Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060372.seq
(680 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 105 2e-23
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 99 4e-21
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 84 9e-17
08_01_0397 - 3509186-3510291,3510322-3512335 71 9e-13
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 67 1e-11
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 67 1e-11
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 66 3e-11
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 60 1e-09
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 50 1e-06
02_01_0381 - 2764331-2764342,2768966-2769907 50 1e-06
03_05_0865 - 28365430-28367640 50 2e-06
06_03_1255 + 28780181-28781172,28782065-28782932 49 3e-06
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 47 1e-05
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 44 1e-04
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 44 1e-04
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 44 1e-04
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 44 1e-04
01_07_0333 - 42813789-42814073,42814229-42814315,42815083-428151... 44 1e-04
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 43 2e-04
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 43 3e-04
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 42 3e-04
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 42 5e-04
07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743... 42 5e-04
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 42 5e-04
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 42 6e-04
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 42 6e-04
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 41 0.001
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 41 0.001
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 40 0.002
06_03_0337 + 19678152-19678484,19678616-19678801,19679232-196794... 39 0.003
12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638... 38 0.007
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 38 0.007
01_05_0721 + 24594815-24594834,24595207-24595313,24595417-245954... 38 0.007
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 38 0.010
03_01_0059 + 484305-484617,484919-485406,485608-486092,486185-48... 38 0.010
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 37 0.013
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 37 0.013
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 36 0.030
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 36 0.030
03_02_0189 - 6253659-6255380 35 0.052
01_01_0447 - 3327727-3328144,3328438-3328688,3328820-3328909,332... 35 0.052
02_05_1293 - 35520733-35520963,35521696-35521878,35522040-355222... 35 0.069
02_05_0064 - 25529630-25531440,25531663-25531673,25533113-255331... 35 0.069
01_06_0020 + 25630728-25631023,25631308-25631548,25631629-256317... 34 0.091
03_05_0052 - 20293197-20293310,20293938-20294024,20294133-202942... 33 0.28
06_03_0287 - 19168685-19168735,19168847-19168884,19169517-191697... 32 0.37
06_03_1284 - 28988287-28988922,28989335-28989765,28989850-289899... 30 2.0
02_01_0355 + 2558792-2558862,2558993-2559099,2559185-2559615,256... 30 2.0
11_04_0282 - 15748713-15748764,15749213-15749293,15749439-157495... 29 4.5
07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225... 28 6.0
11_08_0102 - 28354880-28355056,28355159-28355376,28355634-283557... 28 7.9
09_03_0167 + 12965030-12965356,12966100-12966387,12966704-129668... 28 7.9
01_05_0296 + 20567259-20567386,20568895-20569123,20569205-205694... 28 7.9
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 105 bits (253), Expect = 2e-23
Identities = 48/111 (43%), Positives = 67/111 (60%)
