Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060369.seq
         (666 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY004253-1|AAG13448.1|  717|Homo sapiens PR-domain containing pr...    33   0.69 
AL137784-8|CAI19764.1|  707|Homo sapiens PR domain containing 13...    33   0.69 
AL137784-7|CAI19763.1|  717|Homo sapiens PR domain containing 13...    33   0.69 
AL035087-2|CAI22064.1|  707|Homo sapiens PR domain containing 13...    33   0.69 
AL035087-1|CAI22063.1|  717|Homo sapiens PR domain containing 13...    33   0.69 

>AY004253-1|AAG13448.1|  717|Homo sapiens PR-domain containing
           protein 13 protein.
          Length = 717

 Score = 33.5 bits (73), Expect = 0.69
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +1

Query: 199 GLQYCRHLQRVRHHHANCLVSGDDSLVSPPPPAHPDWDAVS--PLLSL 336
           G  +  H     HHH  CL++GD     PPPP  P   A+   PLLS+
Sbjct: 359 GAGHHHHHHAHHHHHPKCLLAGDPP--PPPPPGLPCSGALRGFPLLSV 404


>AL137784-8|CAI19764.1|  707|Homo sapiens PR domain containing 13
           protein.
          Length = 707

 Score = 33.5 bits (73), Expect = 0.69
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +1

Query: 199 GLQYCRHLQRVRHHHANCLVSGDDSLVSPPPPAHPDWDAVS--PLLSL 336
           G  +  H     HHH  CL++GD     PPPP  P   A+   PLLS+
Sbjct: 349 GAGHHHHHHAHHHHHPKCLLAGDPP--PPPPPGLPCSGALRGFPLLSV 394


>AL137784-7|CAI19763.1|  717|Homo sapiens PR domain containing 13
           protein.
          Length = 717

 Score = 33.5 bits (73), Expect = 0.69
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +1

Query: 199 GLQYCRHLQRVRHHHANCLVSGDDSLVSPPPPAHPDWDAVS--PLLSL 336
           G  +  H     HHH  CL++GD     PPPP  P   A+   PLLS+
Sbjct: 359 GAGHHHHHHAHHHHHPKCLLAGDPP--PPPPPGLPCSGALRGFPLLSV 404


>AL035087-2|CAI22064.1|  707|Homo sapiens PR domain containing 13
           protein.
          Length = 707

 Score = 33.5 bits (73), Expect = 0.69
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +1

Query: 199 GLQYCRHLQRVRHHHANCLVSGDDSLVSPPPPAHPDWDAVS--PLLSL 336
           G  +  H     HHH  CL++GD     PPPP  P   A+   PLLS+
Sbjct: 349 GAGHHHHHHAHHHHHPKCLLAGDPP--PPPPPGLPCSGALRGFPLLSV 394


>AL035087-1|CAI22063.1|  717|Homo sapiens PR domain containing 13
           protein.
          Length = 717

 Score = 33.5 bits (73), Expect = 0.69
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +1

Query: 199 GLQYCRHLQRVRHHHANCLVSGDDSLVSPPPPAHPDWDAVS--PLLSL 336
           G  +  H     HHH  CL++GD     PPPP  P   A+   PLLS+
Sbjct: 359 GAGHHHHHHAHHHHHPKCLLAGDPP--PPPPPGLPCSGALRGFPLLSV 404


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,076,600
Number of Sequences: 237096
Number of extensions: 2056484
Number of successful extensions: 5308
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5289
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7535049140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)