Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060376.seq
(563 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC112391-1|AAI12392.1| 957|Homo sapiens ELKS/RAB6-interacting/C... 31 2.1
BC111550-1|AAI11551.1| 957|Homo sapiens ERC2 protein protein. 31 2.1
AB002376-1|BAA20832.2| 970|Homo sapiens KIAA0378 protein. 31 2.1
X06181-1|CAA29547.1| 431|Homo sapiens P-glycoprotein (431 AA) p... 31 2.8
M23234-1|AAA36207.1| 1279|Homo sapiens protein ( Human membrane ... 31 2.8
EF034088-1|ABJ53424.1| 1286|Homo sapiens ATP-binding cassette, s... 31 2.8
BC042531-1|AAH42531.1| 1286|Homo sapiens ATP-binding cassette, s... 31 2.8
BC028725-1|AAH28725.3| 334|Homo sapiens ELMO/CED-12 domain cont... 31 3.7
CR541959-1|CAG46757.1| 168|Homo sapiens BAD protein. 29 8.5
CR541935-1|CAG46733.1| 168|Homo sapiens BAD protein. 29 8.5
BT006678-1|AAP35324.1| 168|Homo sapiens BCL2-antagonist of cell... 29 8.5
BC095431-1|AAH95431.1| 168|Homo sapiens BCL2-antagonist of cell... 29 8.5
BC001901-1|AAH01901.1| 168|Homo sapiens BCL2-antagonist of cell... 29 8.5
AF031523-1|AAB88124.1| 168|Homo sapiens bcl-xL/bcl-2 associated... 29 8.5
AF021792-1|AAB72092.1| 168|Homo sapiens Bcl-X/Bcl-2 binding pro... 29 8.5
>BC112391-1|AAI12392.1| 957|Homo sapiens ELKS/RAB6-interacting/CAST
family member 2 protein.
Length = 957
Score = 31.5 bits (68), Expect = 2.1
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +2
Query: 11 GHTTASSHGQSPTEQTGTXIGDHSHTWASITSGPIKLPPAEAPRSTTWPSSHVSL 175
GH SS G T +T + S A TSGP+ L E STT+P ++L
Sbjct: 28 GHRRTSSGGGGGTGKTLSMENIQSLNAAYATSGPMYLSDHEGVASTTYPKGTMTL 82
>BC111550-1|AAI11551.1| 957|Homo sapiens ERC2 protein protein.
Length = 957
Score = 31.5 bits (68), Expect = 2.1
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +2
Query: 11 GHTTASSHGQSPTEQTGTXIGDHSHTWASITSGPIKLPPAEAPRSTTWPSSHVSL 175
GH SS G T +T + S A TSGP+ L E STT+P ++L
Sbjct: 28 GHRRTSSGGGGGTGKTLSMENIQSLNAAYATSGPMYLSDHEGVASTTYPKGTMTL 82
>AB002376-1|BAA20832.2| 970|Homo sapiens KIAA0378 protein.
Length = 970
Score = 31.5 bits (68), Expect = 2.1
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +2
Query: 11 GHTTASSHGQSPTEQTGTXIGDHSHTWASITSGPIKLPPAEAPRSTTWPSSHVSL 175
GH SS G T +T + S A TSGP+ L E STT+P ++L
Sbjct: 41 GHRRTSSGGGGGTGKTLSMENIQSLNAAYATSGPMYLSDHEGVASTTYPKGTMTL 95
>X06181-1|CAA29547.1| 431|Homo sapiens P-glycoprotein (431 AA)
protein.
Length = 431
Score = 31.1 bits (67), Expect = 2.8
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 79 FTYVGLDYFGPYQVTTGRSTQKHYVAIFTCLTTRAVHLEPAASLSTDSA 225
F+Y G FG Y + G + + +F+ + AV L A+S + D A
Sbjct: 95 FSYAGCFRFGAYLIVNGHMRFRDVILVFSAIVFGAVALGHASSFAPDYA 143
>M23234-1|AAA36207.1| 1279|Homo sapiens protein ( Human membrane
glycoprotein P (mdr3) mRNA, complete cds. ).
Length = 1279
Score = 31.1 bits (67), Expect = 2.8
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 79 FTYVGLDYFGPYQVTTGRSTQKHYVAIFTCLTTRAVHLEPAASLSTDSA 225
F+Y G FG Y + G + + +F+ + AV L A+S + D A
Sbjct: 950 FSYAGCFRFGAYLIVNGHMRFRDVILVFSAIVFGAVALGHASSFAPDYA 998
>EF034088-1|ABJ53424.1| 1286|Homo sapiens ATP-binding cassette,
sub-family B (MDR/TAP), member 4 protein.