Frame = +1
Query: 262 SLQPFNKNFXDPHPTVLKRSPYEXEEYRNXHEVTVSGVEXHNXIQYFEEANFPDYVQQGV 441
SL PF KNF P V S + +YR ++TV G + ++YF+EANFPDY Q +
Sbjct: 112 SLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPDYCMQAI 171
Query: 442 KTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAAIVHINNQP 594
G+ EPTPIQ+Q + + ++G QTGSGKTL+Y+L +VH+ QP
Sbjct: 172 AKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQP 222
Score = 32.7 bits (71), Expect = 0.28
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = +2
Query: 485 GWPIAMSGRX*LGVLKRVPAKRWPTSWQPLCT*TTNRPISET*WSDLLWVLAPTRELAQQ 664
GWP+A+ GR +G+ + K + P +P E ++ +LAPTRELA Q
Sbjct: 186 GWPMALKGRDMIGIAQTGSGKTL-SYLLPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQ 244
Query: 665 IR 670
I+
Sbjct: 245 IQ 246
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 98.7 bits (235), Expect = 4e-21
Identities = 48/110 (43%), Positives = 65/110 (59%)
Frame = +1
Query: 265 LQPFNKNFXDPHPTVLKRSPYEXEEYRNXHEVTVSGVEXHNXIQYFEEANFPDYVQQGVK 444
L F KNF P+V + E E YR E+TV G + ++ F + FP+YV Q +
Sbjct: 48 LPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEIT 107
Query: 445 TMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAAIVHINNQP 594
G+ EPTPIQ+Q + + L+G +TGSGKTLAY+L AIVH+N QP
Sbjct: 108 KAGFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQP 157
Score = 34.7 bits (76), Expect = 0.069
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +2
Query: 485 GWPIAMSGRX*LGVLKRVPAKRWPTSWQPLCT*TTNRPISET*WSDLLWVLAPTRELAQQ 664
GWP+A+ GR +G+ + K P +PI ++ VLAPTRELA Q
Sbjct: 121 GWPMALRGRDLIGIAETGSGKTL-AYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQ 179
Query: 665 IR 670
I+
Sbjct: 180 IQ 181
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 84.2 bits (199), Expect = 9e-17
Identities = 40/113 (35%), Positives = 62/113 (54%)
Frame = +1
Query: 256 SVSLQPFNKNFXDPHPTVLKRSPYEXEEYRNXHEVTVSGVEXHNXIQYFEEANFPDYVQQ 435
++ +PFNK+F + P+V S E +Y + VSG + I+ F + FP +
Sbjct: 173 TIEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMN 232
Query: 436 GVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAAIVHINNQP 594
+ GY++PT IQ Q L + ++G +TGSGKT A++L IVHI +QP
Sbjct: 233 AIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQP 285
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = +2
Query: 491 PIAMSGRX*LGVLKRVPAKRWPTSWQPLCT*TTNRPISET*WSDLLWVLAPTRELAQQI 667
PI +SGR +G+ K K P+ ++P E + V APTRELA QI
Sbjct: 251 PIVLSGRDIIGIAKTGSGKT-AAFVLPMIVHIMDQPELEKEEGPIGVVCAPTRELAHQI 308
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 70.9 bits (166), Expect = 9e-13
Identities = 36/113 (31%), Positives = 59/113 (52%)
Frame = +1
Query: 259 VSLQPFNKNFXDPHPTVLKRSPYEXEEYRNXHEVTVSGVEXHNXIQYFEEANFPDYVQQG 438
+ QPF KNF + K + E YR E+ V G + I+ + ++ +
Sbjct: 379 IDYQPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSKLLDT 438
Query: 439 VKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAAIVHINNQPA 597
+K +G+++P IQAQ L + +G +TGSGKTLA++L + H+ +QPA
Sbjct: 439 IKKLGFEKPMSIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPA 491
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 67.3 bits (157), Expect = 1e-11
Identities = 34/112 (30%), Positives = 57/112 (50%)
Frame = +1
Query: 259 VSLQPFNKNFXDPHPTVLKRSPYEXEEYRNXHEVTVSGVEXHNXIQYFEEANFPDYVQQG 438
+ QPF KN + + E YR E+ V G + I+ + ++ +
Sbjct: 240 IEYQPFRKNLYIEVKDITMMTGEEVATYRKNLELKVHGKDVPKPIKTWVQSGLTSKLLDT 299
Query: 439 VKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAAIVHINNQP 594
+K +G+++P PIQAQ L + +G +TGSGKTLA++L + H+ +QP
Sbjct: 300 IKKLGFEKPMPIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQP 351
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 67.3 bits (157), Expect = 1e-11
Identities = 33/83 (39%), Positives = 46/83 (55%)
Frame = +1
