Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060371.seq
         (663 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4E2Y8 Cluster: Putative uncharacterized protein; n=2; ...    34   2.7  
UniRef50_Q8WZ42 Cluster: Titin; n=65; Eukaryota|Rep: Titin - Hom...    34   2.7  
UniRef50_A5X6X5 Cluster: Titin a; n=10; Euteleostomi|Rep: Titin ...    33   6.1  
UniRef50_Q22GZ8 Cluster: Putative uncharacterized protein; n=1; ...    33   8.1  

>UniRef50_Q4E2Y8 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 387

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +1

Query: 553 RSATDXPNQTRKENKPNHKMSKGSRHISQEG 645
           RSATD P + RK   P+ K SKG +   +EG
Sbjct: 35  RSATDVPERNRKPGSPSKKESKGKKKKKREG 65


>UniRef50_Q8WZ42 Cluster: Titin; n=65; Eukaryota|Rep: Titin - Homo
             sapiens (Human)
          Length = 34350

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = -1

Query: 552   AXDQFPLPDEPDAPELSYE*QSAHLVGWRYPIIYDFGYPITSF 424
             A D+F +PD PD P ++   + + LV W  P  +D G PIT++
Sbjct: 17932 AKDRFRVPDAPDQPIVTEVTKDSALVTWNKP--HDGGKPITNY 17972


>UniRef50_A5X6X5 Cluster: Titin a; n=10; Euteleostomi|Rep: Titin a -
             Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 32757

 Score = 33.1 bits (72), Expect = 6.1
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -1

Query: 558   TSAXDQFPLPDEPDAPELSYE*QSAHLVGWRYPIIYDFGYPITSF 424
             T A D F +PD P AP +    +   L+ W  P   D G PIT++
Sbjct: 16672 TKAKDVFKVPDAPQAPVVKEIYKDTALISWLQPA--DGGKPITNY 16714


>UniRef50_Q22GZ8 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 160

 Score = 32.7 bits (71), Expect = 8.1
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -1

Query: 210 HQHKQLSNFSRCPLRKFRIFMNYKSRLNNYLIDKFTTH 97
           HQ + L     CP + FR  MN  S  NN+L   + TH
Sbjct: 49  HQKESLIKLFFCPDQTFRQSMNMTSNANNFLDSSYITH 86


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,087,694
Number of Sequences: 1657284
Number of extensions: 13227239
Number of successful extensions: 29141
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29131
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)