Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060377.seq
         (571 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    24   0.79 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    24   0.79 
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   1.8  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    23   2.4  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   2.4  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    21   7.4  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   9.8  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 24.2 bits (50), Expect = 0.79
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 310 YGIEVRHSYYSWSSLIGHLV 251
           Y I VRH+YY     I HLV
Sbjct: 60  YSIYVRHTYYRRLYTITHLV 79


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 24.2 bits (50), Expect = 0.79
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 310 YGIEVRHSYYSWSSLIGHLV 251
           Y I VRH+YY     I HLV
Sbjct: 60  YSIYVRHTYYRRLYTITHLV 79


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 407 QAISQAFTREYGRDLIEDLKSELGGHFEDVIVAL 508
           Q   Q F  E  R L+EDL++E    + DV+V +
Sbjct: 140 QEFIQIFNEETKR-LVEDLEAECHKPYIDVVVPI 172


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = -1

Query: 550 NGAAPGTGTPQGESQSHDYIFEVTTQFRLQVFNEISSILSCEGL*YGL 407
           NG A     P+  +++ DYI  V    R Q+   ISS   CE L YG+
Sbjct: 56  NGLAFDASDPKFLTENCDYIHNVDCGDRTQLEPPISS-PHCERL-YGI 101


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = -1

Query: 550 NGAAPGTGTPQGESQSHDYIFEVTTQFRLQVFNEISSILSCEGL*YGL 407
           NG A     P+  +++ DYI  V    R Q+   ISS   CE L YG+
Sbjct: 56  NGLAFDASDPKFLTENCDYIHNVDCGDRTQLEPPISS-PHCERL-YGI 101


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative
          cytochrome P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 57 LDKIYLTKRCTKTTTFLVP 1
          L ++  TKRC K T  L P
Sbjct: 41 LQELKYTKRCIKETLRLFP 59


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 189 ISNLVTLYDCCRKNNLFLLMLY 124
           I NLV +Y C    N+FL  ++
Sbjct: 154 IFNLVYVYCCDNNFNVFLRQVF 175


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,632
Number of Sequences: 336
Number of extensions: 3130
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)