Query: 334 EEYRNXHEVTVSGVEXHNXIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWKX 513
E YR+ HE+TV G I FE FP + + ++ G+ PTPIQAQ + +
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQD 189
Query: 514 LVGRTQTGSGKTLAYILAAIVHI 582
+V +TGSGKTL Y+L +HI
Sbjct: 190 VVAIAKTGSGKTLGYLLPGFMHI 212
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 65.7 bits (153), Expect = 3e-11
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = +1
Query: 262 SLQPFNKNFXDPH-PTVLKRSPYEXEEYRNXHEVTVSGVEXHNXIQYFEEANFPDYVQQG 438
S++P ++ F P+ P++ + YR HEVT G FE FP + Q
Sbjct: 564 SMRPPSRMFAPPNFPSIASA-----DAYRQHHEVTAVGENVPPPFMTFEATGFPPEILQE 618
Query: 439 VKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAAIVHI 582
+ G+ PTPIQAQ + + +V +TGSGKTL Y++ A +H+
Sbjct: 619 IHAAGFLNPTPIQAQTWPVALQNRDIVAIAKTGSGKTLGYLIPAFIHL 666
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/81 (35%), Positives = 43/81 (53%)
Frame = +1
Query: 334 EEYRNXHEVTVSGVEXHNXIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWKX 513
E YR HE+T+ G E F+ FP + + V+ G+ PTPIQAQ + +
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRNRD 219
Query: 514 LVGRTQTGSGKTLAYILAAIV 576
+V +TGSGKTL Y++ +
Sbjct: 220 IVAVAKTGSGKTLGYLIPGFI 240
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/82 (28%), Positives = 43/82 (52%)
Frame = +1
Query: 343 RNXHEVTVSGVEXHNXIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWKXLVG 522
R+ ++ V G + + I F + P+ + ++ GY PTP+Q Q + S + L+
Sbjct: 165 RSKLDICVKGEDVPDPIMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICNRSLLV 224
Query: 523 RTQTGSGKTLAYILAAIVHINN 588
TGSGKT ++++ I H ++
Sbjct: 225 SADTGSGKTASFLVPIIAHCSH 246
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 50.4 bits (115), Expect = 1e-06
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Frame = +1
Query: 232 EHASPRLGSVSLQPFNKN--FXDP------HPTVLKRSPY-EXEEYRNXHEVTVSGVEXH 384
EH S R +S++ K + DP P L+R P + +E R + V G +
Sbjct: 119 EHLSDRKTLMSVRELAKGITYSDPLKTGWKPPLRLRRMPRAKADELRRKWHILVDGDDVP 178
Query: 385 NXIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYIL 564
+ F + P+ + + ++ G +PTPIQ Q L + ++G TGSGKTL ++L
Sbjct: 179 PPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVL 238
Query: 565 AAIV 576
I+
Sbjct: 239 PLIM 242
>03_05_0865 - 28365430-28367640
Length = 736
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/85 (27%), Positives = 44/85 (51%)
Frame = +1
Query: 340 YRNXHEVTVSGVEXHNXIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWKXLV 519
+R ++ G + ++ + E+ + + V+ GYKEP+PIQ + + ++
Sbjct: 297 FREDFNISYKGSKVPRPMRKWSESKLGTELLRAVEKAGYKEPSPIQMASIPLGLQQRDVI 356
Query: 520 GRTQTGSGKTLAYILAAIVHINNQP 594
G +TGSGKT A++L + +I P
Sbjct: 357 GIAETGSGKTAAFVLPMLSYITRLP 381
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = +1
Query: 301 PTVLKRSPYEXEE-YRNXHEVTVSGVEXHNXIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 477
P L+R P + R + V G + + F + P+ + + ++ G ++PTPIQ
Sbjct: 141 PLRLRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQ 200
Query: 478 AQXLADSYVWKXLVGRTQTGSGKTLAYILAAIV 576
Q L + + ++G TGSGKTL ++L I+
Sbjct: 201 VQGLPVALSGRDMIGIAFTGSGKTLVFVLPLIM 233
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/72 (34%), Positives = 36/72 (50%)
Frame = +1
Query: 358 VTVSGVEXHNXIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTG 537
V VSG + FE A + V + V GY+ PTP+Q + + + L+ QTG
Sbjct: 72 VEVSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGRDLMACAQTG 131
Query: 538 SGKTLAYILAAI 573
SGKT A+ L +
Sbjct: 132 SGKTAAFCLPVV 143
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAAIVH 579
FE + V +GV+ GY+ PTPIQ + + + +TGSGKT A+++ I
Sbjct: 28 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQR 87
Query: 580 INNQPAYFG 606
+ A G
Sbjct: 88 LRRHDAGAG 96
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Frame = +1
