Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060371.seq
         (663 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   1.7  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   6.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.0  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.0  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.0  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 281 CFLTILYYLSNYHIS 237
           CFL +LYY+ + H S
Sbjct: 8   CFLLLLYYIYSKHYS 22


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 356 LIPKVEKYFRYLFVTRQNT 412
           L+PK+ ++F Y  + R+ T
Sbjct: 181 LVPKIAEFFEYRVLPRKVT 199


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = +1

Query: 553 RSATDXPNQTRKENKPNHKMSKGSRHISQEGSKG 654
           RS      + +K ++ +HK + G    +Q+G+ G
Sbjct: 439 RSEKPESKKDKKGSQVDHKNNLGDSKNNQDGNNG 472


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = +1

Query: 553 RSATDXPNQTRKENKPNHKMSKGSRHISQEGSKG 654
           RS      + +K ++ +HK + G    +Q+G+ G
Sbjct: 331 RSEKPESKKDKKGSQVDHKNNLGDSKNNQDGNNG 364


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 486 PTVIRKIILVHLVHQAVGTG 545
           PT + K  + +L+H  +GTG
Sbjct: 102 PTHMEKSAIYNLLHDWLGTG 121


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 486 PTVIRKIILVHLVHQAVGTG 545
           PT + K  + +L+H  +GTG
Sbjct: 102 PTHMEKSAIYNLLHDWLGTG 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,246
Number of Sequences: 336
Number of extensions: 3736
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)