sapiens MHC class I antigen HLA... 30 6.6
AB179716-1|BAD19045.1| 273|Homo sapiens MHC class I antigen pro... 30 6.6
DQ205716-1|ABB00706.1| 181|Homo sapiens MHC class I antigen pro... 29 8.7
DQ089702-1|AAZ40332.1| 181|Homo sapiens MHC class I antigen pro... 29 8.7
AY856830-1|AAX51797.1| 365|Homo sapiens MHC class I antigen pro... 29 8.7
AM779474-1|CAO91743.1| 273|Homo sapiens MHC class I antigen pro... 29 8.7
AJ401086-1|CAC06087.1| 91|Homo sapiens human leucocyte antigen... 29 8.7
AJ252285-1|CAB65738.1| 91|Homo sapiens human leucocyte antigen... 29 8.7
AF198353-1|AAF23125.1| 181|Homo sapiens MHC class I antigen pro... 29 8.7
AF190719-1|AAF03243.1| 181|Homo sapiens MHC class I antigen pro... 29 8.7
AF188606-1|AAF05535.1| 181|Homo sapiens MHC class I antigen pro... 29 8.7
AF173878-1|AAD48507.1| 181|Homo sapiens MHC class I antigen pro... 29 8.7
AF173874-1|AAD48505.2| 181|Homo sapiens MHC class I antigen pro... 29 8.7
AF145777-1|AAD38682.1| 181|Homo sapiens MHC class I antigen pro... 29 8.7
AF145773-1|AAD38680.1| 181|Homo sapiens MHC class I antigen pro... 29 8.7
AF135547-1|AAD22271.1| 181|Homo sapiens MHC class I antigen pro... 29 8.7
>L20298-1|AAA02868.1| 175|Homo sapiens transcription factor
protein.
Length = 175
Score = 88.6 bits (210), Expect = 1e-17
Identities = 36/60 (60%), Positives = 49/60 (81%)
Frame = +3
Query: 252 KAKFESDDLFKRLSRESEVRYTGYRDRPPEERQMRFMSGCREGHTEIAFTGTGTNLQLVF 431
++KFE+++ F++LSRE E++YTG+RDRP EERQ RF + CR+G +EIAF TGTNL L F
Sbjct: 2 RSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEIAFVATGTNLSLQF 61
Score = 46.8 bits (106), Expect = 5e-05
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +2
Query: 494 RIPIHMNGVCVRWRGWIDLERLDGAG 571
+ P+ +NGVCV W+GWIDL+RLDG G
Sbjct: 91 KAPMILNGVCVIWKGWIDLQRLDGMG 116
>BT006862-1|AAP35508.1| 182|Homo sapiens core-binding factor, beta
subunit protein.
Length = 182
Score = 88.6 bits (210), Expect = 1e-17
Identities = 36/60 (60%), Positives = 49/60 (81%)
Frame = +3
Query: 252 KAKFESDDLFKRLSRESEVRYTGYRDRPPEERQMRFMSGCREGHTEIAFTGTGTNLQLVF 431
++KFE+++ F++LSRE E++YTG+RDRP EERQ RF + CR+G +EIAF TGTNL L F
Sbjct: 9 RSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEIAFVATGTNLSLQF 68
Score = 46.8 bits (106), Expect = 5e-05
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +2
Query: 494 RIPIHMNGVCVRWRGWIDLERLDGAG 571
+ P+ +NGVCV W+GWIDL+RLDG G
Sbjct: 98 KAPMILNGVCVIWKGWIDLQRLDGMG 123
>BC018509-1|AAH18509.1| 182|Homo sapiens core-binding factor, beta
subunit protein.
Length = 182
Score = 88.6 bits (210), Expect = 1e-17
Identities = 36/60 (60%), Positives = 49/60 (81%)
Frame = +3
Query: 252 KAKFESDDLFKRLSRESEVRYTGYRDRPPEERQMRFMSGCREGHTEIAFTGTGTNLQLVF 431
++KFE+++ F++LSRE E++YTG+RDRP EERQ RF + CR+G +EIAF TGTNL L F
Sbjct: 9 RSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEIAFVATGTNLSLQF 68
Score = 46.8 bits (106), Expect = 5e-05
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +2
Query: 494 RIPIHMNGVCVRWRGWIDLERLDGAG 571
+ P+ +NGVCV W+GWIDL+RLDG G
Sbjct: 98 KAPMILNGVCVIWKGWIDLQRLDGMG 123
>AF294326-1|AAG01553.1| 187|Homo sapiens core binding factor beta
isoform PEBP2B protein.