Query: 448 MGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAY---ILAAIVHINNQPAYFGDVM 615
MG+K PT IQA+ + + + ++G QTGSGKT A+ I+ A++ ++P +F V+
Sbjct: 1 MGWKAPTRIQAEVIPFALQGRDVIGVGQTGSGKTAAFALPIIQALLEHEHRPCFFACVL 59
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = +1
Query: 439 VKTMGYKEPTPIQAQXL-ADSYVWKXLVGRTQTGSGKTLAY 558
V+ +G+KEPTPIQ A ++ K ++G +TGSGKTLA+
Sbjct: 157 VRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAF 197
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +1
Query: 358 VTVSGVEXHNXIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTG 537
V SG + + F E + D + + ++ Y +PTP+Q + S + L+ QTG
Sbjct: 225 VETSGHDVPPPVNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTG 284
Query: 538 SGKTLAYILAAI 573
SGKT A+ I
Sbjct: 285 SGKTAAFCFPII 296
>01_07_0333 -
42813789-42814073,42814229-42814315,42815083-42815172,
42815555-42815623,42815859-42815888,42816060-42816164,
42816454-42816549,42816647-42816760,42816862-42816955,
42817027-42817190
Length = 377
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +1
Query: 418 PDYVQQGVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAAIVHIN 585
P++V Q + +GY PT +Q Q L + + QTGSGKTLAY+L+ I+
Sbjct: 49 PEHVLQRAEEVGYVVPTEVQEQSLPVLLSGQDCILHAQTGSGKTLAYLLSVFSAID 104
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +1
Query: 448 MGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAAI 573
MG+KEPT IQA+ + + + L+G QTGSGKT A+ L I
Sbjct: 59 MGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALPII 100
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/87 (32%), Positives = 41/87 (47%)
Frame = +1
Query: 328 EXEEYRNXHEVTVSGVEXHNXIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVW 507
E EE + E+T SG E + +++ +K+ G K PIQA
Sbjct: 82 EEEEDDDEGELTASGDEDPADPNALANFRISESLREKLKSKGIKALFPIQATTFDLVLDG 141
Query: 508 KXLVGRTQTGSGKTLAYILAAIVHINN 588
LVGR +TG GKTLA++L + + N
Sbjct: 142 HDLVGRARTGQGKTLAFVLPILESLVN 168
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/65 (32%), Positives = 35/65 (53%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAAIVH 579
F E N + + + +GY++PTPIQA + + + + G TGSGKT A+ L +
Sbjct: 196 FLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVLER 255
Query: 580 INNQP 594
+ +P
Sbjct: 256 LLFRP 260
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 41.9 bits (94), Expect = 5e-04
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = +1
Query: 343 RNXHEVTVSGVEXHNXIQYFEEA----NFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWK 510
R ++ +SG ++ FEE Y+ + +G++EPTPIQ Q + +
Sbjct: 125 RKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGR 184
Query: 511 XLVGRTQTGSGKTLAYILAAIVHI 582
TGSGKTLA++ ++ I
Sbjct: 185 ECFACAPTGSGKTLAFLFPILMKI 208
>07_03_0601 -
19872780-19873099,19873148-19873151,19874196-19874357,
19874429-19874617,19874687-19875010,19875103-19875378,
19875436-19875478,19876110-19876188,19876473-19876555,
19876708-19876782,19877324-19877490,19877960-19878370
Length = 710
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/59 (30%), Positives = 34/59 (57%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAAIV 576
F+E + + G++ GY E + IQ L + + ++G +TGSGKTLA+++ ++
Sbjct: 82 FDELPLSNKTKDGLRKAGYTEMSEIQRAALPHALCGRDVLGAAKTGSGKTLAFVIPVLM 140
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +1
Query: 358 VTVSGVEXHNXIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTG 537
V SG + F E + D + + ++ Y +PTP+Q + S + L+ QTG
Sbjct: 311 VETSGHDVPPPANTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTG 370
Query: 538 SGKTLAYILAAI 573
SGKT A+ I
Sbjct: 371 SGKTAAFCFPII 382
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/79 (30%), Positives = 34/79 (43%)
Frame = +1
Query: 358 VTVSGVEXHNXIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTG 537
