Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060371.seq
         (663 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069578-1|AAL39723.1|  525|Drosophila melanogaster LD31570p pro...    29   5.6  
AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire pro...    29   5.6  
AE014298-2706|AAF48828.1|  525|Drosophila melanogaster CG6205-PA...    29   5.6  
AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-P...    29   5.6  
AE013599-2064|AAF58132.1|  491|Drosophila melanogaster CG12960-P...    29   5.6  
AY119578-1|AAM50232.1|  490|Drosophila melanogaster LD07162p pro...    28   9.9  
AE014134-2563|AAN10889.1|  490|Drosophila melanogaster CG4170-PD...    28   9.9  
AE014134-2562|AAN10888.1|  490|Drosophila melanogaster CG4170-PC...    28   9.9  
AE014134-2561|AAN10887.1|  490|Drosophila melanogaster CG4170-PB...    28   9.9  
AE014134-2560|AAF53437.1|  490|Drosophila melanogaster CG4170-PA...    28   9.9  

>AY069578-1|AAL39723.1|  525|Drosophila melanogaster LD31570p
           protein.
          Length = 525

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = -1

Query: 321 DVRTYLMINLCFFLFSDYSLLLEQLPHFNHLIVSRHPHQHKQLSNFSRCP-LRKFRIFMN 145
           D+R YL++    FL    SLL  QL    +  ++ +    K+   +S CP  R+      
Sbjct: 401 DLRIYLVLISLAFLAEGESLLRRQLASLLNACITANLCPGKERCRYSHCPSKRRLNSLSY 460

Query: 144 YKSRLNN 124
           + +RL N
Sbjct: 461 WLARLTN 467


>AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire protein.
          Length = 5233

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = +1

Query: 382  SLLICYPSEHLK 417
            SLLICYPSEHL+
Sbjct: 3957 SLLICYPSEHLR 3968


>AE014298-2706|AAF48828.1|  525|Drosophila melanogaster CG6205-PA
           protein.
          Length = 525

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = -1

Query: 321 DVRTYLMINLCFFLFSDYSLLLEQLPHFNHLIVSRHPHQHKQLSNFSRCP-LRKFRIFMN 145
           D+R YL++    FL    SLL  QL    +  ++ +    K+   +S CP  R+      
Sbjct: 401 DLRIYLVLISLAFLAEGESLLRRQLASLLNACITANLCPGKERCRYSHCPSKRRLNSLSY 460

Query: 144 YKSRLNN 124
           + +RL N
Sbjct: 461 WLARLTN 467


>AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-PA
            protein.
          Length = 5233

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = +1

Query: 382  SLLICYPSEHLK 417
            SLLICYPSEHL+
Sbjct: 3957 SLLICYPSEHLR 3968


>AE013599-2064|AAF58132.1|  491|Drosophila melanogaster CG12960-PA
           protein.
          Length = 491

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = -1

Query: 354 NPYMYQRNLDDDVRTYLMINLCFFLFSDYSLLLEQ-LPHFNHLIVSRHPHQHK 199
           N Y  Q+ L  +   YL  NLCF  F  +S  L + LPH  HL       QH+
Sbjct: 362 NGYEEQQKLFAEPAFYLATNLCFNQFMLFSPPLRRYLPH-RHLFEDHMMRQHE 413


>AY119578-1|AAM50232.1|  490|Drosophila melanogaster LD07162p
           protein.
          Length = 490

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 571 PNQTRKENKPNHKMSK 618
           PNQ  KENKPN+ ++K
Sbjct: 79  PNQAEKENKPNNALNK 94


>AE014134-2563|AAN10889.1|  490|Drosophila melanogaster CG4170-PD,
           isoform D protein.
          Length = 490

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 571 PNQTRKENKPNHKMSK 618
           PNQ  KENKPN+ ++K
Sbjct: 79  PNQAEKENKPNNALNK 94


>AE014134-2562|AAN10888.1|  490|Drosophila melanogaster CG4170-PC,
           isoform C protein.
          Length = 490

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 571 PNQTRKENKPNHKMSK 618
           PNQ  KENKPN+ ++K
Sbjct: 79  PNQAEKENKPNNALNK 94


>AE014134-2561|AAN10887.1|  490|Drosophila melanogaster CG4170-PB,
           isoform B protein.
          Length = 490

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 571 PNQTRKENKPNHKMSK 618
           PNQ  KENKPN+ ++K
Sbjct: 79  PNQAEKENKPNNALNK 94


>AE014134-2560|AAF53437.1|  490|Drosophila melanogaster CG4170-PA,
           isoform A protein.
          Length = 490

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 571 PNQTRKENKPNHKMSK 618
           PNQ  KENKPN+ ++K
Sbjct: 79  PNQAEKENKPNNALNK 94


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,389,715
Number of Sequences: 53049
Number of extensions: 598963
Number of successful extensions: 1499
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1499
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)