Length = 187
Score = 88.6 bits (210), Expect = 1e-17
Identities = 36/60 (60%), Positives = 49/60 (81%)
Frame = +3
Query: 252 KAKFESDDLFKRLSRESEVRYTGYRDRPPEERQMRFMSGCREGHTEIAFTGTGTNLQLVF 431
++KFE+++ F++LSRE E++YTG+RDRP EERQ RF + CR+G +EIAF TGTNL L F
Sbjct: 9 RSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEIAFVATGTNLSLQF 68
Score = 46.8 bits (106), Expect = 5e-05
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +2
Query: 494 RIPIHMNGVCVRWRGWIDLERLDGAG 571
+ P+ +NGVCV W+GWIDL+RLDG G
Sbjct: 98 KAPMILNGVCVIWKGWIDLQRLDGMG 123
>Y17001-1|CAA76575.1| 92|Homo sapiens human leukocyte antigen
HLA-A*03NJ protein.
Length = 92
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 40 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 77
>X00492-1|CAA25162.1| 354|Homo sapiens protein ( Human gene for
histocompatibility antigen HLA-A3. ).
Length = 354
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 159 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 196
>U32184-1|AAB63980.1| 365|Homo sapiens MHC class I HLA-A protein.
Length = 365
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 154 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 191
>M20179-1|AAA59839.1| 89|Homo sapiens HLA-A protein.
Length = 89
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 37 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 74
>L77702-1|AAA98118.1| 363|Homo sapiens MHC class I antigen protein.
Length = 363
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 152 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 189
>EF602747-1|ABQ96854.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>EF484942-1|ABO87667.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>EF158451-1|ABL98210.1| 365|Homo sapiens MHC class I antigen
protein.
Length = 365
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 154 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 191
>DQ987874-1|ABJ90453.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>DQ465612-1|ABF58776.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>DQ403157-1|ABD64774.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>DQ139313-1|AAZ66805.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>BA000025-101|BAB63400.1| 365|Homo sapiens HLA-A protein.
Length = 365
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 154 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 191
>AY754873-1|AAV28628.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>AY619990-1|AAT41623.1| 299|Homo sapiens MHC class I antigen
precusor protein.
Length = 299
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 154 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 191
>AY368498-1|AAQ72558.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>AY354906-1|AAR28200.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>AY310505-1|AAP74975.1| 318|Homo sapiens MHC class I antigen
protein.
Length = 318
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 150 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 187
>AY160990-1|AAN64244.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>AM778555-1|CAO85934.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>AM778452-1|CAO85756.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>AM774358-1|CAO82008.1| 337|Homo sapiens MHC class I antigen
protein.
Length = 337
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 154 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 191
>AM746339-1|CAN89177.1| 298|Homo sapiens MHC class I antigen
protein.
Length = 298
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 154 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 191
>AM493250-1|CAM34676.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>AM413001-1|CAL85627.1| 264|Homo sapiens MHC class I antigen
protein.
Length = 264
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 120 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 157
>AM407885-1|CAL59517.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>AM261460-1|CAK02800.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>AM087469-1|CAJ32464.1| 219|Homo sapiens MHC class I antigen
protein.
Length = 219
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 154 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 191
>AM056023-1|CAJ20746.1| 273|Homo sapiens MHC class I antigen
protein.
Length = 273
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>AM041068-1|CAJ14959.1| 294|Homo sapiens truncated MHC class I
antigen protein.
Length = 294
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>AM041067-1|CAJ14958.1| 294|Homo sapiens truncated MHC class I
antigen protein.
Length = 294
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>AL671277-7|CAI18371.2| 299|Homo sapiens major histocompatibility
complex, class I, A protein.
Length = 299
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 154 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 191
>AL671277-6|CAI18373.2| 371|Homo sapiens major histocompatibility
complex, class I, A protein.
Length = 371
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 154 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 191
>AL671277-5|CAI18372.1| 365|Homo sapiens major histocompatibility
complex, class I, A protein.
Length = 365
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 154 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 191
>AJ876374-1|CAI45286.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>AJ748743-1|CAG38621.1| 365|Homo sapiens MHC class I antigen
protein.