V SG E + F E + + ++ Y PTP+Q + S + L+ QTG
Sbjct: 143 VETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRDLMACAQTG 202
Query: 538 SGKTLAYILAAIVHINNQP 594
SGKT A+ I I P
Sbjct: 203 SGKTAAFCFPIISGIMRGP 221
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/45 (46%), Positives = 31/45 (68%)
Frame = +1
Query: 448 MGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAAIVHI 582
MG++ PT IQAQ + + + ++ + TG+GKTLAY LA IVH+
Sbjct: 42 MGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAY-LAPIVHL 85
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/58 (34%), Positives = 32/58 (55%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAAI 573
F E + + ++ M Y T IQA+ + K ++G +TGSGKTLA+++ AI
Sbjct: 98 FSELGVSEPTARAIREMNYTYLTQIQARSIPHLLNGKDVMGAAKTGSGKTLAFLIPAI 155
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYIL 564
F+E + +++ ++ G + TPIQ + + K +V + +TGSGKT AY+L
Sbjct: 85 FDELGLDEQLKRALRKKGLDKATPIQREAIPLILEGKDVVAKAKTGSGKTFAYLL 139
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 391 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAA 570
+ FEE + V + MG +PT IQ + +V + TGSGKTLAY+L
Sbjct: 109 VDSFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPL 168
Query: 571 I-VHINN 588
+ + I N
Sbjct: 169 VQIEIEN 175
>06_03_0337 +
19678152-19678484,19678616-19678801,19679232-19679417,
19680840-19680926,19681045-19681086,19681164-19681253,
19681399-19681503,19681797-19681835,19681914-19682018,
19682463-19682531,19682587-19682736,19683156-19683335
Length = 523
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAAI 573
F + D ++ M Y T IQA+ + + ++ +TGSGKTLA+++ AI
Sbjct: 88 FSDLPISDLTANAIRDMNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFLIPAI 145
>12_02_1076 -
25862671-25863159,25863290-25863451,25863614-25863838,
25863939-25864037,25864584-25864992,25865094-25865221,
25865955-25866329
Length = 628
Score = 37.9 bits (84), Expect = 0.007
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +1
Query: 418 PDYVQQGVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAY---ILAAIVHIN- 585
P V Q + + G + PIQ L + K +VGR +TG+GKTLA+ IL AI+ N
Sbjct: 107 PKIVSQ-LASRGITKLFPIQRAVLEPAMQGKDMVGRAKTGTGKTLAFGIPILDAIIRHNE 165
Query: 586 -NQPAYF 603
N P F
Sbjct: 166 KNSPGKF 172
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/64 (25%), Positives = 34/64 (53%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAAIVH 579
FE+ + G+ G++ P+PIQ + + + ++ R + G+GKT A+ + A+
Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 195
Query: 580 INNQ 591
I+ +
Sbjct: 196 IDQE 199
>01_05_0721 +
24594815-24594834,24595207-24595313,24595417-24595472,
24595562-24595810,24595871-24596077,24596157-24596243,
24596331-24596426,24596500-24596715,24596908-24597090,
24597222-24597449
Length = 482
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAAIVH 579
F++ + VK GY+ T +Q L K ++ + +TG+GKT+A++L AI
Sbjct: 8 FDQCTISPLSLKAVKDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAFLLPAIEV 67
Query: 580 INNQP 594
++ P
Sbjct: 68 LSALP 72
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +1
Query: 451 GYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAAIVHINNQ 591
G++ P+PIQA + +G TGSGKT+A+ + A++H+ +
Sbjct: 111 GFERPSPIQAYAWPYLLDGRDFIGIAATGSGKTIAFGVPALMHVRRK 157
>03_01_0059 +
484305-484617,484919-485406,485608-486092,486185-486461,
486495-486626,486721-486893,486982-487204
Length = 696
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAAIVH 579
F+E D + +++ G+ P+ IQA K + Q+GSGKTLAY+ + +
Sbjct: 242 FKEIGCSDEILGALRSFGFPRPSHIQAMAYRPVLEGKSCIIGDQSGSGKTLAYLCPVVQN 301
Query: 580 INNQ 591
+ +
Sbjct: 302 LRKE 305
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAAIVH 579
FE+ + G+ G++ P+PIQ + + + ++ R + G+GKT A+ + A+
Sbjct: 149 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