Length = 1286
Score = 31.1 bits (67), Expect = 2.8
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 79 FTYVGLDYFGPYQVTTGRSTQKHYVAIFTCLTTRAVHLEPAASLSTDSA 225
F+Y G FG Y + G + + +F+ + AV L A+S + D A
Sbjct: 950 FSYAGCFRFGAYLIVNGHMRFRDVILVFSAIVFGAVALGHASSFAPDYA 998
>BC042531-1|AAH42531.1| 1286|Homo sapiens ATP-binding cassette,
sub-family B (MDR/TAP), member 4 protein.
Length = 1286
Score = 31.1 bits (67), Expect = 2.8
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 79 FTYVGLDYFGPYQVTTGRSTQKHYVAIFTCLTTRAVHLEPAASLSTDSA 225
F+Y G FG Y + G + + +F+ + AV L A+S + D A
Sbjct: 950 FSYAGCFRFGAYLIVNGHMRFRDVILVFSAIVFGAVALGHASSFAPDYA 998
>BC028725-1|AAH28725.3| 334|Homo sapiens ELMO/CED-12 domain
containing 1 protein.
Length = 334
Score = 30.7 bits (66), Expect = 3.7
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +3
Query: 309 DKELRQALDKATEHEASLKLIQWRFIPPGAPFMGGAGREWC 431
+K R+A D + L W+F+ P P ++WC
Sbjct: 120 EKLRREAYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWC 160
>CR541959-1|CAG46757.1| 168|Homo sapiens BAD protein.
Length = 168
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +3
Query: 186 TFRTGSEPQHGLSSDGTPAHDRARGAPTEIWSDN--GTNLRGADKELRQALDK 338
++ G+E G+ + +P R+R AP +W+ G LR E + K
Sbjct: 75 SYPAGTEDDEGMGEEPSPFRGRSRSAPPNLWAAQRYGRELRRMSDEFVDSFKK 127
>CR541935-1|CAG46733.1| 168|Homo sapiens BAD protein.
Length = 168
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +3
Query: 186 TFRTGSEPQHGLSSDGTPAHDRARGAPTEIWSDN--GTNLRGADKELRQALDK 338
++ G+E G+ + +P R+R AP +W+ G LR E + K
Sbjct: 75 SYPAGTEDDEGMGEEPSPFRGRSRSAPPNLWAAQRYGRELRRMSDEFVDSFKK 127
>BT006678-1|AAP35324.1| 168|Homo sapiens BCL2-antagonist of cell
death protein.
Length = 168
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +3
Query: 186 TFRTGSEPQHGLSSDGTPAHDRARGAPTEIWSDN--GTNLRGADKELRQALDK 338
++ G+E G+ + +P R+R AP +W+ G LR E + K
Sbjct: 75 SYPAGTEDDEGMGEEPSPFRGRSRSAPPNLWAAQRYGRELRRMSDEFVDSFKK 127
>BC095431-1|AAH95431.1| 168|Homo sapiens BCL2-antagonist of cell
death protein.
Length = 168
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +3
Query: 186 TFRTGSEPQHGLSSDGTPAHDRARGAPTEIWSDN--GTNLRGADKELRQALDK 338
++ G+E G+ + +P R+R AP +W+ G LR E + K
Sbjct: 75 SYPAGTEDDEGMGEEPSPFRGRSRSAPPNLWAAQRYGRELRRMSDEFVDSFKK 127
>BC001901-1|AAH01901.1| 168|Homo sapiens BCL2-antagonist of cell
death protein.
Length = 168
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +3
Query: 186 TFRTGSEPQHGLSSDGTPAHDRARGAPTEIWSDN--GTNLRGADKELRQALDK 338
++ G+E G+ + +P R+R AP +W+ G LR E + K
Sbjct: 75 SYPAGTEDDEGMGEEPSPFRGRSRSAPPNLWAAQRYGRELRRMSDEFVDSFKK 127
>AF031523-1|AAB88124.1| 168|Homo sapiens bcl-xL/bcl-2 associated
death promoter protein.
Length = 168
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +3
Query: 186 TFRTGSEPQHGLSSDGTPAHDRARGAPTEIWSDN--GTNLRGADKELRQALDK 338
++ G+E G+ + +P R+R AP +W+ G LR E + K
Sbjct: 75 SYPAGTEDDEGMGEEPSPFRGRSRSAPPNLWAAQRYGRELRRMSDEFVDSFKK 127
>AF021792-1|AAB72092.1| 168|Homo sapiens Bcl-X/Bcl-2 binding
protein protein.
Length = 168
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +3
Query: 186 TFRTGSEPQHGLSSDGTPAHDRARGAPTEIWSDN--GTNLRGADKELRQALDK 338
++ G+E G+ + +P R+R AP +W+ G LR E + K
Sbjct: 75 SYPAGTEDDEGMGEEPSPFRGRSRSAPPNLWAAQRYGRELRRMSDEFVDSFKK 127
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,910,766
Number of Sequences: 237096
Number of extensions: 1941144
Number of successful extensions: 7631
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7625
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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