Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060374.seq
         (551 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    24   0.77 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   1.8  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   7.2  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   9.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   9.5  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 24.2 bits (50), Expect = 0.77
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 192 CMLCCIMQTKHRPRKTKITKMSSDYRKCPAQTVR 293
           C L C       P+ T +TK+SS   K P ++++
Sbjct: 61  CRLVCGKYGALWPQPTSVTKISSTLLKFPYRSIK 94


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 17/70 (24%), Positives = 26/70 (37%)
 Frame = +3

Query: 210 MQTKHRPRKTKITKMSSDYRKCPAQTVRRYWRTSADSNTKIIQKESPPANNNTAAKKPVP 389
           + T  RP   +     S     P QT  +  +   + +T   Q+ +  +   T    P P
Sbjct: 404 ISTTPRPEWARPPSTPSADGSKPVQTTPKPGQWVPEKSTSTTQRTTTVS---TTEAPPAP 460

Query: 390 KAENPQPSVD 419
              NPQ  VD
Sbjct: 461 AVSNPQNEVD 470


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 155 PCFSCELKQNKTSHELNIIANVNLI 81
           P F  +LK       LNII+N++ +
Sbjct: 369 PLFLTQLKDECPEVRLNIISNLDCV 393


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 76  QYIKLTFAIMLSSCDVLF 129
           +Y +  F+ +LS C V+F
Sbjct: 89  RYFEEVFSSLLSCCSVIF 106


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 76  QYIKLTFAIMLSSCDVLF 129
           +Y +  F+ +LS C V+F
Sbjct: 89  RYFEEVFSSLLSCCSVIF 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,457
Number of Sequences: 336
Number of extensions: 2998
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)