Query: 580 IN 585
I+
Sbjct: 209 ID 210
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAAIVH 579
FE+ + G+ G++ P+PIQ + + + ++ R + G+GKT A+ + A+
Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 185
Query: 580 IN 585
I+
Sbjct: 186 ID 187
>07_03_1392 -
26238885-26239007,26239137-26239235,26239636-26239720,
26239825-26240028,26240360-26240682,26241904-26242575
Length = 501
Score = 35.9 bits (79), Expect = 0.030
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAAIVH 579
F E ++ ++G + PT +Q + + + + ++G +TGSGKT A+ L +
Sbjct: 79 FAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALPILHR 138
Query: 580 INNQP 594
+ P
Sbjct: 139 LGEDP 143
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 35.9 bits (79), Expect = 0.030
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = +1
Query: 433 QGVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAAIVHINNQP 594
+ +K GY++ T +Q L + ++ + +TG+GKT+A++L AI ++ P
Sbjct: 87 KAIKDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAFLLPAIELLSTLP 140
>03_02_0189 - 6253659-6255380
Length = 573
Score = 35.1 bits (77), Expect = 0.052
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAAIVH 579
FEE P + + G PT +Q+ + V ++ TGSGKTLAY+L +
Sbjct: 133 FEELGLPPLLIDRLNKEGLSTPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPILSE 192
Query: 580 I 582
I
Sbjct: 193 I 193
>01_01_0447 -
3327727-3328144,3328438-3328688,3328820-3328909,
3329061-3329159,3329240-3329353,3329450-3329555,
3329661-3329740,3329913-3330173,3330271-3330507,
3330635-3330922
Length = 647
Score = 35.1 bits (77), Expect = 0.052
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +1
Query: 427 VQQGVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAAIVHINNQPA 597
V + +K G++ TP+QA + K + TGSGKTLA+++ + + +P+
Sbjct: 34 VVKALKGGGFRRCTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFVVPVVEILRRRPS 90
>02_05_1293 -
35520733-35520963,35521696-35521878,35522040-35522255,
35522936-35523022,35523125-35523331,35523426-35523650,
35523743-35523798,35524009-35524115,35524443-35525470
Length = 779
Score = 34.7 bits (76), Expect = 0.069
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAAIVH 579
FEE + + GY + T +Q L K ++ + +TG+GK+ A++L AI
Sbjct: 344 FEECGISPLTVKALTDAGYVQTTVVQETALPMCLEGKDVLVKAKTGTGKSAAFLLPAIES 403
Query: 580 INN 588
+ N
Sbjct: 404 VLN 406
>02_05_0064 -
25529630-25531440,25531663-25531673,25533113-25533198,
25533412-25534259,25535385-25535736
Length = 1035
Score = 34.7 bits (76), Expect = 0.069
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAAIVH 579
FEE P + + G PT +Q+ + V ++ TGSGKTLAY+L +
Sbjct: 595 FEELGLPPLLIDRLNKEGLTAPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPILSE 654
Query: 580 I 582
I
Sbjct: 655 I 655
>01_06_0020 +
25630728-25631023,25631308-25631548,25631629-25631709,
25632109-25632216,25632329-25632448,25632806-25632943,
25633064-25633150,25633802-25633915
Length = 394
Score = 34.3 bits (75), Expect = 0.091
Identities = 21/82 (25%), Positives = 41/82 (50%)
Frame = +1
Query: 304 TVLKRSPYEXEEYRNXHEVTVSGVEXHNXIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 483
T +R P ++ E T GVE I F++ D + +G+ G+++P+ IQ +
Sbjct: 5 TTSRRGPGAMDDENLTFE-TSPGVEV---ISSFDQMGIRDDLLRGIYAYGFEKPSAIQQR 60
Query: 484 XLADSYVWKXLVGRTQTGSGKT 549
+ + ++ + Q+G+GKT
Sbjct: 61 AVLPIISGRDVIAQAQSGTGKT 82
>03_05_0052 -
20293197-20293310,20293938-20294024,20294133-20294270,
20295009-20295128,20295236-20295343,20296053-20296133,
20296216-20296456,20297010-20297305
Length = 394
Score = 32.7 bits (71), Expect = 0.28
Identities = 20/82 (24%), Positives = 41/82 (50%)
Frame = +1
Query: 304 TVLKRSPYEXEEYRNXHEVTVSGVEXHNXIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 483
T +R P ++ E T GVE I F++ + + +G+ G+++P+ IQ +
