Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060375.seq
         (529 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    29   0.033
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   2.2  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   2.2  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   3.8  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   5.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.7  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 28.7 bits (61), Expect = 0.033
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = +3

Query: 183 DHSVLCCVHRHRASHRRCRQEPGGMNPNNTIFDAKRLI--GRKFEDATVQADMKHWPFEV 356
           DH  +  +H +  SH   +QEP G   +N  F   RL+       D  + ADM  + +  
Sbjct: 342 DHQAM--LHHNPMSHH-LKQEPSGFTSSNHPFSINRLLPTAESKADIKMYADMHQYGYNT 398

Query: 357 VS 362
           +S
Sbjct: 399 LS 400


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 135 LPAREGGDHRQRPGQQDH 188
           +P R+  DHR RP +  H
Sbjct: 246 IPIRQCDDHRDRPPRHFH 263


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -1

Query: 502 LHSAQFCRDKLRQFSFIFVSTMEL 431
           L +A FCRD++  + F +  ++ L
Sbjct: 108 LSNAVFCRDRVNPYLFYYAFSVAL 131


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 233 MPPRTRWHEPQQH 271
           MP  T WH P+ H
Sbjct: 65  MPGVTHWHSPRFH 77


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 512 NLITAFCTVLPR*AXAVFLHF 450
           +LITAF +VLP+ A  +   F
Sbjct: 86  DLITAFLSVLPQLAWDITYRF 106


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 134 TPTQEYVVPRSIPT 93
           TPT + VV R+IP+
Sbjct: 15  TPTDQRVVTRTIPS 28


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,935
Number of Sequences: 336
Number of extensions: 2977
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)