Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060367.seq
         (689 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.2  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   9.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.5  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 510 NKMDSTEPPYSEPRFEEIKKEVSFIHSRRLGYNP 611
           +K+ STE  +  P ++    + S   +RR   NP
Sbjct: 474 DKLSSTEQLFIRPMYDAFLIDQSLALNRRRDENP 507


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 510 NKMDSTEPPYSEPRFEEIKKEVSFIHSRRLGYNP 611
           +K+ STE  +  P ++    + S   +RR   NP
Sbjct: 474 DKLSSTEQLFIRPMYDAFLIDQSLALNRRRDENP 507


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 339 QRFHQEHDHRNLS 377
           + FH+EHD R  S
Sbjct: 260 RHFHEEHDTRRAS 272


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = -1

Query: 671 EGSNMLSPCPSRNGHESDSSW 609
           +G N +  C +R G +  + W
Sbjct: 566 DGGNSMKKCRARYGLDQQNQW 586


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = -1

Query: 671 EGSNMLSPCPSRNGHESDSSW 609
           +G N +  C +R G +  + W
Sbjct: 458 DGGNSMKKCRARYGLDQQNQW 478


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,496
Number of Sequences: 336
Number of extensions: 3625
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)