Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060371.seq
         (663 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X90568-1|CAA62188.1|26926|Homo sapiens titin protein.                  34   0.39 
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.                34   0.39 
AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.    34   0.39 
AK131087-1|BAC85137.1|  245|Homo sapiens FLJ00289 protein protein.     31   4.9  
AJ627035-1|CAF25304.1|  553|Homo sapiens polyserase-3 protein.         31   4.9  

>X90568-1|CAA62188.1|26926|Homo sapiens titin protein.
          Length = 26926

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = -1

Query: 552   AXDQFPLPDEPDAPELSYE*QSAHLVGWRYPIIYDFGYPITSF 424
             A D+F +PD PD P ++   + + LV W  P  +D G PIT++
Sbjct: 10508 AKDRFRVPDAPDQPIVTEVTKDSALVTWNKP--HDGGKPITNY 10548



 Score = 31.1 bits (67), Expect = 3.7
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -1

Query: 555  SAXDQFPLPDEPDAPELSYE*QSAHLVGWRYPIIYDFGYPITSF 424
            +A + F +P  PD P +S   +++  V W  P  YD G P+T +
Sbjct: 9812 TARNLFSVPGAPDKPTVSSVTRNSMTVNWEEP-EYDGGSPVTGY 9854


>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
          Length = 30000

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = -1

Query: 552   AXDQFPLPDEPDAPELSYE*QSAHLVGWRYPIIYDFGYPITSF 424
             A D+F +PD PD P ++   + + LV W  P  +D G PIT++
Sbjct: 17932 AKDRFRVPDAPDQPIVTEVTKDSALVTWNKP--HDGGKPITNY 17972



 Score = 31.1 bits (67), Expect = 3.7
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -1

Query: 555   SAXDQFPLPDEPDAPELSYE*QSAHLVGWRYPIIYDFGYPITSF 424
             +A + F +P  PD P +S   +++  V W  P  YD G P+T +
Sbjct: 17236 TARNLFSVPGAPDKPTVSSVTRNSMTVNWEEP-EYDGGSPVTGY 17278


>AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.
          Length = 26926

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = -1

Query: 552   AXDQFPLPDEPDAPELSYE*QSAHLVGWRYPIIYDFGYPITSF 424
             A D+F +PD PD P ++   + + LV W  P  +D G PIT++
Sbjct: 10508 AKDRFRVPDAPDQPIVTEVTKDSALVTWNKP--HDGGKPITNY 10548



 Score = 31.1 bits (67), Expect = 3.7
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -1

Query: 555  SAXDQFPLPDEPDAPELSYE*QSAHLVGWRYPIIYDFGYPITSF 424
            +A + F +P  PD P +S   +++  V W  P  YD G P+T +
Sbjct: 9812 TARNLFSVPGAPDKPTVSSVTRNSMTVNWEEP-EYDGGSPVTGY 9854


>AK131087-1|BAC85137.1|  245|Homo sapiens FLJ00289 protein protein.
          Length = 245

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = -2

Query: 557 LLPSTSSHCLMNQMHQNYLTNNSRPILWAG 468
           L+   + +C+ NQ+HQ +L+N +RP +  G
Sbjct: 204 LISRPTCNCIYNQLHQRHLSNPARPGMLCG 233


>AJ627035-1|CAF25304.1|  553|Homo sapiens polyserase-3 protein.
          Length = 553

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = -2

Query: 557 LLPSTSSHCLMNQMHQNYLTNNSRPILWAG 468
           L+   + +C+ NQ+HQ +L+N +RP +  G
Sbjct: 181 LISRPTCNCIYNQLHQRHLSNPARPGMLCG 210


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,410,944
Number of Sequences: 237096
Number of extensions: 2008886
Number of successful extensions: 10416
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10416
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)