Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060374.seq
         (551 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    25   1.3  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          25   1.7  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    24   3.8  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   5.0  
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    23   5.0  

>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 4/99 (4%)
 Frame = +3

Query: 165 LTIMIWRAGCMLCCIMQTKHRPRKTK--ITKMSSDYRKCPA-QTVRRYW-RTSADSNTKI 332
           LT   W  G  +    Q++    +T   I   +    + PA  T  RY  RT   ++   
Sbjct: 271 LTPSTWPVGIGVREFFQSRQHDHQTSSPIATRNRFTTRTPATSTEHRYTTRTPTTTHRLA 330

Query: 333 IQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQN 449
            +  +PP    T++++  P   +   + + +    PPQN
Sbjct: 331 ARTSTPPDPETTSSQQCHPPVNDTLEAPNSTLVSGPPQN 369


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -1

Query: 152 CFSCELKQNKTSHELNIIANVNLIYC*ITESITIKIKG 39
           C+      NK ++E  +IA+V    C ITE      KG
Sbjct: 314 CYQIIPNNNKATYEKELIASVQFHTCAITEKEVQFTKG 351


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = -1

Query: 275 AFSII*AHFGYFRFSWSVFRLHNAA*HTTCPPNHDR*VPRPCFSCELKQNK 123
           +FS++ +     R+  +  ++ NA+  TT PP+ +   P    S E K+ K
Sbjct: 118 SFSLVISQIVSIRWYLNKRKIRNASASTTGPPDAEANAPGSGSSLEKKKKK 168


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -2

Query: 289  TVCAGHFR*SELILVIFVFLGLCFVCI 209
            T+   H++ SE    +  +L + F+CI
Sbjct: 1639 TMTLDHYKQSETFSAVLDYLNMIFICI 1665


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 392 FWYWFFGCSIVVGRWRLFLNYFSVG 318
           F YW FG ++  GR  L   + ++G
Sbjct: 90  FTYWLFGYAMAFGRGELNNPFVALG 114


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,056
Number of Sequences: 2352
Number of extensions: 11974
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51301854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)