Sbjct: 5 TTSRRGPGAMDDENLTFE-TSPGVEV---ISSFDQMGIREDLLRGIYAYGFEKPSAIQQR 60
Query: 484 XLADSYVWKXLVGRTQTGSGKT 549
+ + ++ + Q+G+GKT
Sbjct: 61 AVLPIISGRDVIAQAQSGTGKT 82
>06_03_0287 -
19168685-19168735,19168847-19168884,19169517-19169727,
19171461-19171643,19171879-19172028,19172161-19172256,
19172378-19172464,19172535-19172741,19172823-19173047,
19173150-19173261,19173397-19173453,19175522-19176882
Length = 925
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/32 (37%), Positives = 23/32 (71%)
Frame = +1
Query: 499 YVWKXLVGRTQTGSGKTLAYILAAIVHINNQP 594
Y+ K ++ + +TG+GKT+A++L AI ++ P
Sbjct: 490 YIGKDVLAKAKTGTGKTVAFLLPAIEVVSKLP 521
>06_03_1284 -
28988287-28988922,28989335-28989765,28989850-28989956,
28990066-28990136
Length = 414
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/53 (20%), Positives = 29/53 (54%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAY 558
F++ + + +G+ G+++P+ IQ + + ++ + Q+G+GKT +
Sbjct: 43 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATF 95
>02_01_0355 +
2558792-2558862,2558993-2559099,2559185-2559615,
2560100-2560735
Length = 414
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/53 (20%), Positives = 29/53 (54%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAY 558
F++ + + +G+ G+++P+ IQ + + ++ + Q+G+GKT +
Sbjct: 43 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATF 95
>11_04_0282 -
15748713-15748764,15749213-15749293,15749439-15749522,
15749623-15749788,15751098-15751245
Length = 176
Score = 28.7 bits (61), Expect = 4.5
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2
Query: 539 PAKRWPTSWQPLC 577
P+++WP WQPLC
Sbjct: 34 PSQQWPPLWQPLC 46
>07_01_0322 -
2258067-2258519,2258620-2258781,2258896-2259159,
2259196-2259294,2259723-2260131,2260223-2260350,
2261115-2261181,2262766-2262838,2262911-2263130
Length = 624
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 508 KXLVGRTQTGSGKTLAY 558
K ++GR +TG+GKTLA+
Sbjct: 131 KDMIGRARTGTGKTLAF 147
>11_08_0102 -
28354880-28355056,28355159-28355376,28355634-28355712,
28356451-28356519,28356602-28356681,28356818-28356925,
28357103-28357169,28357894-28357959,28358042-28358119,
28358198-28358250,28359542-28359575,28359851-28359865,
28360082-28360109,28360628-28360716,28361688-28361810,
28362192-28362296,28362381-28362485,28362924-28363139,
28364656-28364845,28365193-28365418,28366096-28366162
Length = 730
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
Frame = +1
Query: 535 GSGKTLAYILAAIVH------INNQPAYFGD-VMVRFALGLGAYQRVSTTN 666
G GK+L Y L A++H ++ + D VM ALG+ AY STTN
Sbjct: 130 GGGKSLCYQLPAVLHDGITLVVSPLLSLIQDQVMGLAALGIQAYMLASTTN 180
>09_03_0167 +
12965030-12965356,12966100-12966387,12966704-12966826,
12967229-12967611,12967863-12968190,12968324-12968353,
12968837-12968989,12969510-12969815
Length = 645
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAAI 573
+E D + + G P+ +QA + ++ +TGSGKT Y++ I
Sbjct: 84 WESLGVSDRLASALHGAGLARPSLVQAACIPHVLTTNDVIVAAETGSGKTHGYLVPLI 141
>01_05_0296 +
20567259-20567386,20568895-20569123,20569205-20569436,
20569583-20569701,20570321-20570377,20570455-20570639,
20571416-20571560,20571630-20571713,20571798-20571861,
20571889-20571932
Length = 428
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/61 (22%), Positives = 33/61 (54%)
Frame = +1
Query: 466 TPIQAQXLADSYVWKXLVGRTQTGSGKTLAYILAAIVHINNQPAYFGDVMVRFALGLGAY 645
TP+Q + + + + ++ + ++G GKT ++L+++ I+ G +++ L AY
Sbjct: 60 TPVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALVLCHTREL-AY 118
Query: 646 Q 648
Q
Sbjct: 119 Q 119
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,520,160
Number of Sequences: 37544
Number of extensions: 315115
Number of successful extensions: 721
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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