Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060370.seq
(630 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41421 Cluster: Uncharacterized 40.1 kDa protein in PK1... 192 8e-48
UniRef50_Q65359 Cluster: Uncharacterized 37.2 kDa protein; n=8; ... 66 7e-10
UniRef50_Q65360 Cluster: ORF 1173; n=1; Orgyia pseudotsugata sin... 49 1e-04
UniRef50_Q5F9D4 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9
UniRef50_A7HGZ8 Cluster: Heat shock protein DnaJ domain protein;... 34 2.4
UniRef50_Q23E39 Cluster: Putative uncharacterized protein; n=1; ... 33 4.3
UniRef50_Q2YAA0 Cluster: NADH-quinone oxidoreductase; n=2; Bacte... 33 5.7
UniRef50_A3TQX4 Cluster: Putative uncharacterized protein; n=1; ... 33 5.7
UniRef50_A5AAC6 Cluster: Remark: TRRAP is an essential cofactor ... 32 9.9
>UniRef50_P41421 Cluster: Uncharacterized 40.1 kDa protein in
PK1-LEF1 intergenic region; n=5;
Nucleopolyhedrovirus|Rep: Uncharacterized 40.1 kDa
protein in PK1-LEF1 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 340
Score = 192 bits (467), Expect = 8e-48
Identities = 98/144 (68%), Positives = 108/144 (75%)
Frame = +3
Query: 78 VQEYLSXSYVNDMCAXERDVTXMRRFERSAVAPLTKRSR**TRAIPSKAFPIGSAPAKTR 257
VQEYLS SYVN M ERDVT MRR +S + + K+ + ++T
Sbjct: 33 VQEYLSESYVNGMSCIERDVTAMRRL-KSGSCTFDEAVKMIDAGDSIKSLSHWFSTSETM 91
Query: 258 GIDDNVRKVLEQIDAVVPVSVRVQTGRQIFSLNNFEREISQDMLGCLQIILGRFEHFMRN 437
GIDDNVR+VLEQIDAVVPVSVRVQ G QIFSLNNFEREISQDML CLQIILGRFE+FMRN
Sbjct: 92 GIDDNVREVLEQIDAVVPVSVRVQNGWQIFSLNNFEREISQDMLDCLQIILGRFEYFMRN 151
Query: 438 GKLLHIANVFNPNSDAVGWWYNKF 509
GKLL IANVFNPN+D VGWWYNKF
Sbjct: 152 GKLLRIANVFNPNNDVVGWWYNKF 175
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = +2
Query: 509 CVITYVHRIMHRSVPAELVPRLSEAVKKFIRLSKSD 616
CV+TYVHRIM+RSVPAELVPRLSEAVKKFIRL KSD
Sbjct: 176 CVVTYVHRIMYRSVPAELVPRLSEAVKKFIRLRKSD 211
>UniRef50_Q65359 Cluster: Uncharacterized 37.2 kDa protein; n=8;
Nucleopolyhedrovirus|Rep: Uncharacterized 37.2 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 331
Score = 66.1 bits (154), Expect = 7e-10
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Frame = +3
Query: 78 VQEYLSXSYVNDMCAXERDVTXMRRFERSAVAPLTKRSR**TRAIPSKA---FPIGSAPA 248
V E+L+ +YV++ RD+ R + R + ++ F G A
Sbjct: 33 VHEHLTNTYVSNASCVRRDIATARCLNSGHLCFDVARQLLDVSEVAARLSAWFRCGDAT- 91
Query: 249 KTRGIDDNVRKVLEQIDAVVPVSVRVQTGRQIFSLNNFEREISQDMLGCLQIILGRFEHF 428
G+ ++++ L ID P++ RV IF+L+ +I D+ LQ I+GRF HF
Sbjct: 92 ---GLCADMQRALADIDRHAPLARRVGRRANIFALDAIA-DIPSDVTNNLQGIIGRFMHF 147
Query: 429 MRNGKLLHIANVFNPNSDAVGWWYNKF 509
R L +A+VF+P+ A GWWY+KF
Sbjct: 148 PRCSGLARVADVFDPDIRADGWWYHKF 174
>UniRef50_Q65360 Cluster: ORF 1173; n=1; Orgyia pseudotsugata single
capsid nuclopolyhedrovirus|Rep: ORF 1173 - Orgyia
pseudotsugata single capsid nuclear polyhedrosis
virus(OpSNPV)
Length = 388
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = -2
Query: 524 HKLSH-KFIVPPSDSVAIRVEHVGDVQQFSVSHEMFKAAQNNLQAAQHVLRNFSFKIVQR 348
H H KF+VPP+ +R++HVGD +Q + + ++ + A + LQ +V RN ++ ++
Sbjct: 212 HVRQHAKFVVPPTVGSDVRIKHVGDPRQAAAARKVHEPANDALQVVCYVARNVGDRVQRK 271
Query: 347 EYLPSGLNAHADGNHRV 297
