Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060373.seq
         (571 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to ...    40   0.001
At1g06360.1 68414.m00672 fatty acid desaturase family protein si...    39   0.003
At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to ...    37   0.011
At1g06090.1 68414.m00638 fatty acid desaturase family protein si...    34   0.058
At1g06350.1 68414.m00671 fatty acid desaturase family protein si...    33   0.10 
At3g15850.1 68416.m02005 fatty acid desaturase family protein si...    33   0.18 
At1g06100.1 68414.m00639 fatty acid desaturase family protein si...    33   0.18 
At1g06120.1 68414.m00641 fatty acid desaturase family protein si...    29   2.9  
At1g01650.1 68414.m00083 protease-associated (PA) domain-contain...    28   3.8  
At4g14980.1 68417.m02302 DC1 domain-containing protein contains ...    27   8.8  

>At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to
           delta 9 acyl-lipid desaturase (ADS2) GI:2970036 from
           [Arabidopsis thaliana]
          Length = 307

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 21/49 (42%), Positives = 27/49 (55%)
 Frame = +2

Query: 356 LHIAALYGGYLFLFHAKWQTDLFAYILYVMSGLGITAGAHRLWAHKSYK 502
           +H  AL   + F + A W T LF    Y + GLGIT   HR  AH+S+K
Sbjct: 50  VHSLALLAPFYFTWSALWVTFLF----YTIGGLGITVSYHRNLAHRSFK 94


>At1g06360.1 68414.m00672 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase (ADS1)
           GI:2970034 from [Arabidopsis thaliana]
          Length = 299

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +2

Query: 395 FHAKWQTDLFAYILYVMSGLGITAGAHRLWAHKSYK 502
           F+ KW+   F ++LY ++ L IT   HR  AH+S+K
Sbjct: 51  FNYKWEALRFGFVLYALTSLSITFSYHRNLAHRSFK 86


>At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to
           delta 9 acyl-lipid desaturase (ADS1) GB:BAA25180
           GI:2970034 from [Arabidopsis thaliana]
          Length = 305

 Score = 36.7 bits (81), Expect = 0.011
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
 Frame = +2

Query: 365 AALYGGYLFL---FHAKWQTDLFAYILYVMSGLGITAGAHRLWAHKSYK 502
           A+L+  +L L   F+  W     A I+Y + GLGIT   HR  AH+S+K
Sbjct: 44  ASLFVHFLCLLAPFNFTWPALRVALIVYTVGGLGITVSYHRNLAHRSFK 92


>At1g06090.1 68414.m00638 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase GB:BAA25180
           GI:2970034 (ADS1) from [Arabidopsis thaliana]
          Length = 299

 Score = 34.3 bits (75), Expect = 0.058
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +2

Query: 395 FHAKWQTDLFAYILYVMSGLGITAGAHRLWAHKSYK 502
           F+ KW+   F  IL +++ L IT   HR   HKS+K
Sbjct: 51  FNYKWEALRFGVILAIVTSLSITFSYHRNLTHKSFK 86


>At1g06350.1 68414.m00671 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase (ADS1)
           GI:2970034 from [Arabidopsis thaliana]
          Length = 300

 Score = 33.5 bits (73), Expect = 0.10
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 395 FHAKWQTDLFAYILYVMSGLGITAGAHRLWAHKSYK 502
           F+ KW+   F  +L+ ++ L IT   HR  +H+S+K
Sbjct: 52  FNFKWEALRFGLVLFALTTLSITFSFHRNLSHRSFK 87


>At3g15850.1 68416.m02005 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase (ADS1)
           GI:2970034 from [Arabidopsis thaliana]
          Length = 371

 Score = 32.7 bits (71), Expect = 0.18
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +2

Query: 395 FHAKWQTDLFAYILYVMSGL-GITAGAHRLWAHKSYK 502
           F   W+    A+ LY+++GL GIT   HR  +HK++K
Sbjct: 121 FQFNWRAVSVAFGLYIVTGLLGITLSFHRNLSHKAFK 157


>At1g06100.1 68414.m00639 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase (ADS1)
           GI:2970034 from [Arabidopsis thaliana]
          Length = 299

 Score = 32.7 bits (71), Expect = 0.18
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +2

Query: 395 FHAKWQTDLFAYILYVMSGLGITAGAHRLWAHKSYK 502
           F+ KW+   F  IL +++ L IT   HR   H+S+K
Sbjct: 51  FNYKWEAFRFGIILAILTNLCITFSYHRNLTHRSFK 86


>At1g06120.1 68414.m00641 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase GB:BAA25180
           GI:2970034 (ADS1) from [Arabidopsis thaliana]; supported
           by cDNA:gi_12083275_gb_AF332434.1_AF332434
          Length = 299

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 395 FHAKWQTDLFAYILYVMSGLGITAGAHRLWAHKSYK 502
           F+  W+   FA ++ + + L IT   HR   H+S+K
Sbjct: 51  FNYTWEAFRFAAMVGISTNLSITFSYHRNLTHRSFK 86


>At1g01650.1 68414.m00083 protease-associated (PA) domain-containing
           protein contains protease associated (PA) domain,
           Pfam:PF02225
          Length = 491

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 20/51 (39%), Positives = 28/51 (54%)
 Frame = +2

Query: 362 IAALYGGYLFLFHAKWQTDLFAYILYVMSGLGITAGAHRLWAHKSYKAKGL 514
           I+A++GG+LF  HA     L AY++ V  G+G T   HR W   +    GL
Sbjct: 260 ISAIFGGFLFPDHA-----LQAYVILVYRGVGGTL-LHR-WRRGAANLFGL 303


>At4g14980.1 68417.m02302 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 470

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 288 VLDSPKSGVSAYFQREHHLHPLHW 217
           V D   S VS  FQ + H HPL+W
Sbjct: 291 VYDVRCSSVSEPFQHDLHPHPLYW 314


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,877,722
Number of Sequences: 28952
Number of extensions: 242225
Number of successful extensions: 506
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 506
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1102220672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)