Length = 365
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 154 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 191
>AJ532608-1|CAD58884.1| 319|Homo sapiens MHC class I antigen
protein.
Length = 319
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 154 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 191
>AJ006020-1|CAA06807.1| 200|Homo sapiens HLA-A*24var protein.
Length = 200
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 154 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 191
>AF372050-1|AAK52517.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>AF288048-1|AAG02092.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>AF268400-1|AAK58590.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHVAEQLRAYLDGTCVEW 166
>AF146366-1|AAF66709.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>AF140858-1|AAD34884.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>AF140856-1|AAD34883.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>AF139892-1|AAD33849.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>AF137078-1|AAD33738.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>AF065402-1|AAC17178.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>AF053129-1|AAC06320.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>AF015930-1|AAB66582.1| 341|Homo sapiens MHC class I antigen HLA-A
protein.
Length = 341
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 154 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEW 191
>AB179716-1|BAD19045.1| 273|Homo sapiens MHC class I antigen
protein.
Length = 273
Score = 29.9 bits (64), Expect = 6.6
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T R +K KW+++H ++ ++ G CV W
Sbjct: 129 LRSWTAADMAARTTKHKWEAAHVAEQLRAYLEGTCVEW 166
>DQ205716-1|ABB00706.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.5 bits (63), Expect = 8.7
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ ++ G CV W
Sbjct: 129 LRSWTAADMAAQITKHKWEAAHVAEQLRAYLEGTCVEW 166
>DQ089702-1|AAZ40332.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.5 bits (63), Expect = 8.7
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ ++ G CV W
Sbjct: 129 LRSWTAADMAAQITKHKWEAAHVAEQLRAYLEGTCVEW 166
>AY856830-1|AAX51797.1| 365|Homo sapiens MHC class I antigen
protein.
Length = 365
Score = 29.5 bits (63), Expect = 8.7
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ ++ G CV W
Sbjct: 154 LRSWTAADMAAQITKHKWEAAHVAEQLRAYLEGTCVEW 191
>AM779474-1|CAO91743.1| 273|Homo sapiens MHC class I antigen
protein.
Length = 273
Score = 29.5 bits (63), Expect = 8.7
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ +++G CV W
Sbjct: 129 LRSWTAADMPAQITKRKWEAAHEAEQLRAYLDGTCVEW 166
>AJ401086-1|CAC06087.1| 91|Homo sapiens human leucocyte antigen A
protein.
Length = 91
Score = 29.5 bits (63), Expect = 8.7
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ ++ G CV W
Sbjct: 39 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLEGTCVEW 76
>AJ252285-1|CAB65738.1| 91|Homo sapiens human leucocyte antigen B
protein.
Length = 91
Score = 29.5 bits (63), Expect = 8.7
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ ++ G CV W
Sbjct: 39 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLEGTCVEW 76
>AF198353-1|AAF23125.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.5 bits (63), Expect = 8.7
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ ++ G CV W
Sbjct: 129 LRSWTAADMAAQITKHKWEAAHVAEQLRAYLEGTCVEW 166
>AF190719-1|AAF03243.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.5 bits (63), Expect = 8.7
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ ++ G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLEGTCVEW 166
>AF188606-1|AAF05535.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.5 bits (63), Expect = 8.7
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ ++ G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLEGTCVEW 166
>AF173878-1|AAD48507.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.5 bits (63), Expect = 8.7
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ ++ G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLEGTCVEW 166
>AF173874-1|AAD48505.2| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.5 bits (63), Expect = 8.7
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ ++ G CV W
Sbjct: 129 LRSWTAADMAAQITKHKWEAAHVAEQLRAYLEGTCVEW 166
>AF145777-1|AAD38682.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.5 bits (63), Expect = 8.7
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ ++ G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLEGTCVEW 166
>AF145773-1|AAD38680.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.5 bits (63), Expect = 8.7
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ ++ G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLEGTCVEW 166
>AF135547-1|AAD22271.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.5 bits (63), Expect = 8.7
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 428 LRSLTLQQPRLRLSKGKWKSSH---RIPIHMNGVCVRW 532
LRS T +++K KW+++H ++ ++ G CV W
Sbjct: 129 LRSWTAADMAAQITKRKWEAAHEAEQLRAYLEGTCVEW 166
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,427,897
Number of Sequences: 237096
Number of extensions: 1660541
Number of successful extensions: 8273
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 8142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8273
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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