Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060375.seq
(529 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 124 1e-29
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 120 1e-28
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 111 8e-26
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 108 6e-25
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 82 4e-17
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 49 4e-07
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 40 3e-04
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 29 0.32
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.57
SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces pombe... 26 3.0
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 26 4.0
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp... 25 5.3
SPBC839.02 |||arrestin Aly1 related|Schizosaccharomyces pombe|ch... 25 7.0
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 7.0
SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting pr... 25 9.2
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 25 9.2
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 25 9.2
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 124 bits (298), Expect = 1e-29
Identities = 56/91 (61%), Positives = 67/91 (73%)
Frame = +3
Query: 255 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGXPKIKVAYKGEDKTFFPEEVS 434
MNP+NTIFDAKRLIGRKF+D VQ+DMKHWPF+V+S G P ++V YKGE KTF PEE+S
Sbjct: 59 MNPHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEIS 118
Query: 435 SMVLTKMKENCRSLSRQNCAECSYQVPAYFN 527
SMVL KM+E + + VPAYFN
Sbjct: 119 SMVLMKMRETAEAYLGGKVTDAVVTVPAYFN 149
Score = 115 bits (277), Expect = 4e-27
Identities = 75/153 (49%), Positives = 89/153 (58%), Gaps = 11/153 (7%)
Frame = +1
Query: 91 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA*TPTT 270
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA P
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 271 -----------QYSMPNVSSDVSSKMLLCKPT*STGLSRLSVMEAXLRSR*HIRVKTKPF 417
++ P V SD+ K K G L V + +TK F
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDM--KHWPFKVISKDGKPVLQV---------EYKGETKTF 112
Query: 418 SPRKSVPWCLRK*RKTAXAYLGKTVQNAVIRFP 516
+P + L K R+TA AYLG V +AV+ P
Sbjct: 113 TPEEISSMVLMKMRETAEAYLGGKVTDAVVTVP 145
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 120 bits (289), Expect = 1e-28
Identities = 54/91 (59%), Positives = 66/91 (72%)
Frame = +3
Query: 255 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGXPKIKVAYKGEDKTFFPEEVS 434
MNP+NTIFDAKRLIGR+F D VQ+DMKHWPF+V+ G P I+V +KGE KTF PEE+S
Sbjct: 59 MNPHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEIS 118
Query: 435 SMVLTKMKENCRSLSRQNCAECSYQVPAYFN 527
SMVL KM+E+ + + VPAYFN
Sbjct: 119 SMVLLKMRESAEAFLGGKVTDAVVTVPAYFN 149
Score = 112 bits (269), Expect = 4e-26
Identities = 72/153 (47%), Positives = 90/153 (58%), Gaps = 11/153 (7%)
Frame = +1
Query: 91 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA*TPTT 270
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA P
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 271 -----------QYSMPNVSSDVSSKMLLCKPT*STGLSRLSVMEAXLRSR*HIRVKTKPF 417
+++ P V SD+ K K G + V + +TK F
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDM--KHWPFKVIEKDGKPLIQV---------EFKGETKTF 112
Query: 418 SPRKSVPWCLRK*RKTAXAYLGKTVQNAVIRFP 516
+P + L K R++A A+LG V +AV+ P
Sbjct: 113 TPEEISSMVLLKMRESAEAFLGGKVTDAVVTVP 145
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 111 bits (266), Expect = 8e-26
Identities = 63/142 (44%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Frame = +1
Query: 94 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA*TP-TT 270
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ P T
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 271 QYSMPNVSSDVSSKMLLCKPT*STGLSRLSVMEAXLRSR*HIRVKTKPFSPRKSVPWCLR 450
+ + + + + K S ++ L ++ K K F+P + L
Sbjct: 98 IFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPL-VEVNVGGKKKKFTPEEISAMILS 156
Query: 451 K*RKTAXAYLGKTVQNAVIRFP 516
K ++TA AYLGK V +AV+ P
Sbjct: 157 KMKQTAEAYLGKPVTHAVVTVP 178
Score = 93.9 bits (223), Expect = 1e-20
Identities = 42/90 (46%), Positives = 59/90 (65%)
Frame = +3
Query: 258 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGXPKIKVAYKGEDKTFFPEEVSS 437
NP NTIFD KRLIGRKF++ T+ D+K +PF +V+D P ++V G+ K F PEE+S+
Sbjct: 93 NPENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISA 152
Query: 438 MVLTKMKENCRSLSRQNCAECSYQVPAYFN 527
M+L+KMK+ + + VPAYFN
Sbjct: 153 MILSKMKQTAEAYLGKPVTHAVVTVPAYFN 182
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 108 bits (259), Expect = 6e-25
Identities = 48/91 (52%), Positives = 63/91 (69%)
Frame = +3
Query: 255 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGXPKIKVAYKGEDKTFFPEEVS 434
MNP NT+FDAKRLIGR++ED Q D+KHWPF+V+ + G P I+V Y GE K F +E+S
Sbjct: 63 MNPRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEIS 122
Query: 435 SMVLTKMKENCRSLSRQNCAECSYQVPAYFN 527
+MVLTKMKE + + + VPAYF+
Sbjct: 123 AMVLTKMKEISEAKLNKRVEKAVITVPAYFS 153
Score = 94.3 bits (224), Expect = 1e-20
Identities = 43/58 (74%), Positives = 49/58 (84%)
Frame = +1
Query: 91 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA*TP 264
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ A P
