Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060374.seq
         (551 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   4.8  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   4.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   4.8  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               21   6.3  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   8.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   8.3  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 342 ESPPANNNTAAKKPVPKAENPQPSVDLSFFQS 437
           +S  A  +T+   P   + +P PS   SFF S
Sbjct: 71  DSAAAITSTSPSYPGGGSSSPSPSSPSSFFSS 102


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 14/62 (22%), Positives = 27/62 (43%)
 Frame = +3

Query: 327 KIIQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRTIEVIEHEIEKQVILE 506
           +I    +    N  +  +PV   ++   S DLS F SP    +  +  IE +  + ++ +
Sbjct: 9   QITNSTTMSVKNEISTVEPVDPVKSLVCSPDLSVFTSPACGSETPLTNIEEKTYQCLLCQ 68

Query: 507 SA 512
            A
Sbjct: 69  KA 70


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +3

Query: 378 KPVPKAENPQPSVDLSFFQSPP 443
           KP+P  +NP+ + +L +  + P
Sbjct: 307 KPLPMVDNPESTGNLVYIYNNP 328


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 250 LVIFVFLGLCFVCIMQHSIQPALQIMIV 167
           LVIFV++    V I  + I   L+IM V
Sbjct: 5   LVIFVYILSVAVIIRANGINEILKIMAV 32


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
            isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 11/54 (20%), Positives = 24/54 (44%)
 Frame = +3

Query: 324  TKIIQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRTIEVIEHEI 485
            +K +Q+ S      ++     P     +P        SPP   +RT++V+++ +
Sbjct: 866  SKSLQEVSSDKLQESSTDSRNPALALAEPYNQRGTVVSPPPTKRRTMKVVKYHL 919


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
            isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 11/54 (20%), Positives = 24/54 (44%)
 Frame = +3

Query: 324  TKIIQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRTIEVIEHEI 485
            +K +Q+ S      ++     P     +P        SPP   +RT++V+++ +
Sbjct: 904  SKSLQEVSSDKLQESSTDSRNPALALAEPYNQRGTVVSPPPTKRRTMKVVKYHL 957


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,287
Number of Sequences: 438
Number of extensions: 3585
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)