+ PS A+A G RV
Sbjct: 272 DVGPS---ANAPGKRRV 285
>UniRef50_Q5F9D4 Cluster: Putative uncharacterized protein; n=1;
Neisseria gonorrhoeae FA 1090|Rep: Putative
uncharacterized protein - Neisseria gonorrhoeae (strain
ATCC 700825 / FA 1090)
Length = 178
Score = 34.7 bits (76), Expect = 1.9
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = -3
Query: 370 SRSKLFKENICRPV*TRTLTGTTASICSNTLRTLSSMPRVFAGAEPMGKAFDGIARVYHL 191
+RSK KENI R + ++ A C +R +++ R + G P FDG A L
Sbjct: 46 ARSKAQKENIARMLSGAKVSEDEALTCGIMMRLVAAKVRRYCGEHP--GVFDGAAGSRQL 103
Query: 190 DRFVK 176
+R++K
Sbjct: 104 ERYIK 108
>UniRef50_A7HGZ8 Cluster: Heat shock protein DnaJ domain protein;
n=2; Anaeromyxobacter|Rep: Heat shock protein DnaJ
domain protein - Anaeromyxobacter sp. Fw109-5
Length = 560
Score = 34.3 bits (75), Expect = 2.4
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = -3
Query: 247 AGAEPMGKAFDGIARVYHLDRFVKGATADLS 155
AG E + +AF +AR +H DRFV TADL+
Sbjct: 368 AGREEVKRAFLALARQFHPDRFVSPETADLA 398
>UniRef50_Q23E39 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 580
Score = 33.5 bits (73), Expect = 4.3
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 439 ENCCTSPTCSTLIA-TLSDGGTINLCDNLCAQ 531
+ C ++ TC T + T GGT NLCD C Q
Sbjct: 412 QTCQSASTCQTCLTNTFGTGGTCNLCDASCGQ 443
>UniRef50_Q2YAA0 Cluster: NADH-quinone oxidoreductase; n=2;
Bacteria|Rep: NADH-quinone oxidoreductase - Nitrosospira
multiformis (strain ATCC 25196 / NCIMB 11849)
Length = 942
Score = 33.1 bits (72), Expect = 5.7
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 391 AACKLFWAALNIS*ETENCCTSPTCSTLIATLSDGGTINLCDNLCAQNNAS 543
AA + WA N+ E C P C++L AT+ GG++ L A N+A+
Sbjct: 514 AAANVTWALCNLGRPAELCYVVPECNSLGATMLGGGSLETA--LEAMNDAA 562
>UniRef50_A3TQX4 Cluster: Putative uncharacterized protein; n=1;
Janibacter sp. HTCC2649|Rep: Putative uncharacterized
protein - Janibacter sp. HTCC2649
Length = 308
Score = 33.1 bits (72), Expect = 5.7
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = -2
Query: 410 QNNLQAAQHVLRNFSFKIVQREYLPSGLNAHA---DGNHRVDL 291
+N LQAA ++L ++F +VQ Y P G+ A A DG VD+
Sbjct: 171 KNMLQAADNLLPRWNFSLVQGSYNPGGVGASAGTHDGGGVVDI 213
>UniRef50_A5AAC6 Cluster: Remark: TRRAP is an essential cofactor for
the tanscription factors c- Myc and E2F; n=13;
Fungi/Metazoa group|Rep: Remark: TRRAP is an essential
cofactor for the tanscription factors c- Myc and E2F -
Aspergillus niger
Length = 3911
Score = 32.3 bits (70), Expect = 9.9
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = -3
Query: 271 LSSMPRVFAGAEPMGKAFDGIARVYHLDRFVKGATADLSKRRIXVTSRSXAHISFTYXS 95
L +P+ F +E AF G+ Y +DR + T+D++K +I + + ++ T S
Sbjct: 678 LLHLPQFFLASEATSPAFSGMVLQYLMDRIHEVGTSDMTKAKILLRMFKLSFMAVTLFS 736
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,397,666
Number of Sequences: 1657284
Number of extensions: 11324852
Number of successful extensions: 32507
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 31425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32493
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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