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNP 65
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 82.2 bits (194), Expect = 4e-17
Identities = 55/152 (36%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Frame = +1
Query: 82 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA* 258
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 259 TPTTQYSMPNVSSDVSSKMLLCKPT*STGLSRLSVMEAXLRSR*H------IRVKTKPFS 420
P + ++K L+ + + R + E + H + + K +S
Sbjct: 109 NPENTF--------FATKRLIGRRFKEPEVQR-DIKEVPYKIVEHSNGDAWLEARGKTYS 159
Query: 421 PRKSVPWCLRK*RKTAXAYLGKTVQNAVIRFP 516
P + + L K R+TA YLGK V+NAV+ P
Sbjct: 160 PSQIGGFILSKMRETASTYLGKDVKNAVVTVP 191
Score = 65.7 bits (153), Expect = 4e-12
Identities = 31/91 (34%), Positives = 49/91 (53%)
Frame = +3
Query: 255 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGXPKIKVAYKGEDKTFFPEEVS 434
+NP NT F KRLIGR+F++ VQ D+K P+++V + KT+ P ++
Sbjct: 108 INPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNG---DAWLEARGKTYSPSQIG 164
Query: 435 SMVLTKMKENCRSLSRQNCAECSYQVPAYFN 527
+L+KM+E + ++ VPAYFN
Sbjct: 165 GFILSKMRETASTYLGKDVKNAVVTVPAYFN 195
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 49.2 bits (112), Expect = 4e-07
Identities = 20/59 (33%), Positives = 38/59 (64%)
Frame = +1
Query: 79 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 255
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEA 61
Score = 32.3 bits (70), Expect = 0.046
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +3
Query: 258 NPNNTIFDAKRLIGRKFEDATVQ-ADMKHWPFEVVSDGGXPKIKVAYKGEDKTFFPEEVS 434
N NT+ KRL GR ++D ++ + ++ G KV Y E+ F ++
Sbjct: 63 NFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLI 122
Query: 435 SMVLTKMKENCRSLSRQNCAECSYQVPAYF 524
+ TK+K + + ++ +PA+F
Sbjct: 123 AAYFTKIKAIAEAELIGSVSDVVISIPAWF 152
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 39.5 bits (88), Expect = 3e-04
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +1
Query: 94 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 252
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQL 79
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 29.5 bits (63), Expect = 0.32
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 94 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA*TPTT 270
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPA- 83
Query: 271 QYSMPNV 291
+S+ NV
Sbjct: 84 -HSIRNV 89
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.57
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 86 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 181
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 570
Score = 26.2 bits (55), Expect = 3.0
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -2
Query: 264 WGSCHLVLGGISDETLGVCERNIRRSGPVALVVGD-DLHLPVLEDTNARVR 115
WGS +G + TLG+ + + + L+VGD LHL V ++ +A +R
Sbjct: 418 WGSIGWSVGAMFGATLGIKDSDAPHRRSI-LIVGDGSLHLTV-QEISATIR 466
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.8 bits (54), Expect = 4.0
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -1
Query: 172 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQLSKRARL 14
G W SP S + H ++++ +F +RVL C+ L K +K+A L
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCMI-----LIWKSFAKQALL 323
>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
Spt6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1365
Score = 25.4 bits (53), Expect = 5.3
Identities = 11/44 (25%), Positives = 24/44 (54%)
Frame = -1
Query: 361 LTTSKGQCFMSACTVASSNLRPMRRLASNIVLLGFMPPGSWRHL 230
L S+ + ++S V +RP + + +IV+ + GS++H+
Sbjct: 1173 LNASQAEAYLSKMQVGDLVIRPSSKGSDHIVVTWKVAEGSYQHI 1216
>SPBC839.02 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 530
Score = 25.0 bits (52), Expect = 7.0
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +3
Query: 378 KIKVAYKGEDKTFFPEEVSSMVLTKMKEN 464
KI++++KG+ +T +PE + + +EN
Sbjct: 115 KIQLSFKGKSRTEWPEGIPPKLFDTYEEN 143
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.0 bits (52), Expect = 7.0
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 72 QNGKSTRSRNRSGYHVLLRWCLPARE 149
+NGK T +R +S + W P++E
Sbjct: 477 RNGKKTPTRTKSRMQQFINWFKPSKE 502
>SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting
protein homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 455
Score = 24.6 bits (51), Expect = 9.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 371 ASITDNLERPVLHVGLHSS 315
A + NL RP+ H LHSS
Sbjct: 408 APVIRNLPRPIYHQDLHSS 426
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 24.6 bits (51), Expect = 9.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 97 GIDLGTTYSCVGVFQHGKVEIIANDQGNR 183
G LG TY+ V Q G VE+ D N+
Sbjct: 1279 GCFLGNTYAFASVTQDGSVEVHRLDVNNQ 1307
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 24.6 bits (51), Expect = 9.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 202 AFTDTERLIGDAAKNQVA*TPTTQYSMPNVSSDV 303
AF D + G AK A P+T+ + N+S V
Sbjct: 155 AFYDASQTFGSTAKVAPAPAPSTKTPLANISKPV 188
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,337,760
Number of Sequences: 5004
Number of extensions: 49715
Number of successful extensions: 177
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 216376042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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